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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP917386
Clone id YMU001_000100_B09
Library
Length 546
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000100_B09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TGCTCGTGAGCAGATTCTAGATGTCATGGAACAAGAAATTCGAGAACCAAAGACCGAACA
GAAGGCTAATGCCCCACGTAAAGGCAATTTCTCTGTTCAGCGAGAAATGGTGGGTCGATT
AATCGGACCTCATGGAAGTACTGTGAAGAACATTGAACGAACTACAGGTGTCCGTTTGAG
CATCTCTGAGGATGGGAGAGTTTGCGTTATAGCAAAAGACCAATCCAGCTATGATCAAGC
AAAAGACATGGTTGACTCTGTAATAGGCAAGGAAATTGAGATTGGAAACATCTATAGTGG
GTGTGTTACTCAAATAAGAGACTTTGGGGCCTTTGTTGAGATAGAAGGAGGGCATCAGGG
GCTTCTCCATATATCTGAACTTTCGCATCAAAGGGTGGCCCAGGTAACAGATGCTGTAAT
GTTAGGGCAGAAATTGAGTGTCATGTGCATAGGAAGAGATACAAAGGGAAACATAAAGCT
GTCCTTGAAGGCAACAATGCCTCTGTCAACAGCGTGACAGAACAGAGAAATCAGGCCGCT
CGAGCG
■■Homology search results ■■ -
sp_hit_id Q822C1
Definition sp|Q822C1|PNP_CHLCV Polyribonucleotide nucleotidyltransferase OS=Chlamydophila caviae
Align length 165
Score (bit) 125.0
E-value 1.0e-28
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917386|Adiantum capillus-veneris mRNA, clone:
YMU001_000100_B09.
         (546 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q822C1|PNP_CHLCV Polyribonucleotide nucleotidyltransferase OS...   125   1e-28
sp|Q3ABA6|PNP_CARHZ Polyribonucleotide nucleotidyltransferase OS...   124   4e-28
sp|Q8RA43|PNP_THETN Polyribonucleotide nucleotidyltransferase OS...   123   7e-28
sp|O84849|PNP_CHLTR Polyribonucleotide nucleotidyltransferase OS...   123   7e-28
sp|Q3KKJ7|PNP_CHLTA Polyribonucleotide nucleotidyltransferase OS...   123   7e-28
sp|Q5L5B4|PNP_CHLAB Polyribonucleotide nucleotidyltransferase OS...   122   9e-28
sp|Q3ZXV6|PNP_DEHSC Polyribonucleotide nucleotidyltransferase OS...   122   1e-27
sp|Q21YD1|PNP_RHOFD Polyribonucleotide nucleotidyltransferase OS...   121   2e-27
sp|A5FQT2|PNP_DEHSB Polyribonucleotide nucleotidyltransferase OS...   121   2e-27
sp|Q3Z7V6|PNP_DEHE1 Polyribonucleotide nucleotidyltransferase OS...   121   2e-27
sp|A1TLL2|PNP_ACIAC Polyribonucleotide nucleotidyltransferase OS...   121   2e-27
sp|Q127W8|PNP_POLSJ Polyribonucleotide nucleotidyltransferase OS...   120   3e-27
sp|Q24UJ4|PNP_DESHY Polyribonucleotide nucleotidyltransferase OS...   120   3e-27
sp|Q9PL77|PNP_CHLMU Polyribonucleotide nucleotidyltransferase OS...   120   3e-27
sp|A1W4L8|PNP_ACISJ Polyribonucleotide nucleotidyltransferase OS...   120   3e-27
sp|A5URV5|PNP_ROSS1 Polyribonucleotide nucleotidyltransferase OS...   120   6e-27
sp|Q255L4|PNP_CHLFF Polyribonucleotide nucleotidyltransferase OS...   120   6e-27
sp|Q732R5|PNP_BACC1 Polyribonucleotide nucleotidyltransferase OS...   120   6e-27
sp|Q92C23|PNP_LISIN Polyribonucleotide nucleotidyltransferase OS...   119   7e-27
sp|A9WEJ7|PNP_CHLAA Polyribonucleotide nucleotidyltransferase OS...   119   7e-27
sp|A6TM05|PNP2_ALKMQ Polyribonucleotide nucleotidyltransferase 2...   119   9e-27
sp|A6TM00|PNP1_ALKMQ Polyribonucleotide nucleotidyltransferase 1...   119   9e-27
sp|A1VM56|PNP_POLNA Polyribonucleotide nucleotidyltransferase OS...   118   2e-26
sp|Q32BG9|PNP_SHIDS Polyribonucleotide nucleotidyltransferase OS...   118   2e-26
sp|Q6HF08|PNP_BACHK Polyribonucleotide nucleotidyltransferase OS...   118   2e-26
sp|Q636L9|PNP_BACCZ Polyribonucleotide nucleotidyltransferase OS...   118   2e-26
sp|A7GRD7|PNP_BACCN Polyribonucleotide nucleotidyltransferase OS...   118   2e-26
sp|Q81WM8|PNP_BACAN Polyribonucleotide nucleotidyltransferase OS...   118   2e-26
sp|A0RHH8|PNP_BACAH Polyribonucleotide nucleotidyltransferase OS...   118   2e-26
sp|Q04ZJ9|PNP_LEPBL Polyribonucleotide nucleotidyltransferase OS...   117   3e-26

