BP917392
Clone id YMU001_000100_C05
Library
Length 531
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000100_C05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CTATCGCGCAAGACCGGCCCTTCGGCCTCCAAATGCTCATCCTCGCATTCATCTTCTTCT
CCCACAGATCCATGCTCATCACAAGAATCACCTTCTTCATGCACACTTGATTTGCGACCT
TTCTTGACATGCGTCTTTTGCACTTTTCCACGCTTTTTGAGAATCTTGTAGCCCCTGCCA
CGAGCATGACTACTCTCTACATCTCCATTAGCATCATGAATTCTTCTTGCATGATTCCTC
TTAGCCTTTCTAAATGCATCACGAGTGTCCACATTCACATTATTAGCACTGCCATCACAA
ATCAAATCAACATCTTGGGCCTTTGGCCGTCCTCTACCCACGATGACACGCTTTGGAGGT
CGACCTCTCTTACATGTTGTAGGGGGTGCACCAGACACTCCTACAAGAGGCATAGTTGCA
ATAGAAGCAAATGTAGACAAGAAAGGGGCTTCCTCATTCGTTTCTTCCACTTGTGTAGAC
AATGCATTCATAGTAAGCGCATCATCCGTAGTGTCCATAACCTGCATCAAA
■■Homology search results ■■ -
sp_hit_id Q8J257
Definition sp|Q8J257|PACC_PARBR pH-response transcription factor pacC/RIM101 OS=Paracoccidioides brasiliensis
Align length 28
Score (bit) 28.5
E-value 0.44
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917392|Adiantum capillus-veneris mRNA, clone:
YMU001_000100_C05.
(531 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8J257|PACC_PARBR pH-response transcription factor pacC/RIM10... 28 0.44
sp|Q9M667|RPP13_ARATH Disease resistance protein RPP13 OS=Arabid... 32 1.9
sp|Q6IYF8|OXGR1_MOUSE 2-oxoglutarate receptor 1 OS=Mus musculus ... 32 2.5
sp|Q6PAL7|AHDC1_MOUSE A.T hook DNA-binding motif-containing prot... 32 2.5
sp|Q6Y1R5|OXGR1_RAT 2-oxoglutarate receptor 1 OS=Rattus norvegic... 31 3.2
sp|P42975|BIRA_BACSU Bifunctional protein birA OS=Bacillus subti... 31 3.2
sp|Q5TGY3|AHDC1_HUMAN A.T hook DNA-binding motif-containing prot... 31 4.2
sp|P49144|5HT1B_RABIT 5-hydroxytryptamine receptor 1B OS=Oryctol... 30 5.5
sp|P79250|5HT1B_CANFA 5-hydroxytryptamine receptor 1B OS=Canis f... 30 7.2
sp|Q23924|COPB_DICDI Coatomer subunit beta OS=Dictyostelium disc... 30 9.4

>sp|Q8J257|PACC_PARBR pH-response transcription factor pacC/RIM101
OS=Paracoccidioides brasiliensis GN=pacC PE=3 SV=2
Length = 706

Score = 28.5 bits (62), Expect(2) = 0.44
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2

Query: 257 HHECPHSHY*HCHHKSNQHLGPLAVLYP 340
HH P HY H H+ ++ H A +YP
Sbjct: 490 HHIPPSHHYTHTHNHNHNHPNSSAGMYP 517



Score = 23.5 bits (49), Expect(2) = 0.44
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +3

Query: 330 SSTHDDTLWRSTSLTCCRGCTRHSYKRHSCNR 425
SS D R + CCRG R ++RH R
Sbjct: 546 SSVFDSEGGRRYAGGCCRGLDRGLWRRHHRRR 577


>sp|Q9M667|RPP13_ARATH Disease resistance protein RPP13
OS=Arabidopsis thaliana GN=RPP13 PE=2 SV=2
Length = 835

Score = 32.0 bits (71), Expect = 1.9
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +3

