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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP917396
Clone id YMU001_000100_C09
Library
Length 459
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000100_C09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
GGAAATGTCCGTGGTGTTCTTCCTTATGATACATATGTACTGGTAATAAATCACTCTCCT
TTGGGTACTGATCTAAATAAATATACCTCACTAGTGCATGATATCATCCCGATAGTGGCG
GTTGATGACCTAACATAGGTCTTGGTCTCTCTACTCCTTGTGGTGTGTTTATTGGTCTTG
AGACGTATCTCAATGGTGACAATGCTAGTCTATTTGGTTGATACCAAGGGTTTGCTGGCA
TGTTTTGTTGGTATTGAGGGTTAGGGTGATAAGGCCTATCCCTAACTTGTCTTAGATTAT
AGTATCATTCCTCGATGGCATGGTCGGTCCACTTATTCTCAATGGCACACCACTTCTGTT
TAGGATATGGCTACGGCAGCATAGTGCACTATGGTGTCAGATGATCTCCCCCATAGGTTA
AGCATCACCTCAATGGTGGTACTCTCTGATTTTGAATCC
■■Homology search results ■■ -
sp_hit_id P10163
Definition sp|P10163|PRB4_HUMAN Basic salivary proline-rich protein 4 OS=Homo sapiens
Align length 59
Score (bit) 33.5
E-value 0.45
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917396|Adiantum capillus-veneris mRNA, clone:
YMU001_000100_C09.
         (459 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P10163|PRB4_HUMAN Basic salivary proline-rich protein 4 OS=Ho...    33   0.45 
sp|A3MA94|CAPP_ACIBT Phosphoenolpyruvate carboxylase OS=Acinetob...    32   1.7  
sp|A1C9W6|INO80_ASPCL Putative DNA helicase ino80 OS=Aspergillus...    31   2.3  
sp|Q09472|EP300_HUMAN Histone acetyltransferase p300 OS=Homo sap...    31   2.3  
sp|A9N361|ZIPA_SALPB Cell division protein zipA homolog OS=Salmo...    31   2.9  
sp|A6PVC2|TTLL8_HUMAN Tubulin--tyrosine ligase-like protein 8 OS...    31   2.9  
sp|P80198|HOG3_HORVU Gamma-hordein-3 OS=Hordeum vulgare PE=1 SV=1      31   2.9  
sp|O60885|BRD4_HUMAN Bromodomain-containing protein 4 OS=Homo sa...    31   2.9  
sp|P06600|PRP33_DAUCA Proline-rich 33 kDa extensin-related prote...    30   5.0  
sp|Q7MQ86|PLSB_VIBVY Glycerol-3-phosphate acyltransferase OS=Vib...    30   5.0  
sp|Q8DD48|PLSB_VIBVU Glycerol-3-phosphate acyltransferase OS=Vib...    30   5.0  
sp|Q4P8R9|PABP_USTMA Polyadenylate-binding protein, cytoplasmic ...    30   5.0  
sp|A4XRN4|MINC_PSEMY Probable septum site-determining protein mi...    30   5.0  
sp|P86148|RBP1_PLAF7 Reticulocyte-binding protein PFD0110w OS=Pl...    30   6.5  
sp|P51774|EGR2_RAT Early growth response protein 2 OS=Rattus nor...    30   6.6  
sp|P08152|EGR2_MOUSE Early growth response protein 2 OS=Mus musc...    30   6.6  
sp|Q8ZQD5|FTSK_SALTY DNA translocase ftsK OS=Salmonella typhimur...    29   8.6  
sp|Q8Z814|FTSK_SALTI DNA translocase ftsK OS=Salmonella typhi GN...    29   8.6  

>sp|P10163|PRB4_HUMAN Basic salivary proline-rich protein 4 OS=Homo
           sapiens GN=PRB4 PE=1 SV=3
          Length = 310

 Score = 33.5 bits (75), Expect = 0.45
 Identities = 19/59 (32%), Positives = 24/59 (40%)
 Frame = -3

Query: 292 RQVRDRPYHPNPQYQQNMPANPWYQPNRLALSPLRYVSRPINTPQGVERPRPMLGHQPP 116
           +Q  ++P  P P  +   P  P   P +    P      P   PQG   PRP  G QPP
Sbjct: 251 QQEGNKPQGPPPPGKPQGPPPPGGNPQQPQAPPAGKPQGPPPPPQGGRPPRPAQGQQPP 309