>sp|Q822C1|PNP_CHLCV Polyribonucleotide nucleotidyltransferase
            OS=Chlamydophila caviae GN=pnp PE=3 SV=1
          Length = 694

 Score =  125 bits (315), Expect = 1e-28
 Identities = 66/165 (40%), Positives = 98/165 (59%)
 Frame = +2

Query: 5    REQILDVMEQEIREPKTEQKANAPRKGNFSVQREMVGRLIGPHGSTVKNIERTTGVRLSI 184
            R+ ILD+M++ +  PKT+    APR     ++   +  +IGP G  ++ I    GV++ I
Sbjct: 529  RQHILDIMKEALAAPKTDLSQYAPRIETMQIKPNKIATVIGPGGKQIRQIIEEAGVQIDI 588

Query: 185  SEDGRVCVIAKDQSSYDQAKDMVDSVIGKEIEIGNIYSGCVTQIRDFGAFVEIEGGHQGL 364
            ++ G V + A    + ++AK M++ ++G E+E+G IY G VT I  FGAFVEI  G +GL
Sbjct: 589  NDSGLVSISASSPQAIEKAKSMIEGLVG-EVEVGKIYEGRVTSIVPFGAFVEILPGKEGL 647

Query: 365  LHISELSHQRVAQVTDAVMLGQKLSVMCIGRDTKGNIKLSLKATM 499
             HISE S QR+  V D V  G  L+V  +  + KG  KLS KAT+
Sbjct: 648  CHISEFSKQRIENVGDFVKQGDILAVKLLSINEKGQYKLSHKATL 692


>sp|Q3ABA6|PNP_CARHZ Polyribonucleotide nucleotidyltransferase
            OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
            6008) GN=pnp PE=3 SV=1
          Length = 731

 Score =  124 bits (310), Expect = 4e-28
 Identities = 70/172 (40%), Positives = 105/172 (61%), Gaps = 6/172 (3%)
 Frame = +2

Query: 5    REQILDVMEQEIREPKTEQKANAPRKGNFSVQREMVGRLIGPHGSTVKNIERTTGVRLSI 184
            R  IL  M + I EP+ E    APR    +V  E +  +IGP G  +K I   TGV++ I
Sbjct: 541  RMHILGKMLEVISEPRKELSPYAPRIIFTTVDPEKIRDIIGPGGKIIKKIIDETGVKIDI 600

Query: 185  SEDGRVCVIAKDQSSYDQAKDMVDSVIGKEIEIGNIYSGCVTQIRDFGAFVEIE------ 346
             +DGR+ + A D+ + ++A +++++ + KEIE+G +Y G VT+I DFGAFVE+       
Sbjct: 601  EDDGRIFIAAVDKEAGEKALNIIEN-LTKEIEVGKVYLGKVTRIADFGAFVEVVPGVLGL 659

Query: 347  GGHQGLLHISELSHQRVAQVTDAVMLGQKLSVMCIGRDTKGNIKLSLKATMP 502
             G +GL+HIS+L+H RV +V D V  G ++ V  IG D +G +KLS K  +P
Sbjct: 660  PGKEGLVHISQLAHSRVKRVEDVVKEGDQILVKAIGYDNQGRLKLSRKDAIP 711


>sp|Q8RA43|PNP_THETN Polyribonucleotide nucleotidyltransferase
            OS=Thermoanaerobacter tengcongensis GN=pnp PE=3 SV=1
          Length = 707

 Score =  123 bits (308), Expect = 7e-28
 Identities = 72/176 (40%), Positives = 101/176 (57%)
 Frame = +2

Query: 2    AREQILDVMEQEIREPKTEQKANAPRKGNFSVQREMVGRLIGPHGSTVKNIERTTGVRLS 181
            AR  +L  M + I+EP+ E    APR     V  E +  +IGP G T+  I   TGV++ 
Sbjct: 527  ARLYVLQKMLEVIKEPRKELSKYAPRVVRMVVNPEKIRDIIGPAGKTITKIISETGVKID 586

Query: 182  ISEDGRVCVIAKDQSSYDQAKDMVDSVIGKEIEIGNIYSGCVTQIRDFGAFVEIEGGHQG 361
            I EDGR+ + A +  + ++AK M++++  K+IE+G IY G V +I  FGAFVEI  G +G
Sbjct: 587  IEEDGRLYITAPNLEAGERAKQMIEAIT-KDIEVGGIYLGKVLRIAPFGAFVEIAPGKEG 645

Query: 362  LLHISELSHQRVAQVTDAVMLGQKLSVMCIGRDTKGNIKLSLKATMPLSTA*QNRE 529
            L+HIS LS +RV +V D V +G  + V     D  G I LS K  MP      NR+
Sbjct: 646  LVHISNLSKKRVRRVEDVVKVGDNILVKVTEIDKLGRIVLSRKDAMPDEEESDNRK 701


>sp|O84849|PNP_CHLTR Polyribonucleotide nucleotidyltransferase
            OS=Chlamydia trachomatis GN=pnp PE=3 SV=1
          Length = 695

 Score =  123 bits (308), Expect = 7e-28
 Identities = 63/165 (38%), Positives = 99/165 (60%)
 Frame = +2