Query: 333 STHDDTLWRSTSLTCCRGCTRHSYKRHSCNRSKCRQERGFLI--RFFHLCRQCIHSKRII 506
+ ++D + + +S TC R H +KR+S + K ++ R FL F HL + +++
Sbjct: 507 NVYNDHVAQHSSTTCRREVVHHQFKRYSSEKRKNKRMRSFLYFGEFDHLVGLDFETLKLL 566

Query: 507 R 509
R
Sbjct: 567 R 567


>sp|Q6IYF8|OXGR1_MOUSE 2-oxoglutarate receptor 1 OS=Mus musculus
GN=Oxgr1 PE=2 SV=1
Length = 337

Score = 31.6 bits (70), Expect = 2.5
Identities = 25/93 (26%), Positives = 34/93 (36%), Gaps = 16/93 (17%)
Frame = +3

Query: 279 IISTAITNQINILGLWPSSTHDDTLWRSTSLTCCRGCT----------------RHSYKR 410
I ST TN+ L L S W + LT C H +
Sbjct: 172 ITSTTRTNRSACLDLTSSDDLTTIKWYNLILTATTFCLPLVIVTLCYTTIISTLTHGPRT 231

Query: 411 HSCNRSKCRQERGFLIRFFHLCRQCIHSKRIIR 509
HSC + K R+ L+ F++C H R+IR
Sbjct: 232 HSCFKQKARRLTILLLLVFYICFLPFHILRVIR 264


>sp|Q6PAL7|AHDC1_MOUSE A.T hook DNA-binding motif-containing protein
1 OS=Mus musculus GN=Ahdc1 PE=1 SV=1
Length = 1594

Score = 31.6 bits (70), Expect = 2.5
Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = -2

Query: 518 MDTTDDALTMNALSTQVEETNEEAPFLSTFASIATMPLVGVSGAPPTTCKR--GRPPKRV 345
+ + +L++ + ++E P L + + +V G P KR GRPPK +
Sbjct: 492 VSSLSSSLSVEGKELGLRVSSEPTPLLKMKNNGRNVVVVFPPGEMPIILKRKRGRPPKNL 551

Query: 344 IVGRGRPKAQDV 309
++G G+PK V
Sbjct: 552 LLGPGKPKEPTV 563


>sp|Q6Y1R5|OXGR1_RAT 2-oxoglutarate receptor 1 OS=Rattus norvegicus
GN=Oxgr1 PE=2 SV=1
Length = 337

Score = 31.2 bits (69), Expect = 3.2
Identities = 25/93 (26%), Positives = 34/93 (36%), Gaps = 16/93 (17%)
Frame = +3

Query: 279 IISTAITNQINILGLWPSSTHDDTLWRSTSLTCCRGCT----------------RHSYKR 410
I ST TN+ L L S W + LT C H +
Sbjct: 172 ITSTTRTNRSACLDLTSSDDLTTIKWYNLILTATTFCLPLLIVTLCYTTIISTLTHGPRT 231

Query: 411 HSCNRSKCRQERGFLIRFFHLCRQCIHSKRIIR 509
HSC + K R+ L+ F++C H R+IR
Sbjct: 232 HSCFKQKARRLTILLLLVFYVCFLPFHILRVIR 264


>sp|P42975|BIRA_BACSU Bifunctional protein birA OS=Bacillus subtilis
GN=birA PE=1 SV=1
Length = 325

Score = 31.2 bits (69), Expect = 3.2
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = -2

Query: 269 DTRDAFRKAKRNHARRIHDANGDVESSHARGRGYKILKKRGKVQKTHVKKGRKSSV 102
D R A H + +VE+ R +GY+++KK GK+ ++ ++ G K+ V
Sbjct: 28 DALGCSRTAVWKHIEELRKEGYEVEA--VRRKGYRLIKKPGKLSESEIRFGLKTEV 81