>sp|A3MA94|CAPP_ACIBT Phosphoenolpyruvate carboxylase
           OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC
           755) GN=ppc PE=3 SV=1
          Length = 894

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 14/39 (35%), Positives = 24/39 (61%)
 Frame = -3

Query: 385 TMLP*PYPKQKWCAIENKWTDHAIEE*YYNLRQVRDRPY 269
           T+LP P PK +W  + N+ TDH+++      + VR+ P+
Sbjct: 652 TLLPPPEPKAEWRELMNRMTDHSVK---VYRQTVRENPH 687


>sp|A1C9W6|INO80_ASPCL Putative DNA helicase ino80 OS=Aspergillus
           clavatus GN=ino80 PE=3 SV=1
          Length = 1707

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
 Frame = -3

Query: 283 RDRPYHPN-PQYQQNMPANPWYQPNRLALSPLRYVSRPINTPQGVERPRPMLGHQPPLSG 107
           + RPY+PN  QYQQ+ P  P   P +  L+          +P     P P+    PPL+G
Sbjct: 26  KTRPYYPNNDQYQQHPPQTPPAFPPQPPLA---------RSPHYSHAPSPLPATLPPLNG 76


>sp|Q09472|EP300_HUMAN Histone acetyltransferase p300 OS=Homo sapiens
            GN=EP300 PE=1 SV=2
          Length = 2414

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
 Frame = -3

Query: 295  LRQVRDRPYHPNPQY-QQNMPANPWYQPNRLALSPLRYVSRPINTPQGVERPRPMLGHQP 119
            L+Q    P  PNP   QQ+M  N    P+         +S  + +PQ V  PRP    QP
Sbjct: 2265 LQQQMGSPVQPNPMSPQQHMLPNQAQSPHLQGQQIPNSLSNQVRSPQPVPSPRPQ--SQP 2322

Query: 118  PLS 110
            P S
Sbjct: 2323 PHS 2325


>sp|A9N361|ZIPA_SALPB Cell division protein zipA homolog
           OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
           GN=zipA PE=3 SV=1
          Length = 328

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = -3

Query: 295 LRQVRDRPYHPNPQYQQNMPANPWYQPNRLALSPLRYVSRPINTP 161
           ++Q   +P  P PQ QQ  P+ P  QP +   +PL    +P+  P
Sbjct: 113 MQQPVQQPVQPAPQPQQVQPSAPPVQPPQQQPAPLSQAPQPVAQP 157


>sp|A6PVC2|TTLL8_HUMAN Tubulin--tyrosine ligase-like protein 8
           OS=Homo sapiens GN=TTLL8 PE=1 SV=3
          Length = 814

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 17/43 (39%), Positives = 20/43 (46%)
 Frame = -3

Query: 265 PNPQYQQNMPANPWYQPNRLALSPLRYVSRPINTPQGVERPRP 137
           PN       PA  W  PN+L   PL  V R + T +G  RP P
Sbjct: 670 PNTGVPVAQPAKSW-DPNQLNAHPLEPVLRGLKTAEGALRPPP 711


>sp|P80198|HOG3_HORVU Gamma-hordein-3 OS=Hordeum vulgare PE=1 SV=1
          Length = 289

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 16/54 (29%), Positives = 23/54 (42%)
 Frame = -3

Query: 274 PYHPNPQYQQNMPANPWYQPNRLALSPLRYVSRPINTPQGVERPRPMLGHQPPL 113
           P  P  Q+ Q MP  P  QP      P     +P+ T Q   + +P+   QP +
Sbjct: 81  PLQPQQQFPQQMPLQPQQQPQFPQQKPFGQYQQPL-TQQPYPQQQPLAQQQPSI 133


>sp|O60885|BRD4_HUMAN Bromodomain-containing protein 4 OS=Homo sapiens
            GN=BRD4 PE=1 SV=2
          Length = 1362