Query: 5    REQILDVMEQEIREPKTEQKANAPRKGNFSVQREMVGRLIGPHGSTVKNIERTTGVRLSI 184
            R  IL++M Q +  PK      APR     +    +  +IGP G  ++ I   +G ++ I
Sbjct: 530  RSHILNLMTQVLASPKGTVSKYAPRIETMQINTSKIATVIGPGGKQIRQIIERSGAQVDI 589

Query: 185  SEDGRVCVIAKDQSSYDQAKDMVDSVIGKEIEIGNIYSGCVTQIRDFGAFVEIEGGHQGL 364
            ++DG + + A  Q S ++AK++++ + G E+E+G +Y+G VT I  FG FVE+  G +GL
Sbjct: 590  NDDGVINIAASTQESINKAKELIEGLTG-EVEVGKVYNGRVTSIATFGVFVEVLPGKEGL 648

Query: 365  LHISELSHQRVAQVTDAVMLGQKLSVMCIGRDTKGNIKLSLKATM 499
             HISELS Q+V  ++D V  G KL+V  +  + KG +KLS KAT+
Sbjct: 649  CHISELSKQKVDNISDFVKEGDKLAVKLLSINEKGQLKLSHKATL 693


>sp|Q3KKJ7|PNP_CHLTA Polyribonucleotide nucleotidyltransferase
            OS=Chlamydia trachomatis (strain A/HAR-13 / ATCC VR-571B)
            GN=pnp PE=3 SV=1
          Length = 695

 Score =  123 bits (308), Expect = 7e-28
 Identities = 63/165 (38%), Positives = 99/165 (60%)
 Frame = +2

Query: 5    REQILDVMEQEIREPKTEQKANAPRKGNFSVQREMVGRLIGPHGSTVKNIERTTGVRLSI 184
            R  IL++M Q +  PK      APR     +    +  +IGP G  ++ I   +G ++ I
Sbjct: 530  RSHILNLMTQVLASPKGTVSKYAPRIETMQINTSKIATVIGPGGKQIRQIIERSGAQVDI 589

Query: 185  SEDGRVCVIAKDQSSYDQAKDMVDSVIGKEIEIGNIYSGCVTQIRDFGAFVEIEGGHQGL 364
            ++DG + + A  Q S ++AK++++ + G E+E+G +Y+G VT I  FG FVE+  G +GL
Sbjct: 590  NDDGVINIAASTQESINKAKELIEGLTG-EVEVGKVYNGRVTSIATFGVFVEVLPGKEGL 648

Query: 365  LHISELSHQRVAQVTDAVMLGQKLSVMCIGRDTKGNIKLSLKATM 499
             HISELS Q+V  ++D V  G KL+V  +  + KG +KLS KAT+
Sbjct: 649  CHISELSKQKVDNISDFVKEGDKLAVKLLSINEKGQLKLSHKATL 693


>sp|Q5L5B4|PNP_CHLAB Polyribonucleotide nucleotidyltransferase
            OS=Chlamydophila abortus GN=pnp PE=3 SV=1
          Length = 694

 Score =  122 bits (307), Expect = 9e-28
 Identities = 64/165 (38%), Positives = 97/165 (58%)
 Frame = +2

Query: 5    REQILDVMEQEIREPKTEQKANAPRKGNFSVQREMVGRLIGPHGSTVKNIERTTGVRLSI 184
            R+ IL+ M+Q +  PKT+    APR     ++   +  +IGP G  ++ I    GV++ I
Sbjct: 529  RQDILETMKQALAAPKTDLSQYAPRIETMQIKPNKIATVIGPGGKQIRQIIEEAGVQIDI 588

Query: 185  SEDGRVCVIAKDQSSYDQAKDMVDSVIGKEIEIGNIYSGCVTQIRDFGAFVEIEGGHQGL 364
            ++ G V + A    + ++AK +++ ++G E+E+G IY G VT +  FGAFVEI  G +GL
Sbjct: 589  NDSGLVSISASSPQAIEKAKSIIEGLVG-EVEVGKIYEGRVTSVVPFGAFVEILPGKEGL 647

Query: 365  LHISELSHQRVAQVTDAVMLGQKLSVMCIGRDTKGNIKLSLKATM 499
             HISE S QR+  V D V  G  L+V  +  + KG  KLS KAT+
Sbjct: 648  CHISEFSKQRIDNVGDFVKQGDTLTVKLLSINEKGQYKLSHKATL 692


>sp|Q3ZXV6|PNP_DEHSC Polyribonucleotide nucleotidyltransferase
            OS=Dehalococcoides sp. (strain CBDB1) GN=pnp PE=3 SV=1
          Length = 720

 Score =  122 bits (305), Expect = 1e-27
 Identities = 70/184 (38%), Positives = 110/184 (59%), Gaps = 5/184 (2%)
 Frame = +2

Query: 2    AREQILDVMEQEIREPKTEQKANAPRKGNFSVQREMVGRLIGPHGSTVKNIERTTGVRLS 181
            AR  ILDVM++ + +PKTE    APR    ++    +G +IG  G T+++I   T   + 
Sbjct: 527  ARYNILDVMDKALAQPKTELSPYAPRMYKINIDPSKIGSVIGSGGKTIRSIIEQTNTTVD 586

Query: 182  ISEDGRVCVIAKDQSSYDQAKDMVDSVIGKEIEIGNIYSGCVTQIRDFGAFVEIEGGHQG 361
            I  DG V + A D++S  +A  +++ +  K+IE G+IY+G VT+I  FGAFVEI  G +G
Sbjct: 587  IENDGTVVIGATDEASAKKAIKIIEDLT-KDIEAGSIYTGKVTRIMTFGAFVEILPGKEG 645