>sp|Q5TGY3|AHDC1_HUMAN A.T hook DNA-binding motif-containing protein
1 OS=Homo sapiens GN=AHDC1 PE=1 SV=1
Length = 1603

Score = 30.8 bits (68), Expect = 4.2
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = -2

Query: 371 KRGRPPKRVIVGRGRPK 321
KRGRPPK +++G G+PK
Sbjct: 546 KRGRPPKNLLLGPGKPK 562


>sp|P49144|5HT1B_RABIT 5-hydroxytryptamine receptor 1B
OS=Oryctolagus cuniculus GN=HTR1B PE=2 SV=1
Length = 390

Score = 30.4 bits (67), Expect = 5.5
Identities = 14/53 (26%), Positives = 22/53 (41%)
Frame = +3

Query: 240 LSLSKCITSVHIHIISTAITNQINILGLWPSSTHDDTLWRSTSLTCCRGCTRH 398
L S +T + + I+ I+ + G W LW S+ +TCC H
Sbjct: 87 LIASLAVTDLLVSILVMPISTMYTVTGRWTLGQVVCDLWLSSDITCCTASIMH 139


>sp|P79250|5HT1B_CANFA 5-hydroxytryptamine receptor 1B OS=Canis
familiaris GN=HTR1B PE=2 SV=2
Length = 389

Score = 30.0 bits (66), Expect = 7.2
Identities = 14/53 (26%), Positives = 22/53 (41%)
Frame = +3

Query: 240 LSLSKCITSVHIHIISTAITNQINILGLWPSSTHDDTLWRSTSLTCCRGCTRH 398
L S +T + + I+ I+ + G W LW S+ +TCC H
Sbjct: 86 LIASLAVTDLLVSILVMPISTMYTVTGRWTLGQVVCDLWLSSDITCCTASILH 138


>sp|Q23924|COPB_DICDI Coatomer subunit beta OS=Dictyostelium
discoideum GN=copb PE=2 SV=2
Length = 912

Score = 29.6 bits (65), Expect = 9.4
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = -2

Query: 311 VDLICDGSANNVNVDTRDAFRKAKRNHARRIHDANGDV 198
+DL+C+ S NNV + D + K+NH++ + + D+
Sbjct: 290 IDLLCNESDNNVKMIVLDKLIEIKKNHSKIMEELVMDI 327