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
 Frame = -3

Query: 292  RQVRDRPYHPNPQYQQNMPANPWYQPNR-LALSPLRY---VSRPINTPQGVERPRPMLGH 125
            +Q++ +P  P P   Q  P      P R + L P+++   + +P   PQG + P P  G 
Sbjct: 968  QQLQQQPPPPPPPQPQPPPQQQHQPPPRPVHLQPMQFSTHIQQP-PPPQGQQPPHPPPGQ 1026

Query: 124  QPP 116
            QPP
Sbjct: 1027 QPP 1029


>sp|P06600|PRP33_DAUCA Proline-rich 33 kDa extensin-related protein
           (Fragment) OS=Daucus carota PE=2 SV=1
          Length = 211

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 6/57 (10%)
 Frame = -3

Query: 265 PNPQYQQNMPANPWYQP---NRLALSPLRYVSRPINTPQGVERP---RPMLGHQPPL 113
           P P+++  +   P ++P   N  +++   Y + PI+ PQ + RP   +P   H+PP+
Sbjct: 94  PAPEHKPPVHKPPIHKPPVHNTPSVTDDHYPAHPIHKPQPIHRPPVHKPPTEHKPPV 150


>sp|Q7MQ86|PLSB_VIBVY Glycerol-3-phosphate acyltransferase OS=Vibrio
           vulnificus (strain YJ016) GN=plsB PE=3 SV=1
          Length = 809

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +2

Query: 344 GTPLLFRIWLRQHSALWCQMISPIG*ASPQW 436
           G P+    +L +H+  W + I P+G + PQW
Sbjct: 470 GEPIPLNQYLNEHAPEWTKDIDPMGASRPQW 500
tr_hit_id Q4UFX4
Definition tr|Q4UFX4|Q4UFX4_THEAN Conserved Theileria-specific sub-telomeric protein, SVSP family OS=Theileria annulata
Align length 65
Score (bit) 36.2
E-value 0.83
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917396|Adiantum capillus-veneris mRNA, clone:
YMU001_000100_C09.
         (459 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q4UFX4|Q4UFX4_THEAN Conserved Theileria-specific sub-telomeri...    36   0.83 
tr|B4G6S5|B4G6S5_DROPE GL19097 OS=Drosophila persimilis GN=GL190...    36   1.1  
tr|B6PVG2|B6PVG2_BRAFL Putative uncharacterized protein OS=Branc...    35   1.9  
tr|A2YLV2|A2YLV2_ORYSI Putative uncharacterized protein OS=Oryza...    35   2.4  
tr|B4K7A5|B4K7A5_DROMO GI23450 OS=Drosophila mojavensis GN=GI234...    35   2.4  
tr|A0E7X4|A0E7X4_PARTE Chromosome undetermined scaffold_81, whol...    35   2.4  
tr|Q5KB00|Q5KB00_CRYNE Rho guanyl-nucleotide exchange factor, pu...    35   2.4  
tr|Q55MM5|Q55MM5_CRYNE Putative uncharacterized protein OS=Crypt...    35   2.4  
tr|B8PP02|B8PP02_9APHY Predicted protein OS=Postia placenta Mad-...    35   2.4  
tr|B4IZ89|B4IZ89_DROGR GH15806 OS=Drosophila grimshawi GN=GH1580...    34   3.2  
tr|A2VCL9|A2VCL9_HUMAN PRB4 protein (Fragment) OS=Homo sapiens G...    34   3.2  
tr|B8MBV0|B8MBV0_9EURO SNF2 family helicase/ATPase (Ino80), puta...    34   4.1  
tr|A1CNX8|A1CNX8_ASPCL Serine/threonine protein kinase (Kin4), p...    34   4.1  
tr|A8WE74|A8WE74_DANRE Bromodomain 4 OS=Danio rerio GN=brd4 PE=2...    33   5.4  
tr|A9P100|A9P100_PICSI Putative uncharacterized protein OS=Picea...    33   5.4  
tr|Q4UDS0|Q4UDS0_THEAN Putative uncharacterized protein OS=Theil...    33   5.4  
tr|A3FQ94|A3FQ94_CRYPV Putative uncharacterized protein OS=Crypt...    33   5.4  
tr|Q0CLP0|Q0CLP0_ASPTN Putative uncharacterized protein OS=Asper...    33   5.4  
tr|A3Q3P7|A3Q3P7_MYCSJ Putative uncharacterized protein OS=Mycob...    33   7.1  
tr|B0WJM9|B0WJM9_CULQU Titin OS=Culex quinquefasciatus GN=CpipJ_...    33   7.1  
tr|Q4TH67|Q4TH67_TETNG Chromosome undetermined SCAF3189, whole g...    33   9.2  
tr|A0K051|A0K051_ARTS2 Putative uncharacterized protein OS=Arthr...    33   9.2  
tr|Q17IU1|Q17IU1_AEDAE Signal transducing adapter molecule (Stam...    33   9.2  
tr|B6MGY1|B6MGY1_BRAFL Putative uncharacterized protein OS=Branc...    33   9.2  
tr|B4J4M4|B4J4M4_DROGR GH22146 OS=Drosophila grimshawi GN=GH2214...    33   9.2  

