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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP917368
Clone id YMU001_000100_A03
Library
Length 456
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000100_A03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
AATCTATCGACTGCTAGGCGACATGACAAGAGAATATCAACAAAGCTGTGTATTATCACA
AGTTCGATATCAGGAATCAGGTTCCACCACATCTGGCTTATAATGCCACTACCTTGTAAA
GGCCTTGCTCCAGCCTCTTTGATACGTCTACAAAATGAAGAAGGGCTACTTGCACTCCTT
CGTTCCTGCAAGAGCTATGATGCTATGTGAACAACACTTCGGAAAGAAAATGCCAGTAGT
TTCCTCGATACAATTGCCATGGGAGCCAACTGCTGGGATAGGCTATGTTATATGTTAAAG
TTTGCAAACAGTCAAAGAGTTCCTCTCCAGACTCACGCGATAGCCACAGAATGACTATCA
AGTAAACCGACCGGAGCCACTGCATTTATGGCTGCACCTCTTCTCATCAGTTCGTGATCC
AAAAAGACCACAATAACTGTGATATCGTCATGAAAA
■■Homology search results ■■ -
sp_hit_id Q7XUC5
Definition sp|Q7XUC5|P2C43_ORYSJ Probable protein phosphatase 2C 43 OS=Oryza sativa subsp. japonica
Align length 20
Score (bit) 38.5
E-value 0.014
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917368|Adiantum capillus-veneris mRNA, clone:
YMU001_000100_A03.
         (456 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q7XUC5|P2C43_ORYSJ Probable protein phosphatase 2C 43 OS=Oryz...    39   0.014
sp|Q6ZHC8|P2C25_ORYSJ Probable protein phosphatase 2C 25 OS=Oryz...    38   0.024
sp|Q5Z8P0|P2C60_ORYSJ Probable protein phosphatase 2C 60 OS=Oryz...    34   0.34 
sp|Q2QN36|P2C78_ORYSJ Probable protein phosphatase 2C 78 OS=Oryz...    32   1.3  
sp|Q7Y138|P2C36_ORYSJ Probable protein phosphatase 2C 36 OS=Oryz...    31   2.9  
sp|Q94H98|P2C34_ORYSJ Probable protein phosphatase 2C 34 OS=Oryz...    30   3.8  
sp|Q5MFV5|P2C34_ORYSI Probable protein phosphatase 2C 34 OS=Oryz...    30   3.8  
sp|Q10S32|P2C28_ORYSJ Probable protein phosphatase 2C 28 OS=Oryz...    30   3.8  
sp|Q03EG6|GATB_PEDPA Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransf...    29   8.6  

>sp|Q7XUC5|P2C43_ORYSJ Probable protein phosphatase 2C 43 OS=Oryza
           sativa subsp. japonica GN=Os04g0584366 PE=2 SV=2
          Length = 388

 Score = 38.5 bits (88), Expect = 0.014
 Identities = 15/20 (75%), Positives = 19/20 (95%)
 Frame = -2

Query: 455 FHDDITVIVVFLDHELMRRG 396
           FHDDITV+VVF+DHEL++ G
Sbjct: 341 FHDDITVVVVFIDHELLQDG 360


>sp|Q6ZHC8|P2C25_ORYSJ Probable protein phosphatase 2C 25 OS=Oryza
           sativa subsp. japonica GN=Os02g0685600 PE=2 SV=1
          Length = 387

 Score = 37.7 bits (86), Expect = 0.024
 Identities = 16/35 (45%), Positives = 27/35 (77%), Gaps = 1/35 (2%)
 Frame = -2

Query: 455 FHDDITVIVVFLDHELMR-RGAAINAVAPVGLLDS 354
           FHDDITV+VV++DHEL++ +  ++  ++  G +DS
Sbjct: 340 FHDDITVVVVYIDHELLQEKNVSVPELSVRGFVDS 374


>sp|Q5Z8P0|P2C60_ORYSJ Probable protein phosphatase 2C 60 OS=Oryza
           sativa subsp. japonica GN=Os06g0717800 PE=2 SV=1
          Length = 392

 Score = 33.9 bits (76), Expect = 0.34
 Identities = 15/21 (71%), Positives = 17/21 (80%)
 Frame = -2