tr_hit_id B4L6C6
Definition tr|B4L6C6|B4L6C6_DROMO GI16343 OS=Drosophila mojavensis
Align length 155
Score (bit) 37.7
E-value 0.37
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917392|Adiantum capillus-veneris mRNA, clone:
YMU001_000100_C05.
(531 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B4L6C6|B4L6C6_DROMO GI16343 OS=Drosophila mojavensis GN=GI163... 38 0.37
tr|Q8B103|Q8B103_9VIRU Glycoprotein OS=Dobrava-Belgrade virus PE... 37 0.48
tr|Q82466|Q82466_9VIRU Polyprotein (Fragment) OS=Hantavirus PE=4... 37 0.48
tr|Q82463|Q82463_9VIRU Polyprotein (Fragment) OS=Hantavirus PE=4... 37 0.48
tr|Q806Y7|Q806Y7_9VIRU Glycoprotein (G1-G2) OS=Dobrava-Belgrade ... 37 0.48
tr|Q9YQ47|Q9YQ47_9VIRU Polyprotein (Fragment) OS=Dobrava-Belgrad... 37 0.62
tr|Q9YKK4|Q9YKK4_9VIRU Polyprotein OS=Dobrava-Belgrade virus PE=... 37 0.62
tr|Q1GVV7|Q1GVV7_SPHAL Putative uncharacterized protein OS=Sphin... 37 0.83
tr|B4XWQ0|B4XWQ0_9VIRU Glycoprotein OS=Dobrava-Belgrade virus GN... 36 1.4
tr|Q8MMQ2|Q8MMQ2_DICDI Putative uncharacterized protein OS=Dicty... 36 1.4
tr|B4N1L6|B4N1L6_DROWI GK16330 OS=Drosophila willistoni GN=GK163... 36 1.4
tr|Q9I5N6|Q9I5N6_PSEAE Putative uncharacterized protein OS=Pseud... 36 1.4
tr|Q8B102|Q8B102_9VIRU Glycoprotein OS=Dobrava-Belgrade virus PE... 35 1.8
tr|Q4JCQ6|Q4JCQ6_9VIRU Glycoprotein OS=Dobrava-Belgrade virus PE... 35 1.8
tr|B4XWQ3|B4XWQ3_9VIRU Glycoprotein OS=Dobrava-Belgrade virus GN... 35 1.8
tr|A4X7X6|A4X7X6_SALTO Fumarate reductase/succinate dehydrogenas... 35 1.8
tr|B8BXX7|B8BXX7_THAPS Predicted protein OS=Thalassiosira pseudo... 35 1.8
tr|A4H4N6|A4H4N6_LEIBR Putative uncharacterized protein OS=Leish... 35 1.8
tr|Q5W771|Q5W771_ORYSJ Putative polyprotein OS=Oryza sativa subs... 35 2.4
tr|Q60EC3|Q60EC3_ORYSJ Unknow protein OS=Oryza sativa subsp. jap... 35 3.1
tr|B4JUR0|B4JUR0_DROGR GH15235 OS=Drosophila grimshawi GN=GH1523... 35 3.1
tr|B3NCY9|B3NCY9_DROER GG15622 OS=Drosophila erecta GN=GG15622 P... 35 3.1
tr|B7UZ39|B7UZ39_PSEAE Putative uncharacterized protein OS=Pseud... 35 3.2
tr|A3LLN7|A3LLN7_PSEAE Putative uncharacterized protein OS=Pseud... 35 3.2
tr|Q8LM64|Q8LM64_ORYSJ Putative retrotransposable elements TNP2 ... 34 4.0
tr|Q2R361|Q2R361_ORYSJ Transposon protein, putative, CACTA, En/S... 34 4.0
tr|Q9VVT4|Q9VVT4_DROME CG14074 OS=Drosophila melanogaster GN=CG1... 34 4.0
tr|Q53MQ2|Q53MQ2_ORYSJ Transposon protein, putative, CACTA, En/S... 34 5.3
tr|Q2QMN1|Q2QMN1_ORYSJ Transposon protein, putative, CACTA, En/S... 34 5.3
tr|A5E480|A5E480_LODEL Putative uncharacterized protein OS=Lodde... 34 5.3

>tr|B4L6C6|B4L6C6_DROMO GI16343 OS=Drosophila mojavensis GN=GI16343
PE=4 SV=1
Length = 3323

Score = 37.7 bits (86), Expect = 0.37
Identities = 36/155 (23%), Positives = 64/155 (41%), Gaps = 8/155 (5%)
Frame = -2

Query: 506 DDALTMNALSTQVEETNEEAPFLSTFASIATMPLVGVSGAPPTTCKRGRPPKRVIVGRGR 327
+ A+ ++ T +A ST ++ +T + +G KRGRPPK+
Sbjct: 1172 EQAVAVSNKDTSNTTATSDASNTSTTSNTSTTSTINSTGKR----KRGRPPKKATEEHSE 1227

Query: 326 PKAQDVDLICDGSANNVNVDT----RDAFRKAKRNHARRIHDANGDV----ESSHARGRG 171
PK++ + +A + DT RKAKR+ +++D + + HA GR
Sbjct: 1228 PKSRQEEEQEMPAAKRICTDTLPPPARTRRKAKRSELEKLNDDIAHMYYADDVIHATGR- 1286

Query: 170 YKILKKRGKVQKTHVKKGRKSSVHEEGDSCDEHGS 66
+ QK + + S+V SC ++ S
Sbjct: 1287 ----RTCTTQQKQSIAESSSSNVSSRRSSCSQNSS 1317


