BP917377
Clone id YMU001_000100_A12
Library
Length 437
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000100_A12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
AAGTGGAAGAATTCGCGGCCGCGAATTTTGGTTTTTTTCCATGCATCAAGAAGTGTCAAA
AGTGAAGTGAATGTTTTTATTTCACACTATATACGTGCCACTTCACAACATCCACCCCCT
CTGACCCTCCACATCCTCCAGCATGTGCCAACGTTTCCCTATGTAGGTTTAATCTTCATT
AAGATCCACAAATATTTGGATGTCATTTTCATCTTCTGCAAAGTTGGAAAATCATCCTCT
AATTCTTCATCCTCATATATAGCAATGTCATTGGATTCTTCATCATCATCTTGTTGTGAA
TCAACAAGGATCATTATCATGTCTCCTCTTGAACATCTTGATTCTTTTGCCCGCTATGGG
AATTTTAAGCTCTGTTCCATCGAGATCCCTCAAAGTATATGTAGCATTTCCATGCACATG
TTTGACAACATAGGGGC
■■Homology search results ■■ -
sp_hit_id Q9USY4
Definition sp|Q9USY4|ABP2_SCHPO ARS-binding protein 2 OS=Schizosaccharomyces pombe
Align length 44
Score (bit) 30.0
E-value 3.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917377|Adiantum capillus-veneris mRNA, clone:
YMU001_000100_A12.
(410 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9USY4|ABP2_SCHPO ARS-binding protein 2 OS=Schizosaccharomyce... 30 3.8

>sp|Q9USY4|ABP2_SCHPO ARS-binding protein 2 OS=Schizosaccharomyces
pombe GN=abp2 PE=1 SV=1
Length = 527

Score = 30.0 bits (66), Expect = 3.8
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = +1

Query: 7 FFHASRSVKSEVNVFISHYIRATSQHPPPLTLHILQHVPTFPYV 138
F H +R V+ +SHY SQ+ PP + P F ++
Sbjct: 377 FSHVARLPMETVSQLLSHYTETISQYLPPSETSPIPKTPNFKFI 420


tr_hit_id A9RDD7
Definition tr|A9RDD7|A9RDD7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 38
Score (bit) 54.7
E-value 2.0e-06
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917377|Adiantum capillus-veneris mRNA, clone:
YMU001_000100_A12.
(410 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9RDD7|A9RDD7_PHYPA Predicted protein OS=Physcomitrella paten... 55 2e-06
tr|B8NZN4|B8NZN4_9APHY Predicted protein OS=Postia placenta Mad-... 42 0.012
tr|Q45W58|Q45W58_PHACH Polyprotein (Fragment) OS=Phanerochaete c... 42 0.020
tr|Q1DLK9|Q1DLK9_COCIM Putative uncharacterized protein OS=Cocci... 33 7.1

>tr|A9RDD7|A9RDD7_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_64592 PE=4 SV=1
Length = 203

Score = 54.7 bits (130), Expect = 2e-06
Identities = 22/38 (57%), Positives = 31/38 (81%)
Frame = -3

Query: 408 PYVVKHVHGNATYTLRDLDGTELKIPIAGKRIKMFKRR 295
PY+V +H N TY+L++LDGT LKIPI GK++K+F +R
Sbjct: 125 PYMVTTIHDNTTYSLQELDGTRLKIPIVGKQVKIFNQR 162


>tr|B8NZN4|B8NZN4_9APHY Predicted protein OS=Postia placenta
Mad-698-R GN=POSPLDRAFT_100131 PE=4 SV=1
Length = 186

Score = 42.4 bits (98), Expect = 0.012
Identities = 17/41 (41%), Positives = 28/41 (68%)
Frame = -3

Query: 408 PYVVKHVHGNATYTLRDLDGTELKIPIAGKRIKMFKRRHDN 286
PYV++ H + +Y +R+LDG LK +A R+K+F R+D+
Sbjct: 71 PYVIQERHPSGSYAIRELDGVVLKEAVAASRLKLFYYRNDH 111


>tr|Q45W58|Q45W58_PHACH Polyprotein (Fragment) OS=Phanerochaete
chrysosporium RP-78 GN=pol PE=4 SV=1
Length = 638

Score = 41.6 bits (96), Expect = 0.020
Identities = 18/35 (51%), Positives = 25/35 (71%)
Frame = -3

Query: 408 PYVVKHVHGNATYTLRDLDGTELKIPIAGKRIKMF 304
PYVV H + +Y LR+LDGT +K +AG R+K+F
Sbjct: 514 PYVVHERHESGSYALRELDGTIVKEAVAGSRLKVF 548


>tr|Q1DLK9|Q1DLK9_COCIM Putative uncharacterized protein
OS=Coccidioides immitis GN=CIMG_08804 PE=4 SV=1
Length = 230

Score = 33.1 bits (74), Expect = 7.1
Identities = 17/36 (47%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = -3

Query: 408 PYVVKHVHGN-ATYTLRDLDGTELKIPIAGKRIKMF 304
PY VK + +Y L +LDGTE+K IAG R+K +
Sbjct: 126 PYRVKSANQELGSYHLEELDGTEIKGSIAGSRLKKY 161