Query: 362  LLHISELSHQRVAQVTDAVMLGQKLSVMCIGRDTKGNIKLSLKA-----TMPLSTA*QNR 526
            ++HISEL+  RV +V D V +G  ++V  I  D +G + LS +       +P+S   +NR
Sbjct: 646  MVHISELADHRVEKVEDIVKVGDDITVKVIEIDNQGRVNLSHRVILNPNAVPIS---RNR 702

Query: 527  EIRP 538
            + +P
Sbjct: 703  DSQP 706


>sp|Q21YD1|PNP_RHOFD Polyribonucleotide nucleotidyltransferase
            OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC
            BAA-621 / T118) GN=pnp PE=3 SV=1
          Length = 706

 Score =  121 bits (303), Expect = 2e-27
 Identities = 63/166 (37%), Positives = 98/166 (59%)
 Frame = +2

Query: 2    AREQILDVMEQEIREPKTEQKANAPRKGNFSVQREMVGRLIGPHGSTVKNIERTTGVRLS 181
            AR  IL  M++ + E KTE    APR     +  + +  +IG  GS ++ +   TG +++
Sbjct: 531  ARMHILGKMQEAMAEAKTEVSTFAPRLFTMKINPDKIRDVIGKGGSVIRALTEETGTQIN 590

Query: 182  ISEDGRVCVIAKDQSSYDQAKDMVDSVIGKEIEIGNIYSGCVTQIRDFGAFVEIEGGHQG 361
            I EDG + + + D +  ++AK  +  +   E+EIG IY G +T+I DFGA V +  G  G
Sbjct: 591  IDEDGTITIASADPAKAEEAKRRIQQITA-EVEIGKIYEGPITKILDFGALVNLLPGKDG 649

Query: 362  LLHISELSHQRVAQVTDAVMLGQKLSVMCIGRDTKGNIKLSLKATM 499
            LLHIS+++H+RV +VTD +  GQ + V  +  D KG IKLS+K  +
Sbjct: 650  LLHISQIAHERVEKVTDYLSEGQIVKVKVMETDEKGRIKLSMKVLL 695


>sp|A5FQT2|PNP_DEHSB Polyribonucleotide nucleotidyltransferase
            OS=Dehalococcoides sp. (strain BAV1) GN=pnp PE=3 SV=1
          Length = 720

 Score =  121 bits (303), Expect = 2e-27
 Identities = 70/184 (38%), Positives = 110/184 (59%), Gaps = 5/184 (2%)
 Frame = +2

Query: 2    AREQILDVMEQEIREPKTEQKANAPRKGNFSVQREMVGRLIGPHGSTVKNIERTTGVRLS 181
            AR  ILDVM++ + +PKTE    APR    ++    +G +IG  G T+++I   T   + 
Sbjct: 527  ARYNILDVMDKALAQPKTELSPYAPRMYKINIDPSKIGSVIGSGGKTIRSIIEQTNTTVD 586

Query: 182  ISEDGRVCVIAKDQSSYDQAKDMVDSVIGKEIEIGNIYSGCVTQIRDFGAFVEIEGGHQG 361
            I  DG V + A D++S  +A  +++ +  K+IE G+IY+G VT+I  FGAFVEI  G +G
Sbjct: 587  IENDGTVVIGAIDEASAKKAIKIIEDLT-KDIEAGSIYTGKVTRIMTFGAFVEILPGKEG 645

Query: 362  LLHISELSHQRVAQVTDAVMLGQKLSVMCIGRDTKGNIKLSLKA-----TMPLSTA*QNR 526
            ++HISEL+  RV +V D V +G  ++V  I  D +G + LS +       +P+S   +NR
Sbjct: 646  MVHISELADHRVEKVEDIVKVGDDITVKVIEIDNQGRVNLSHRVILNPNAVPIS---RNR 702

Query: 527  EIRP 538
            + +P
Sbjct: 703  DSQP 706


>sp|Q3Z7V6|PNP_DEHE1 Polyribonucleotide nucleotidyltransferase
            OS=Dehalococcoides ethenogenes (strain 195) GN=pnp PE=3
            SV=1
          Length = 720

 Score =  121 bits (303), Expect = 2e-27
 Identities = 68/184 (36%), Positives = 111/184 (60%), Gaps = 5/184 (2%)
 Frame = +2

Query: 2    AREQILDVMEQEIREPKTEQKANAPRKGNFSVQREMVGRLIGPHGSTVKNIERTTGVRLS 181
            AR  IL+VM++ + +PKTE    APR    S+    +G +IG  G T+++I   T   + 
Sbjct: 527  ARYTILEVMDKALAQPKTELSPYAPRMYKISIDPSKIGSVIGSGGKTIRSIIEQTNTTVD 586

Query: 182  ISEDGRVCVIAKDQSSYDQAKDMVDSVIGKEIEIGNIYSGCVTQIRDFGAFVEIEGGHQG 361
            I  DG V + A D++S  +A  +++ +  K++E G++Y+G VT+I  FGAFVEI  G +G
Sbjct: 587  IENDGTVVIGATDEASAQKAIKIIEDLT-KDVEAGSVYTGKVTRIMTFGAFVEILPGKEG 645