>tr|Q8B103|Q8B103_9VIRU Glycoprotein OS=Dobrava-Belgrade virus PE=4
SV=1
Length = 1135

Score = 37.4 bits (85), Expect = 0.48
Identities = 24/72 (33%), Positives = 35/72 (48%)
Frame = +3

Query: 237 PLSLSKCITSVHIHIISTAITNQINILGLWPSSTHDDTLWRSTSLTCCRGCTRHSYKRHS 416
PL+ + + +HI I S I+ ++ LG W D L TS C CT++ Y H+
Sbjct: 694 PLNQEQSV-DLHIEIESQGISTSVHALGHW----FDGRLNLKTSFHCYGACTKYEYPWHT 748

Query: 417 CNRSKCRQERGF 452
+KC ER F
Sbjct: 749 ---AKCHFERDF 757


>tr|Q82466|Q82466_9VIRU Polyprotein (Fragment) OS=Hantavirus PE=4
SV=1
Length = 137

Score = 37.4 bits (85), Expect = 0.48
Identities = 24/72 (33%), Positives = 35/72 (48%)
Frame = +3

Query: 237 PLSLSKCITSVHIHIISTAITNQINILGLWPSSTHDDTLWRSTSLTCCRGCTRHSYKRHS 416
PL+ + + +HI I S I+ ++ LG W D L TS C CT++ Y H+
Sbjct: 51 PLNQEQSV-DLHIEIESQGISTSVHALGHW----FDGRLNLKTSFHCYGACTKYEYPWHT 105

Query: 417 CNRSKCRQERGF 452
+KC ER F
Sbjct: 106 ---AKCHFERDF 114


>tr|Q82463|Q82463_9VIRU Polyprotein (Fragment) OS=Hantavirus PE=4
SV=1
Length = 110

Score = 37.4 bits (85), Expect = 0.48
Identities = 24/72 (33%), Positives = 35/72 (48%)
Frame = +3

Query: 237 PLSLSKCITSVHIHIISTAITNQINILGLWPSSTHDDTLWRSTSLTCCRGCTRHSYKRHS 416
PL+ + + +HI I S I+ ++ LG W D L TS C CT++ Y H+
Sbjct: 46 PLNQEQSV-DLHIEIESQGISTSVHALGHW----FDGRLNLKTSFHCYGACTKYEYPWHT 100

Query: 417 CNRSKCRQERGF 452
+KC ER F
Sbjct: 101 ---AKCHFERDF 109


>tr|Q806Y7|Q806Y7_9VIRU Glycoprotein (G1-G2) OS=Dobrava-Belgrade
virus GN=M segment PE=4 SV=1
Length = 1135

Score = 37.4 bits (85), Expect = 0.48
Identities = 24/72 (33%), Positives = 35/72 (48%)
Frame = +3

Query: 237 PLSLSKCITSVHIHIISTAITNQINILGLWPSSTHDDTLWRSTSLTCCRGCTRHSYKRHS 416
PL+ + + +HI I S I+ ++ LG W D L TS C CT++ Y H+
Sbjct: 694 PLNQEQSV-DLHIEIESQGISTSVHALGHW----FDGRLNLKTSFHCYGACTKYEYPWHT 748

Query: 417 CNRSKCRQERGF 452
+KC ER F
Sbjct: 749 ---AKCHFERDF 757


>tr|Q9YQ47|Q9YQ47_9VIRU Polyprotein (Fragment) OS=Dobrava-Belgrade
virus PE=4 SV=1
Length = 197

Score = 37.0 bits (84), Expect = 0.62
Identities = 22/62 (35%), Positives = 30/62 (48%)
Frame = +3

Query: 267 VHIHIISTAITNQINILGLWPSSTHDDTLWRSTSLTCCRGCTRHSYKRHSCNRSKCRQER 446
+HI I S I+ ++ LG W D L TS C CT++ Y H+ +KC ER
Sbjct: 47 LHIEIESQGISTSVHALGHW----FDGRLNLKTSFHCYGACTKYEYPWHT---AKCHFER 99