Query: 455 FHDDITVIVVFLDHELMRRGA 393
           FHDDITVIVVFLD  L+ R +
Sbjct: 344 FHDDITVIVVFLDSSLVSRAS 364


>sp|Q2QN36|P2C78_ORYSJ Probable protein phosphatase 2C 78 OS=Oryza
           sativa subsp. japonica GN=Os12g0580900 PE=2 SV=1
          Length = 392

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 12/14 (85%), Positives = 14/14 (100%)
 Frame = -2

Query: 455 FHDDITVIVVFLDH 414
           FHDDITV+VV+LDH
Sbjct: 331 FHDDITVVVVYLDH 344


>sp|Q7Y138|P2C36_ORYSJ Probable protein phosphatase 2C 36 OS=Oryza
           sativa subsp. japonica GN=Os03g0832400 PE=2 SV=1
          Length = 386

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 11/20 (55%), Positives = 18/20 (90%)
 Frame = -2

Query: 455 FHDDITVIVVFLDHELMRRG 396
           FHDDITVIV+F++++ + +G
Sbjct: 352 FHDDITVIVLFINYDQLAKG 371


>sp|Q94H98|P2C34_ORYSJ Probable protein phosphatase 2C 34 OS=Oryza
           sativa subsp. japonica GN=BIPP2C2 PE=2 SV=1
          Length = 380

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 19/42 (45%), Positives = 24/42 (57%), Gaps = 6/42 (14%)
 Frame = -2

Query: 455 FHDDITVIVVFLDHELMRRGAAI-----NAV-APVGLLDSHS 348
           FHDDI+VIVV+LD    RR   +     N   APV +  S+S
Sbjct: 324 FHDDISVIVVYLDRHRGRRHTRVVDSSSNCTNAPVDIYSSNS 365


>sp|Q5MFV5|P2C34_ORYSI Probable protein phosphatase 2C 34 OS=Oryza
           sativa subsp. indica GN=BIPP2C2 PE=2 SV=2
          Length = 380

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 19/42 (45%), Positives = 24/42 (57%), Gaps = 6/42 (14%)
 Frame = -2

Query: 455 FHDDITVIVVFLDHELMRRGAAI-----NAV-APVGLLDSHS 348
           FHDDI+VIVV+LD    RR   +     N   APV +  S+S
Sbjct: 324 FHDDISVIVVYLDRHRGRRHTRVVDSSSNCTNAPVDIYSSNS 365


>sp|Q10S32|P2C28_ORYSJ Probable protein phosphatase 2C 28 OS=Oryza
           sativa subsp. japonica GN=Os03g0137200 PE=2 SV=1
          Length = 399

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = -2

Query: 455 FHDDITVIVVFLD 417
           FHDDITVIVVFLD
Sbjct: 345 FHDDITVIVVFLD 357


>sp|Q03EG6|GATB_PEDPA Aspartyl/glutamyl-tRNA(Asn/Gln)
           amidotransferase subunit B OS=Pediococcus pentosaceus
           (strain ATCC 25745 / 183-1w) GN=gatB PE=3 SV=1
          Length = 475

 Score = 29.3 bits (64), Expect = 8.6
 Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
 Frame = +1