>tr|Q4UFX4|Q4UFX4_THEAN Conserved Theileria-specific sub-telomeric
           protein, SVSP family OS=Theileria annulata GN=TA19005
           PE=4 SV=1
          Length = 607

 Score = 36.2 bits (82), Expect = 0.83
 Identities = 23/65 (35%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
 Frame = -3

Query: 277 RPYHPNPQYQQNMPANPWYQPNRLALSPLRYVSRP-INTPQGVERP-RPMLGHQPPLSG* 104
           RPY P PQYQQ  P  P  QP      P     +P    P   + P +P  G   P  G 
Sbjct: 289 RPYQPQPQYQQPTPLQPPQQPYYGPYQPQGQFGQPQYQQPTPPQEPQQPYYGPYQPGEGD 348

Query: 103 YHALV 89
           Y  L+
Sbjct: 349 YSVLI 353


>tr|B4G6S5|B4G6S5_DROPE GL19097 OS=Drosophila persimilis GN=GL19097
           PE=4 SV=1
          Length = 929

 Score = 35.8 bits (81), Expect = 1.1
 Identities = 21/59 (35%), Positives = 25/59 (42%)
 Frame = -3

Query: 301 YNLRQVRDRPYHPNPQYQQNMPANPWYQPNRLALSPLRYVSRPINTPQGVERPRPMLGH 125
           YN +Q    P  P PQY Q  P  P  QP       L+Y   P  TPQ   +P    G+
Sbjct: 222 YNAQQKLPNPQQP-PQYPQEQPYKPQQQPQNAPQQQLQY---PEYTPQQPHQPHQQFGY 276


>tr|B6PVG2|B6PVG2_BRAFL Putative uncharacterized protein
           OS=Branchiostoma floridae GN=BRAFLDRAFT_111436 PE=4 SV=1
          Length = 577

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 24/65 (36%), Positives = 27/65 (41%), Gaps = 12/65 (18%)
 Frame = -3

Query: 268 HPNPQYQQNMPA------------NPWYQPNRLALSPLRYVSRPINTPQGVERPRPMLGH 125
           +PNP YQQN PA            NP YQ N L  +PL        + Q V  P PM   
Sbjct: 47  NPNPMYQQNTPAPCEICPQHNQDPNPTYQENTLISNPL--------SNQNVVDPSPMYQE 98

Query: 124 QPPLS 110
            P  S
Sbjct: 99  NPDSS 103


>tr|A2YLV2|A2YLV2_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_26200 PE=4 SV=1
          Length = 323

 Score = 34.7 bits (78), Expect = 2.4
 Identities = 21/58 (36%), Positives = 28/58 (48%)
 Frame = -3

Query: 289 QVRDRPYHPNPQYQQNMPANPWYQPNRLALSPLRYVSRPINTPQGVERPRPMLGHQPP 116
           QV   P  P+  YQQ  P  P+YQ  +  L P  Y + P + P   ++P  M G  PP
Sbjct: 21  QVSGAPPPPHGHYQQQPPPQPYYQQQQ-PLPPHYYQAGPPHAPP-PQQPPAMWGQPPP 76


>tr|B4K7A5|B4K7A5_DROMO GI23450 OS=Drosophila mojavensis GN=GI23450
           PE=4 SV=1
          Length = 1470

 Score = 34.7 bits (78), Expect = 2.4
 Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
 Frame = -3