Query: 362  LLHISELSHQRVAQVTDAVMLGQKLSVMCIGRDTKGNIKLSLKA-----TMPLSTA*QNR 526
            ++HISEL+  RV +V D V +G +++V     D++G I LS +       +P+S   +NR
Sbjct: 646  MVHISELADHRVEKVEDVVKVGDEITVKVTEIDSQGRINLSRRVILNPNAVPIS---RNR 702

Query: 527  EIRP 538
            + +P
Sbjct: 703  DSQP 706
tr_hit_id A9TVK9
Definition tr|A9TVK9|A9TVK9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 168
Score (bit) 193.0
E-value 6.0e-48
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917386|Adiantum capillus-veneris mRNA, clone:
YMU001_000100_B09.
         (546 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9TVK9|A9TVK9_PHYPA Predicted protein OS=Physcomitrella paten...   193   6e-48
tr|A7PM62|A7PM62_VITVI Chromosome chr14 scaffold_21, whole genom...   184   3e-45
tr|B7ZZV8|B7ZZV8_MAIZE Putative uncharacterized protein OS=Zea m...   159   9e-38
tr|Q6KAI0|Q6KAI0_ORYSJ Putative polyribonucleotide nucleotidyltr...   156   8e-37
tr|B8AFG8|B8AFG8_ORYSI Putative uncharacterized protein OS=Oryza...   156   8e-37
tr|A3A938|A3A938_ORYSJ Putative uncharacterized protein OS=Oryza...   156   8e-37
tr|Q9S7G6|Q9S7G6_ARATH Polynucleotide phosphorylase (Polynucleot...   153   7e-36
tr|A4RT74|A4RT74_OSTLU Predicted protein OS=Ostreococcus lucimar...   134   2e-30
tr|B4D3R8|B4D3R8_9BACT Polyribonucleotide nucleotidyltransferase...   133   7e-30
tr|B3DZ86|B3DZ86_METI4 Polyribonucleotide nucleotidyltransferase...   132   9e-30
tr|Q01E21|Q01E21_OSTTA Putative polyribonucleotide nucleotidyltr...   129   1e-28
tr|A6DU91|A6DU91_9BACT Polynucleotide phosphorylase/polyadenylas...   126   9e-28
tr|A9BNB8|A9BNB8_DELAS Polyribonucleotide nucleotidyltransferase...   124   4e-27
tr|Q2B0B2|Q2B0B2_9BACI PnpA OS=Bacillus sp. NRRL B-14911 GN=B149...   123   6e-27
tr|Q1PVN2|Q1PVN2_9BACT Stronly similar to polynucleotide phospho...   123   6e-27
tr|Q0DZI0|Q0DZI0_ORYSJ Os02g0617700 protein (Fragment) OS=Oryza ...   123   6e-27
tr|B0BAV0|B0BAV0_CHLTB Polyribonucleotide nucleotidyltransferase...   123   7e-27
tr|B0B971|B0B971_CHLT2 Polyribonucleotide nucleotidyltransferase...   123   7e-27
tr|B7R8T1|B7R8T1_9THEO 3' exoribonuclease family, domain 2, prot...   123   7e-27
tr|A8SN93|A8SN93_9FIRM Putative uncharacterized protein OS=Parvi...   122   1e-26
tr|B0K9P4|B0K9P4_THEP3 Polyribonucleotide nucleotidyltransferase...   122   2e-26
tr|B0K1D0|B0K1D0_THEPX Polyribonucleotide nucleotidyltransferase...   122   2e-26
tr|B1ZS98|B1ZS98_OPITP Polyribonucleotide nucleotidyltransferase...   121   2e-26
tr|B8FR00|B8FR00_DESHD Polyribonucleotide nucleotidyltransferase...   121   2e-26
tr|B7YTR5|B7YTR5_VARPD Polyribonucleotide nucleotidyltransferase...   121   2e-26
tr|B2UNA9|B2UNA9_AKKM8 Polyribonucleotide nucleotidyltransferase...   121   3e-26
tr|B0THS2|B0THS2_HELMI Polyribonucleotide nucleotidyltransferase...   121   3e-26
tr|A8CNM3|A8CNM3_9CHLR Polyribonucleotide nucleotidyltransferase...   121   3e-26
tr|B7D1V3|B7D1V3_9BURK Polyribonucleotide nucleotidyltransferase...   120   4e-26
tr|B1SQQ0|B1SQQ0_9BACI 3' exoribonuclease OS=Geobacillus sp. WCH...   120   4e-26

>tr|A9TVK9|A9TVK9_PHYPA Predicted protein OS=Physcomitrella patens
            subsp. patens GN=PHYPADRAFT_151398 PE=4 SV=1
          Length = 817

 Score =  193 bits (490), Expect = 6e-48
 Identities = 89/168 (52%), Positives = 129/168 (76%), Gaps = 1/168 (0%)
 Frame = +2

Query: 5    REQILDVMEQEIREPK-TEQKANAPRKGNFSVQREMVGRLIGPHGSTVKNIERTTGVRLS 181
            R QILD MEQ I  P+ +  + N PR G  ++Q++ +GRLIGP GS +KNI++ +  R++
Sbjct: 619  RTQILDFMEQVISSPRDSTARENLPRSGTMNIQQDSIGRLIGPQGSNIKNIQKVSDARIN 678