Query: 196 YDAM*TTLRKENASSFLDTIAMGANCWDRLCYML----KFANSQRVPLQTHAIATE*LSS 363
           YDAM  T  KE +  F  T+A GA+      Y++     + N Q+V LQ   +  E L+S
Sbjct: 313 YDAMVLTQTKEMSDFFEATVAQGADPKLTANYLMGDVNAYLNDQKVDLQETKLTPEHLAS 372
tr_hit_id A7PVW6
Definition tr|A7PVW6|A7PVW6_VITVI Chromosome chr8 scaffold_34, whole genome shotgun sequence OS=Vitis vinifera
Align length 34
Score (bit) 41.6
E-value 0.02
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917368|Adiantum capillus-veneris mRNA, clone:
YMU001_000100_A03.
         (456 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7PVW6|A7PVW6_VITVI Chromosome chr8 scaffold_34, whole genome...    42   0.020
tr|A5B0L3|A5B0L3_VITVI Putative uncharacterized protein OS=Vitis...    41   0.034
tr|A9SV72|A9SV72_PHYPA Predicted protein OS=Physcomitrella paten...    39   0.099
tr|A9TD47|A9TD47_PHYPA Predicted protein OS=Physcomitrella paten...    39   0.17 
tr|A2XWU4|A2XWU4_ORYSI Putative uncharacterized protein OS=Oryza...    39   0.17 
tr|Q9LSN8|Q9LSN8_ARATH Protein phosphatase 2C-like protein OS=Ar...    38   0.22 
tr|Q8LEW2|Q8LEW2_ARATH Protein phosphatase-2c, putative OS=Arabi...    38   0.22 
tr|Q0V7V2|Q0V7V2_ARATH At3g17090 OS=Arabidopsis thaliana PE=2 SV=1     38   0.22 
tr|B8LQT5|B8LQT5_PICSI Putative uncharacterized protein OS=Picea...    38   0.22 
tr|B8AGR1|B8AGR1_ORYSI Putative uncharacterized protein OS=Oryza...    38   0.29 
tr|A3AA74|A3AA74_ORYSJ Putative uncharacterized protein OS=Oryza...    38   0.29 
tr|Q9ZSQ7|Q9ZSQ7_MESCR Protein phosphatase 2C homolog OS=Mesembr...    37   0.38 
tr|A7Q8V8|A7Q8V8_VITVI Chromosome chr5 scaffold_64, whole genome...    37   0.49 
tr|A7Q8R6|A7Q8R6_VITVI Chromosome chr5 scaffold_64, whole genome...    37   0.49 
tr|A5BQK4|A5BQK4_VITVI Putative uncharacterized protein OS=Vitis...    37   0.49 
tr|B7FLN0|B7FLN0_MEDTR Putative uncharacterized protein OS=Medic...    37   0.64 
tr|B7FJF3|B7FJF3_MEDTR Putative uncharacterized protein OS=Medic...    37   0.64 
tr|A9TNG1|A9TNG1_PHYPA Predicted protein OS=Physcomitrella paten...    36   0.84 
tr|B6TAL6|B6TAL6_MAIZE Catalytic/ protein phosphatase type 2C OS...    36   1.1  
tr|B4FY40|B4FY40_MAIZE Putative uncharacterized protein OS=Zea m...    36   1.1  
tr|Q9SZN2|Q9SZN2_ARATH Putative uncharacterized protein F20M13.8...    35   1.4  
tr|Q9M3V0|Q9M3V0_FAGSY Protein phosphatase 2C (PP2C) OS=Fagus sy...    35   1.4  
tr|Q8W4N8|Q8W4N8_ARATH Putative uncharacterized protein At4g3852...    35   1.4  
tr|Q5PNS9|Q5PNS9_ARATH At4g38520 OS=Arabidopsis thaliana PE=2 SV=1     35   1.4  
tr|A7P8E3|A7P8E3_VITVI Chromosome chr3 scaffold_8, whole genome ...    35   1.4  
tr|A5C806|A5C806_VITVI Putative uncharacterized protein OS=Vitis...    35   1.4  
tr|A9RIX5|A9RIX5_PHYPA Predicted protein OS=Physcomitrella paten...    35   1.9  
tr|A7Q409|A7Q409_VITVI Chromosome chr13 scaffold_48, whole genom...    35   2.4  
tr|B6SYG9|B6SYG9_MAIZE Protein phosphatase 2C OS=Zea mays PE=2 SV=1    34   3.2  
tr|B6SV58|B6SV58_MAIZE Protein phosphatase 2C OS=Zea mays PE=2 SV=1    34   3.2  

>tr|A7PVW6|A7PVW6_VITVI Chromosome chr8 scaffold_34, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00025384001
           PE=4 SV=1
          Length = 390

 Score = 41.6 bits (96), Expect = 0.020
 Identities = 15/34 (44%), Positives = 27/34 (79%)
 Frame = -2

Query: 455 FHDDITVIVVFLDHELMRRGAAINAVAPVGLLDS 354
           FHDDITV+V++LDHE++R+  ++  ++  G +D+
Sbjct: 339 FHDDITVVVIYLDHEVLRKNFSVPELSVRGFIDT 372


>tr|A5B0L3|A5B0L3_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_040860 PE=4 SV=1
          Length = 398

 Score = 40.8 bits (94), Expect = 0.034
 Identities = 15/34 (44%), Positives = 26/34 (76%)
 Frame = -2

