BP917392 |
Clone id |
YMU001_000100_C05 |
Library |
YMU01 |
Length |
531 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000100_C05. |
Accession |
BP917392 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1523Contig1 |
Sequence |
CTATCGCGCAAGACCGGCCCTTCGGCCTCCAAATGCTCATCCTCGCATTCATCTTCTTCT CCCACAGATCCATGCTCATCACAAGAATCACCTTCTTCATGCACACTTGATTTGCGACCT TTCTTGACATGCGTCTTTTGCACTTTTCCACGCTTTTTGAGAATCTTGTAGCCCCTGCCA CGAGCATGACTACTCTCTACATCTCCATTAGCATCATGAATTCTTCTTGCATGATTCCTC TTAGCCTTTCTAAATGCATCACGAGTGTCCACATTCACATTATTAGCACTGCCATCACAA ATCAAATCAACATCTTGGGCCTTTGGCCGTCCTCTACCCACGATGACACGCTTTGGAGGT CGACCTCTCTTACATGTTGTAGGGGGTGCACCAGACACTCCTACAAGAGGCATAGTTGCA ATAGAAGCAAATGTAGACAAGAAAGGGGCTTCCTCATTCGTTTCTTCCACTTGTGTAGAC AATGCATTCATAGTAAGCGCATCATCCGTAGTGTCCATAACCTGCATCAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8J257 |
Definition |
sp|Q8J257|PACC_PARBR pH-response transcription factor pacC/RIM101 OS=Paracoccidioides brasiliensis |
Align length |
28 |
Score (bit) |
28.5 |
E-value |
0.44 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B4L6C6 |
Definition |
tr|B4L6C6|B4L6C6_DROMO GI16343 OS=Drosophila mojavensis |
Align length |
155 |
Score (bit) |
37.7 |
E-value |
0.37 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917392|Adiantum capillus-veneris mRNA, clone: YMU001_000100_C05. (531 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B4L6C6|B4L6C6_DROMO GI16343 OS=Drosophila mojavensis GN=GI163... 38 0.37 tr|Q8B103|Q8B103_9VIRU Glycoprotein OS=Dobrava-Belgrade virus PE... 37 0.48 tr|Q82466|Q82466_9VIRU Polyprotein (Fragment) OS=Hantavirus PE=4... 37 0.48 tr|Q82463|Q82463_9VIRU Polyprotein (Fragment) OS=Hantavirus PE=4... 37 0.48 tr|Q806Y7|Q806Y7_9VIRU Glycoprotein (G1-G2) OS=Dobrava-Belgrade ... 37 0.48 tr|Q9YQ47|Q9YQ47_9VIRU Polyprotein (Fragment) OS=Dobrava-Belgrad... 37 0.62 tr|Q9YKK4|Q9YKK4_9VIRU Polyprotein OS=Dobrava-Belgrade virus PE=... 37 0.62 tr|Q1GVV7|Q1GVV7_SPHAL Putative uncharacterized protein OS=Sphin... 37 0.83 tr|B4XWQ0|B4XWQ0_9VIRU Glycoprotein OS=Dobrava-Belgrade virus GN... 36 1.4 tr|Q8MMQ2|Q8MMQ2_DICDI Putative uncharacterized protein OS=Dicty... 36 1.4 tr|B4N1L6|B4N1L6_DROWI GK16330 OS=Drosophila willistoni GN=GK163... 36 1.4 tr|Q9I5N6|Q9I5N6_PSEAE Putative uncharacterized protein OS=Pseud... 36 1.4 tr|Q8B102|Q8B102_9VIRU Glycoprotein OS=Dobrava-Belgrade virus PE... 35 1.8 tr|Q4JCQ6|Q4JCQ6_9VIRU Glycoprotein OS=Dobrava-Belgrade virus PE... 35 1.8 tr|B4XWQ3|B4XWQ3_9VIRU Glycoprotein OS=Dobrava-Belgrade virus GN... 35 1.8 tr|A4X7X6|A4X7X6_SALTO Fumarate reductase/succinate dehydrogenas... 35 1.8 tr|B8BXX7|B8BXX7_THAPS Predicted protein OS=Thalassiosira pseudo... 35 1.8 tr|A4H4N6|A4H4N6_LEIBR Putative uncharacterized protein OS=Leish... 35 1.8 tr|Q5W771|Q5W771_ORYSJ Putative polyprotein OS=Oryza sativa subs... 35 2.4 tr|Q60EC3|Q60EC3_ORYSJ Unknow protein OS=Oryza sativa subsp. jap... 35 3.1 tr|B4JUR0|B4JUR0_DROGR GH15235 OS=Drosophila grimshawi GN=GH1523... 