Query: 182  ISEDGRVCVIAKDQSSYDQAKDMVDSVIGKEIEIGNIYSGCVTQIRDFGAFVEIEGGHQG 361
            IS DG V + A+DQ+S+D AK MV++ +GKE+E+G  YS  V  I+DFGAF+E+ GG+QG
Sbjct: 679  ISGDGVVTIFARDQASFDLAKQMVEASVGKEVEVGGTYSARVVAIKDFGAFMELNGGYQG 738

Query: 362  LLHISELSHQRVAQVTDAVMLGQKLSVMCIGRDTKGNIKLSLKATMPL 505
            LLHISE++H+R+ +V+D + +GQ+LSV+CIGRD +GN+KLS K T+PL
Sbjct: 739  LLHISEIAHERIERVSDYLSIGQELSVVCIGRDLRGNLKLSRKMTLPL 786


>tr|A7PM62|A7PM62_VITVI Chromosome chr14 scaffold_21, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00020698001
           PE=4 SV=1
          Length = 857

 Score =  184 bits (466), Expect = 3e-45
 Identities = 88/166 (53%), Positives = 122/166 (73%)
 Frame = +2

Query: 5   REQILDVMEQEIREPKTEQKANAPRKGNFSVQREMVGRLIGPHGSTVKNIERTTGVRLSI 184
           R QILD MEQEI  P+T+   N+PR        + + RL+GP G+  + IE  TG R+S+
Sbjct: 462 RLQILDRMEQEINAPRTQHYRNSPRLATLKFSNDSLRRLLGPMGALKRKIEEETGARISV 521

Query: 185 SEDGRVCVIAKDQSSYDQAKDMVDSVIGKEIEIGNIYSGCVTQIRDFGAFVEIEGGHQGL 364
           S DG + V+AK+QS  D+ ++ VD ++G+EIEIG IY G VT ++++GAFVE  GG QGL
Sbjct: 522 S-DGTLTVVAKNQSVMDKVQEKVDFIVGREIEIGGIYKGVVTSVKEYGAFVEFNGGQQGL 580

Query: 365 LHISELSHQRVAQVTDAVMLGQKLSVMCIGRDTKGNIKLSLKATMP 502
           LHISELSH+ V +V+D V +GQ++S+MCIG+D +GNIKLSLK+T+P
Sbjct: 581 LHISELSHEPVVRVSDVVSIGQQISLMCIGQDVRGNIKLSLKSTLP 626



 Score = 37.4 bits (85), Expect = 0.52
 Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 4/108 (3%)
 Frame = +2

Query: 176  LSISEDGRV---CVIAKDQSSYDQAKDMVDSVIG-KEIEIGNIYSGCVTQIRDFGAFVEI 343
            LS+ EDG        A  Q+  +  K++ ++  G K +++G   +  V QIR  G  +++
Sbjct: 752  LSMGEDGDKHGSAFNANSQNDLNDTKEVPETCTGAKNLKLGMKLNAKVYQIRTHGLVLDL 811

Query: 344  EGGHQGLLHISELSHQRVAQVTDAVMLGQKLSVMCIGRDTKGNIKLSL 487
             GG +G+      + +R  +V      G +L VMC    TKG   +SL
Sbjct: 812  GGGIRGMYRFEGDNDKRDFKV------GDELHVMCSSFSTKGIPVMSL 853


>tr|B7ZZV8|B7ZZV8_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 733

 Score =  159 bits (402), Expect = 9e-38
 Identities = 85/167 (50%), Positives = 113/167 (67%)
 Frame = +2

Query: 2   AREQILDVMEQEIREPKTEQKANAPRKGNFSVQREMVGRLIGPHGSTVKNIERTTGVRLS 181
           AR QILD M+QEI   +     ++PR    S   E + +L+       K IE+ TG R+S
Sbjct: 351 ARNQILDRMDQEISTARGINDGSSPRLATLSFSNESLRKLLFHR----KKIEQETGARVS 406

Query: 182 ISEDGRVCVIAKDQSSYDQAKDMVDSVIGKEIEIGNIYSGCVTQIRDFGAFVEIEGGHQG 361
           IS DG V ++AK Q   D+A + V+ ++G+EIE+G  Y G V+ I+++GAFVE  GG QG
Sbjct: 407 IS-DGTVTIVAKTQEIMDKAIEKVEFLVGREIEVGRTYKGIVSSIKEYGAFVEFNGGQQG 465

Query: 362 LLHISELSHQRVAQVTDAVMLGQKLSVMCIGRDTKGNIKLSLKATMP 502
           LLHISELSHQ V +V+D V LGQ LS+ CIG+D +GNIKLSLKAT+P
Sbjct: 466 LLHISELSHQPVTKVSDVVTLGQSLSLRCIGQDMRGNIKLSLKATLP 512


>tr|Q6KAI0|Q6KAI0_ORYSJ Putative polyribonucleotide
            nucleotidyltransferase OS=Oryza sativa subsp. japonica
            GN=OJ1014_H03.14 PE=4 SV=1
          Length = 982

 Score =  156 bits (394), Expect = 8e-37
 Identities = 81/167 (48%), Positives = 114/167 (68%)
 Frame = +2

Query: 2    AREQILDVMEQEIREPKTEQKANAPRKGNFSVQREMVGRLIGPHGSTVKNIERTTGVRLS 181
            AR QILD M+QEI   +     ++PR    S   + + +L+       K IE+ TG R+S
Sbjct: 600  ARNQILDRMDQEISSARAFNDGSSPRLATLSFSSDSLRKLLFHR----KKIEQETGARVS 655