Query: 447 GF 452
F
Sbjct: 100 DF 101


>tr|Q9YKK4|Q9YKK4_9VIRU Polyprotein OS=Dobrava-Belgrade virus PE=4
SV=2
Length = 1135

Score = 37.0 bits (84), Expect = 0.62
Identities = 22/62 (35%), Positives = 30/62 (48%)
Frame = +3

Query: 267 VHIHIISTAITNQINILGLWPSSTHDDTLWRSTSLTCCRGCTRHSYKRHSCNRSKCRQER 446
+HI I S I+ ++ LG W D L TS C CT++ Y H+ +KC ER
Sbjct: 703 LHIEIESQGISTSVHALGHW----FDGRLNLKTSFHCYGACTKYEYPWHT---AKCHFER 755

Query: 447 GF 452
F
Sbjct: 756 DF 757


>tr|Q1GVV7|Q1GVV7_SPHAL Putative uncharacterized protein
OS=Sphingopyxis alaskensis GN=Sala_0494 PE=3 SV=1
Length = 688

Score = 36.6 bits (83), Expect = 0.83
Identities = 23/67 (34%), Positives = 32/67 (47%)
Frame = +1

Query: 268 STFTLLALPSQIKSTSWAFGRPLPTMTRFGGRPLLHVVGGAPDTPTRGIVAIEANVDKKG 447
+TFTL Q+K + G+P+P MTR GG G P V E+ +DK G
Sbjct: 549 ATFTLRLSYGQVKGWTER-GKPVPAMTRIGG-TYDRATGQLPYKLAEAFVTAESRIDKNG 606

Query: 448 ASSFVSS 468
FV++
Sbjct: 607 VYDFVTT 613


>tr|B4XWQ0|B4XWQ0_9VIRU Glycoprotein OS=Dobrava-Belgrade virus
GN=GPC PE=4 SV=1
Length = 1133

Score = 35.8 bits (81), Expect = 1.4
Identities = 21/62 (33%), Positives = 30/62 (48%)
Frame = +3

Query: 267 VHIHIISTAITNQINILGLWPSSTHDDTLWRSTSLTCCRGCTRHSYKRHSCNRSKCRQER 446
+HI I S I+ ++ LG W D L TS C CT++ Y H+ ++C ER
Sbjct: 701 LHIEIESQGISTSVHALGHW----FDGRLNLKTSFHCYGACTKYEYPWHT---ARCHFER 753

Query: 447 GF 452
F
Sbjct: 754 DF 755


>tr|Q8MMQ2|Q8MMQ2_DICDI Putative uncharacterized protein
OS=Dictyostelium discoideum GN=DDB_0167272 PE=4 SV=2
Length = 1324

Score = 35.8 bits (81), Expect = 1.4
Identities = 34/133 (25%), Positives = 54/133 (40%)
Frame = -2

Query: 482 LSTQVEETNEEAPFLSTFASIATMPLVGVSGAPPTTCKRGRPPKRVIVGRGRPKAQDVDL 303
L +++T + PF S F+S ++ G GAPPT PP I PK +
Sbjct: 652 LEINLKQTLKNKPFHSLFSSGSSNSSSGNGGAPPT--PPPPPPPPPIPSSSYPKK---SI 706

Query: 302 ICDGSANNVNVDTRDAFRKAKRNHARRIHDANGDVESSHARGRGYKILKKRGKVQKTHVK 123
+ S+ + + + K R+H +R + N ES + G+ Q HV
Sbjct: 707 LSSSSSTDYDAPIQHHIFKFHRDH-KRSYSTNTPPESENNNNNNNNNNNNNGQYQ--HVS 763

Query: 122 KGRKSSVHEEGDS 84
SV ++ DS
Sbjct: 764 SSNLESVLKDSDS 776