35 3.1 tr|B3NCY9|B3NCY9_DROER GG15622 OS=Drosophila erecta GN=GG15622 P... 35 3.1 tr|B7UZ39|B7UZ39_PSEAE Putative uncharacterized protein OS=Pseud... 35 3.2 tr|A3LLN7|A3LLN7_PSEAE Putative uncharacterized protein OS=Pseud... 35 3.2 tr|Q8LM64|Q8LM64_ORYSJ Putative retrotransposable elements TNP2 ... 34 4.0 tr|Q2R361|Q2R361_ORYSJ Transposon protein, putative, CACTA, En/S... 34 4.0 tr|Q9VVT4|Q9VVT4_DROME CG14074 OS=Drosophila melanogaster GN=CG1... 34 4.0 tr|Q53MQ2|Q53MQ2_ORYSJ Transposon protein, putative, CACTA, En/S... 34 5.3 tr|Q2QMN1|Q2QMN1_ORYSJ Transposon protein, putative, CACTA, En/S... 34 5.3 tr|A5E480|A5E480_LODEL Putative uncharacterized protein OS=Lodde... 34 5.3
>tr|B4L6C6|B4L6C6_DROMO GI16343 OS=Drosophila mojavensis GN=GI16343 PE=4 SV=1 Length = 3323
Score = 37.7 bits (86), Expect = 0.37 Identities = 36/155 (23%), Positives = 64/155 (41%), Gaps = 8/155 (5%) Frame = -2
Query: 506 DDALTMNALSTQVEETNEEAPFLSTFASIATMPLVGVSGAPPTTCKRGRPPKRVIVGRGR 327 + A+ ++ T +A ST ++ +T + +G KRGRPPK+ Sbjct: 1172 EQAVAVSNKDTSNTTATSDASNTSTTSNTSTTSTINSTGKR----KRGRPPKKATEEHSE 1227
Query: 326 PKAQDVDLICDGSANNVNVDT----RDAFRKAKRNHARRIHDANGDV----ESSHARGRG 171 PK++ + +A + DT RKAKR+ +++D + + HA GR Sbjct: 1228 PKSRQEEEQEMPAAKRICTDTLPPPARTRRKAKRSELEKLNDDIAHMYYADDVIHATGR- 1286
Query: 170 YKILKKRGKVQKTHVKKGRKSSVHEEGDSCDEHGS 66 + QK + + S+V SC ++ S Sbjct: 1287 ----RTCTTQQKQSIAESSSSNVSSRRSSCSQNSS 1317
>tr|Q8B103|Q8B103_9VIRU Glycoprotein OS=Dobrava-Belgrade virus PE=4 SV=1 Length = 1135
Score = 37.4 bits (85), Expect = 0.48 Identities = 24/72 (33%), Positives = 35/72 (48%) Frame = +3
Query: 237 PLSLSKCITSVHIHIISTAITNQINILGLWPSSTHDDTLWRSTSLTCCRGCTRHSYKRHS 416 PL+ + + +HI I S I+ ++ LG W D L TS C CT++ Y H+ Sbjct: 694 PLNQEQSV-DLHIEIESQGISTSVHALGHW----FDGRLNLKTSFHCYGACTKYEYPWHT 748
Query: 417 CNRSKCRQERGF 452 +KC ER F Sbjct: 749 ---AKCHFERDF 757
>tr|Q82466|Q82466_9VIRU Polyprotein (Fragment) OS=Hantavirus PE=4 SV=1 Length = 137
Score = 37.4 bits (85), Expect = 0.48 Identities = 24/72 (33%), Positives = 35/72 (48%) Frame = +3
Query: 237 PLSLSKCITSVHIHIISTAITNQINILGLWPSSTHDDTLWRSTSLTCCRGCTRHSYKRHS 416 PL+ + + +HI I S I+ ++ LG W D L TS C CT++ Y H+ Sbjct: 51 PLNQEQSV-DLHIEIESQGISTSVHALGHW----FDGRLNLKTSFHCYGACTKYEYPWHT 105
Query: 417 CNRSKCRQERGF 452 +KC ER F Sbjct: 106 ---AKCHFERDF 114
>tr|Q82463|Q82463_9VIRU Polyprotein (Fragment) OS=Hantavirus PE=4 SV=1 Length = 110
Score = 37.4 bits (85), Expect = 0.48 Identities = 24/72 (33%), Positives = 35/72 (48%) Frame = +3
Query: 237 PLSLSKCITSVHIHIISTAITNQINILGLWPSSTHDDTLWRSTSLTCCRGCTRHSYKRHS 416 PL+ + + +HI I S I+ ++ LG W D L TS C CT++ Y H+ Sbjct: 46 PLNQEQSV-DLHIEIESQGISTSVHALGHW----FDGRLNLKTSFHCYGACTKYEYPWHT 100
Query: 417 CNRSKCRQERGF 452 +KC ER F Sbjct: 101 ---AKCHFERDF 109
>tr|Q806Y7|Q806Y7_9VIRU Glycoprotein (G1-G2) OS=Dobrava-Belgrade virus GN=M segment PE=4 SV=1 Length = 1135