Query: 455 FHDDITVIVVFLDHELMRRGAAINAVAPVGLLDS 354
           FHDDITV+V++LDHE +R+  ++  ++  G +D+
Sbjct: 339 FHDDITVVVIYLDHEXLRKNFSVPELSVRGFIDT 372


>tr|A9SV72|A9SV72_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_107052 PE=4 SV=1
          Length = 371

 Score = 39.3 bits (90), Expect = 0.099
 Identities = 16/24 (66%), Positives = 20/24 (83%)
 Frame = -2

Query: 455 FHDDITVIVVFLDHELMRRGAAIN 384
           FHDDITV+VVFLDH L+  G+ I+
Sbjct: 335 FHDDITVVVVFLDHNLVSNGSGIS 358


>tr|A9TD47|A9TD47_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_193911 PE=4 SV=1
          Length = 371

 Score = 38.5 bits (88), Expect = 0.17
 Identities = 15/24 (62%), Positives = 20/24 (83%)
 Frame = -2

Query: 455 FHDDITVIVVFLDHELMRRGAAIN 384
           FHDDITV+VVFLDH L+  G++ +
Sbjct: 335 FHDDITVVVVFLDHNLLSNGSSFS 358


>tr|A2XWU4|A2XWU4_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_17129 PE=4 SV=1
          Length = 388

 Score = 38.5 bits (88), Expect = 0.17
 Identities = 15/20 (75%), Positives = 19/20 (95%)
 Frame = -2

Query: 455 FHDDITVIVVFLDHELMRRG 396
           FHDDITV+VVF+DHEL++ G
Sbjct: 341 FHDDITVVVVFIDHELLQDG 360


>tr|Q9LSN8|Q9LSN8_ARATH Protein phosphatase 2C-like protein
           OS=Arabidopsis thaliana PE=4 SV=1
          Length = 379

 Score = 38.1 bits (87), Expect = 0.22
 Identities = 16/20 (80%), Positives = 19/20 (95%)
 Frame = -2

Query: 455 FHDDITVIVVFLDHELMRRG 396
           FHDDITVIVVFL+H+L+ RG
Sbjct: 342 FHDDITVIVVFLNHDLISRG 361


>tr|Q8LEW2|Q8LEW2_ARATH Protein phosphatase-2c, putative
           OS=Arabidopsis thaliana PE=2 SV=1
          Length = 384

 Score = 38.1 bits (87), Expect = 0.22
 Identities = 16/20 (80%), Positives = 19/20 (95%)
 Frame = -2

Query: 455 FHDDITVIVVFLDHELMRRG 396
           FHDDITVIVVFL+H+L+ RG
Sbjct: 347 FHDDITVIVVFLNHDLISRG 366


>tr|Q0V7V2|Q0V7V2_ARATH At3g17090 OS=Arabidopsis thaliana PE=2 SV=1
          Length = 384

 Score = 38.1 bits (87), Expect = 0.22
 Identities = 16/20 (80%), Positives = 19/20 (95%)
 Frame = -2

Query: 455 FHDDITVIVVFLDHELMRRG 396
           FHDDITVIVVFL+H+L+ RG
Sbjct: 347 FHDDITVIVVFLNHDLISRG 366


>tr|B8LQT5|B8LQT5_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 209

 Score = 38.1 bits (87), Expect = 0.22
 Identities = 21/42 (50%), Positives = 27/42 (64%), Gaps = 4/42 (9%)
 Frame = -2

Query: 455 FHDDITVIVVFLDHELM----RRGAAINAVAPVGLLDSHSVA 342
           FHDDITVIVVFLDH L+     RG  I+ +     + S+S+A
Sbjct: 158 FHDDITVIVVFLDHSLISKFSSRGPTISIIGGGTTVPSNSLA 199


>tr|B8AGR1|B8AGR1_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_08504 PE=4 SV=1
          Length = 247

 Score = 37.7 bits (86), Expect = 0.29
 Identities = 16/35 (45%), Positives = 27/35 (77%), Gaps = 1/35 (2%)
 Frame = -2

Query: 455 FHDDITVIVVFLDHELMR-RGAAINAVAPVGLLDS 354
           FHDDITV+VV++DHEL++ +  ++  ++  G +DS
Sbjct: 200 FHDDITVVVVYIDHELLQEKNVSVPELSVRGFVDS 234