Query: 182  ISEDGRVCVIAKDQSSYDQAKDMVDSVIGKEIEIGNIYSGCVTQIRDFGAFVEIEGGHQG 361
            +S DG V ++AK Q   D+A + V+ ++G+EIE+G  Y G V+ I+++GAFVE  GG QG
Sbjct: 656  VS-DGTVTIVAKTQPIMDKAIEKVEFLVGREIEVGRTYKGVVSSIKEYGAFVEFNGGQQG 714

Query: 362  LLHISELSHQRVAQVTDAVMLGQKLSVMCIGRDTKGNIKLSLKATMP 502
            LLHISELSH +V++V+D V +GQ LS+ CIG+D +GNIKLSLKAT+P
Sbjct: 715  LLHISELSHDKVSKVSDVVSVGQVLSLTCIGQDLRGNIKLSLKATLP 761


>tr|B8AFG8|B8AFG8_ORYSI Putative uncharacterized protein OS=Oryza
            sativa subsp. indica GN=OsI_08089 PE=4 SV=1
          Length = 1030

 Score =  156 bits (394), Expect = 8e-37
 Identities = 81/167 (48%), Positives = 114/167 (68%)
 Frame = +2

Query: 2    AREQILDVMEQEIREPKTEQKANAPRKGNFSVQREMVGRLIGPHGSTVKNIERTTGVRLS 181
            AR QILD M+QEI   +     ++PR    S   + + +L+       K IE+ TG R+S
Sbjct: 648  ARNQILDRMDQEISSARAFNDGSSPRLATLSFSSDSLRKLLFHR----KKIEQETGARVS 703

Query: 182  ISEDGRVCVIAKDQSSYDQAKDMVDSVIGKEIEIGNIYSGCVTQIRDFGAFVEIEGGHQG 361
            +S DG V ++AK Q   D+A + V+ ++G+EIE+G  Y G V+ I+++GAFVE  GG QG
Sbjct: 704  VS-DGTVTIVAKTQPIMDKAIEKVEFLVGREIEVGKTYKGVVSSIKEYGAFVEFNGGQQG 762

Query: 362  LLHISELSHQRVAQVTDAVMLGQKLSVMCIGRDTKGNIKLSLKATMP 502
            LLHISELSH +V++V+D V +GQ LS+ CIG+D +GNIKLSLKAT+P
Sbjct: 763  LLHISELSHDKVSKVSDVVSVGQVLSLTCIGQDLRGNIKLSLKATLP 809


>tr|A3A938|A3A938_ORYSJ Putative uncharacterized protein OS=Oryza
            sativa subsp. japonica GN=OsJ_007310 PE=4 SV=1
          Length = 1448

 Score =  156 bits (394), Expect = 8e-37
 Identities = 81/167 (48%), Positives = 114/167 (68%)
 Frame = +2

Query: 2    AREQILDVMEQEIREPKTEQKANAPRKGNFSVQREMVGRLIGPHGSTVKNIERTTGVRLS 181
            AR QILD M+QEI   +     ++PR    S   + + +L+       K IE+ TG R+S
Sbjct: 559  ARNQILDRMDQEISSARAFNDGSSPRLATLSFSSDSLRKLLFHR----KKIEQETGARVS 614

Query: 182  ISEDGRVCVIAKDQSSYDQAKDMVDSVIGKEIEIGNIYSGCVTQIRDFGAFVEIEGGHQG 361
            +S DG V ++AK Q   D+A + V+ ++G+EIE+G  Y G V+ I+++GAFVE  GG QG
Sbjct: 615  VS-DGTVTIVAKTQPIMDKAIEKVEFLVGREIEVGRTYKGVVSSIKEYGAFVEFNGGQQG 673

Query: 362  LLHISELSHQRVAQVTDAVMLGQKLSVMCIGRDTKGNIKLSLKATMP 502
            LLHISELSH +V++V+D V +GQ LS+ CIG+D +GNIKLSLKAT+P
Sbjct: 674  LLHISELSHDKVSKVSDVVSVGQVLSLTCIGQDLRGNIKLSLKATLP 720


>tr|Q9S7G6|Q9S7G6_ARATH Polynucleotide phosphorylase (Polynucleotide
            phosphorylase) OS=Arabidopsis thaliana GN=Pnp PE=2 SV=1
          Length = 991

 Score =  153 bits (386), Expect = 7e-36
 Identities = 76/167 (45%), Positives = 113/167 (67%)
 Frame = +2

Query: 2    AREQILDVMEQEIREPKTEQKANAPRKGNFSVQREMVGRLIGPHGSTVKNIERTTGVRLS 181
            AR QILD ME+ I  P+ +  A +PR        + +  LIGP G   + IE  TG RLS
Sbjct: 585  ARLQILDHMERNINSPRGQDGAYSPRLATLKYSNDSLRTLIGPMGVLKRKIEVETGARLS 644

Query: 182  ISEDGRVCVIAKDQSSYDQAKDMVDSVIGKEIEIGNIYSGCVTQIRDFGAFVEIEGGHQG 361
            I ++G + ++AK+Q   ++A++ VD +IG+E+ +G +Y G V+ I+++GAFVE  GG QG
Sbjct: 645  I-DNGTLTIVAKNQDVMEKAQEQVDFIIGRELVVGGVYKGTVSSIKEYGAFVEFPGGQQG 703