Score = 37.4 bits (85), Expect = 0.48 Identities = 24/72 (33%), Positives = 35/72 (48%) Frame = +3
Query: 237 PLSLSKCITSVHIHIISTAITNQINILGLWPSSTHDDTLWRSTSLTCCRGCTRHSYKRHS 416 PL+ + + +HI I S I+ ++ LG W D L TS C CT++ Y H+ Sbjct: 694 PLNQEQSV-DLHIEIESQGISTSVHALGHW----FDGRLNLKTSFHCYGACTKYEYPWHT 748
Query: 417 CNRSKCRQERGF 452 +KC ER F Sbjct: 749 ---AKCHFERDF 757
>tr|Q9YQ47|Q9YQ47_9VIRU Polyprotein (Fragment) OS=Dobrava-Belgrade virus PE=4 SV=1 Length = 197
Score = 37.0 bits (84), Expect = 0.62 Identities = 22/62 (35%), Positives = 30/62 (48%) Frame = +3
Query: 267 VHIHIISTAITNQINILGLWPSSTHDDTLWRSTSLTCCRGCTRHSYKRHSCNRSKCRQER 446 +HI I S I+ ++ LG W D L TS C CT++ Y H+ +KC ER Sbjct: 47 LHIEIESQGISTSVHALGHW----FDGRLNLKTSFHCYGACTKYEYPWHT---AKCHFER 99
Query: 447 GF 452 F Sbjct: 100 DF 101
>tr|Q9YKK4|Q9YKK4_9VIRU Polyprotein OS=Dobrava-Belgrade virus PE=4 SV=2 Length = 1135
Score = 37.0 bits (84), Expect = 0.62 Identities = 22/62 (35%), Positives = 30/62 (48%) Frame = +3
Query: 267 VHIHIISTAITNQINILGLWPSSTHDDTLWRSTSLTCCRGCTRHSYKRHSCNRSKCRQER 446 +HI I S I+ ++ LG W D L TS C CT++ Y H+ +KC ER Sbjct: 703 LHIEIESQGISTSVHALGHW----FDGRLNLKTSFHCYGACTKYEYPWHT---AKCHFER 755
Query: 447 GF 452 F Sbjct: 756 DF 757
>tr|Q1GVV7|Q1GVV7_SPHAL Putative uncharacterized protein OS=Sphingopyxis alaskensis GN=Sala_0494 PE=3 SV=1 Length = 688
Score = 36.6 bits (83), Expect = 0.83 Identities = 23/67 (34%), Positives = 32/67 (47%) Frame = +1
Query: 268 STFTLLALPSQIKSTSWAFGRPLPTMTRFGGRPLLHVVGGAPDTPTRGIVAIEANVDKKG 447 +TFTL Q+K + G+P+P MTR GG G P V E+ +DK G Sbjct: 549 ATFTLRLSYGQVKGWTER-GKPVPAMTRIGG-TYDRATGQLPYKLAEAFVTAESRIDKNG 606
Query: 448 ASSFVSS 468 FV++ Sbjct: 607 VYDFVTT 613
>tr|B4XWQ0|B4XWQ0_9VIRU Glycoprotein OS=Dobrava-Belgrade virus GN=GPC PE=4 SV=1 Length = 1133
Score = 35.8 bits (81), Expect = 1.4 Identities = 21/62 (33%), Positives = 30/62 (48%) Frame = +3
Query: 267 VHIHIISTAITNQINILGLWPSSTHDDTLWRSTSLTCCRGCTRHSYKRHSCNRSKCRQER 446 +HI I S I+ ++ LG W D L TS C CT++ Y H+ ++C ER Sbjct: 701 LHIEIESQGISTSVHALGHW----FDGRLNLKTSFHCYGACTKYEYPWHT---ARCHFER 753
Query: 447 GF 452 F Sbjct: 754 DF 755
>tr|Q8MMQ2|Q8MMQ2_DICDI Putative uncharacterized protein OS=Dictyostelium discoideum GN=DDB_0167272 PE=4 SV=2 Length = 1324
Score = 35.8 bits (81), Expect = 1.4 Identities = 34/133 (25%), Positives = 54/133 (40%) Frame = -2
Query: 482 LSTQVEETNEEAPFLSTFASIATMPLVGVSGAPPTTCKRGRPPKRVIVGRGRPKAQDVDL 303 L +++T + PF S F+S ++ G GAPPT PP I PK + Sbjct: 652 LEINLKQTLKNKPFHSLFSSGSSNSSSGNGGAPPT--PPPPPPPPPIPSSSYPKK---SI 706
Query: 302 ICDGSANNVNVDTRDAFRKAKRNHARRIHDANGDVESSHARGRGYKILKKRGKVQKTHVK 123 + S+ + + + K R+H +R + N ES + G+ Q HV Sbjct: 707 LSSSSSTDYDAPIQHHIFKFHRDH-KRSYSTNTPPESENNNNNNNNNNNNNGQYQ--HVS 763
Query: 122 KGRKSSVHEEGDS 84 SV ++ DS Sbjct: 764 SSNLESVLKDSDS 776
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