Query: 362  LLHISELSHQRVAQVTDAVMLGQKLSVMCIGRDTKGNIKLSLKATMP 502
            LLH+SELSH+ V++V+D + +GQ ++ MCI  D +GNIKLS KA +P
Sbjct: 704  LLHMSELSHEPVSKVSDVLDIGQCITTMCIETDVRGNIKLSRKALLP 750


>tr|A4RT74|A4RT74_OSTLU Predicted protein OS=Ostreococcus
           lucimarinus (strain CCE9901) GN=OSTLU_12216 PE=4 SV=1
          Length = 679

 Score =  134 bits (338), Expect = 2e-30
 Identities = 60/168 (35%), Positives = 109/168 (64%), Gaps = 1/168 (0%)
 Frame = +2

Query: 2   AREQILDVMEQEIREPKTEQKANAPRKGNFSVQREMVGRLIGPHGSTVKNIERTTGVRLS 181
           AR++++DVME+ + EPK+  K +APR G  ++   ++G+LIGP GS +K +E+ TG ++S
Sbjct: 487 ARQKVIDVMERAVSEPKSVMKDSAPRYGRATLPPALIGKLIGPQGSNIKALEKETGAKVS 546

Query: 182 I-SEDGRVCVIAKDQSSYDQAKDMVDSVIGKEIEIGNIYSGCVTQIRDFGAFVEIEGGHQ 358
           + ++DG + V  ++++SYD A   ++++    +E+G  Y+  V ++  FG  +    G  
Sbjct: 547 VVNDDGDLAVFGQNKASYDAAIAHIENLKNSIVEVGKTYATTVKEVLPFGCVLTTASGDD 606

Query: 359 GLLHISELSHQRVAQVTDAVMLGQKLSVMCIGRDTKGNIKLSLKATMP 502
           GLLH+SE++H+    V+D   +G ++ V C+ +D +G+IK S KA +P
Sbjct: 607 GLLHVSEIAHEHTENVSDVYSVGDQVEVKCVKKDARGSIKWSRKALLP 654


>tr|B4D3R8|B4D3R8_9BACT Polyribonucleotide nucleotidyltransferase
            OS=Chthoniobacter flavus Ellin428 GN=CfE428DRAFT_3556
            PE=4 SV=1
          Length = 716

 Score =  133 bits (334), Expect = 7e-30
 Identities = 68/166 (40%), Positives = 102/166 (61%)
 Frame = +2

Query: 2    AREQILDVMEQEIREPKTEQKANAPRKGNFSVQREMVGRLIGPHGSTVKNIERTTGVRLS 181
            AR ++LDVM+  + +P+TE    APR     +  + +G +IGP G T+K I   TG  ++
Sbjct: 535  ARMRVLDVMDSALSQPRTELSKYAPRIETIRINPDKIGLIIGPGGKTIKGIVAETGAEIN 594

Query: 182  ISEDGRVCVIAKDQSSYDQAKDMVDSVIGKEIEIGNIYSGCVTQIRDFGAFVEIEGGHQG 361
            I +DG V + + +  S  +AK +++ +  KEI +G +Y G V  I++FG FVE+  G  G
Sbjct: 595  IEDDGSVHIYSNNGDSLLRAKQIIEGMT-KEISVGEMYQGRVVTIKEFGCFVEVLPGKDG 653

Query: 362  LLHISELSHQRVAQVTDAVMLGQKLSVMCIGRDTKGNIKLSLKATM 499
            ++HISEL+  RV +V D V +G  + V CIG D KG +KLS KA M
Sbjct: 654  MVHISELADFRVNRVEDVVKMGDVIWVKCIGVDEKGRVKLSRKAAM 699


>tr|B3DZ86|B3DZ86_METI4 Polyribonucleotide nucleotidyltransferase
           (Polynucleotide phosphorylase) OS=Methylacidiphilum
           infernorum (isolate V4) GN=pnp PE=4 SV=1
          Length = 669

 Score =  132 bits (333), Expect = 9e-30
 Identities = 66/166 (39%), Positives = 100/166 (60%)
 Frame = +2

Query: 2   AREQILDVMEQEIREPKTEQKANAPRKGNFSVQREMVGRLIGPHGSTVKNIERTTGVRLS 181
           AR  ILD M++ I  P+ E   +APR     +  + +G LIGP G T+K I   +G  ++
Sbjct: 496 ARMVILDCMDKVINAPRAEISKHAPRIEKIKIHPDKIGLLIGPGGKTIKKISAESGAEIT 555

Query: 182 ISEDGRVCVIAKDQSSYDQAKDMVDSVIGKEIEIGNIYSGCVTQIRDFGAFVEIEGGHQG 361
           I +DG V + +    S + A++M++ ++G E+ +G IY   V  ++DFG F+EI+G  +G
Sbjct: 556 IEDDGTVMIYSSSADSLEAAREMIEDMVG-EVTVGGIYRSKVVSVKDFGCFIEIKGKGEG 614

Query: 362 LLHISELSHQRVAQVTDAVMLGQKLSVMCIGRDTKGNIKLSLKATM 499
           L+HISELS   V +V   V +G+++ V CIG D KG  K S KA M
Sbjct: 615 LVHISELSDTPVRRVDQVVRVGEEIWVKCIGVDEKGRYKFSRKAAM 660