Query: 283 RDRP-YHPNPQYQQN---MPANPWYQPNRLALSPLRYVSRPINTPQGVERPRPMLGHQP 119
           + RP YHPNPQYQ N    PA P   P     +P  Y   P   P   ++  P++G  P
Sbjct: 583 QQRPSYHPNPQYQSNANAAPAAPETAPAGAGGAPGSYQESPPEAPSPYQQ-LPLIGSPP 640


>tr|A0E7X4|A0E7X4_PARTE Chromosome undetermined scaffold_81, whole
           genome shotgun sequence OS=Paramecium tetraurelia
           GN=GSPATT00024119001 PE=4 SV=1
          Length = 377

 Score = 34.7 bits (78), Expect = 2.4
 Identities = 23/79 (29%), Positives = 31/79 (39%), Gaps = 5/79 (6%)
 Frame = -3

Query: 274 PYHPNPQYQQNMPA-----NPWYQPNRLALSPLRYVSRPINTPQGVERPRPMLGHQPPLS 110
           PY P P Y QN P      NP YQP        + + R +  P       P    QPPL 
Sbjct: 80  PYQPGPVYPQNAPRPTQIYNPSYQPQYRQPVQQQVLPRSVQQPYSQTCQPPQQLFQPPLP 139

Query: 109 G*YHALVRYIYLDQYPKES 53
              +  ++  Y  Q  ++S
Sbjct: 140 SNQYPQLKPQYQQQLVQQS 158


>tr|Q5KB00|Q5KB00_CRYNE Rho guanyl-nucleotide exchange factor,
            putative OS=Cryptococcus neoformans GN=CNI04280 PE=4 SV=1
          Length = 1296

 Score = 34.7 bits (78), Expect = 2.4
 Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 5/59 (8%)
 Frame = -3

Query: 274  PYHPNPQY-----QQNMPANPWYQPNRLALSPLRYVSRPINTPQGVERPRPMLGHQPPL 113
            P +PN  Y     Q    +N  Y P+R+  +P   V  P  TP G   P P   H PPL
Sbjct: 1189 PAYPNVSYPGHPQQPRQTSNGAYPPHRINQAPSAGVRHPQQTPMGYGMPAP---HPPPL 1244


>tr|Q55MM5|Q55MM5_CRYNE Putative uncharacterized protein
            OS=Cryptococcus neoformans GN=CNBH4090 PE=4 SV=1
          Length = 1519

 Score = 34.7 bits (78), Expect = 2.4
 Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 5/59 (8%)
 Frame = -3

Query: 274  PYHPNPQY-----QQNMPANPWYQPNRLALSPLRYVSRPINTPQGVERPRPMLGHQPPL 113
            P +PN  Y     Q    +N  Y P+R+  +P   V  P  TP G   P P   H PPL
Sbjct: 1412 PAYPNVSYPGHPQQPRQTSNGAYPPHRINQAPSAGVRHPQQTPMGYGMPAP---HPPPL 1467


>tr|B8PP02|B8PP02_9APHY Predicted protein OS=Postia placenta
           Mad-698-R GN=POSPLDRAFT_104034 PE=4 SV=1
          Length = 600

 Score = 34.7 bits (78), Expect = 2.4
 Identities = 24/61 (39%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
 Frame = -3

Query: 289 QVRDRPYHPN-PQYQQNMPANPWYQPNRLALSPLRYVSRPINTPQGVERPRPM--LGHQP 119
           Q   +P  P  PQ QQ  PA PW Q  RL L P   +S+P   P     P P    GH  
Sbjct: 350 QQPQQPQQPQQPQSQQQRPAYPWSQ-RRLVLPPPVTISKPGVAPPTTPSPSPFPRYGHAL 408

Query: 118 P 116
           P
Sbjct: 409 P 409


>tr|B4IZ89|B4IZ89_DROGR GH15806 OS=Drosophila grimshawi GN=GH15806
           PE=4 SV=1
          Length = 582

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 19/58 (32%), Positives = 26/58 (44%)
 Frame = -3

Query: 274 PYHPNPQYQQNMPANPWYQPNRLALSPLRYVSRPINTPQGVERPRPMLGHQPPLSG*Y 101
           P  P+  Y    PA P+  P R    P +Y+  P   PQG + P+P +   PP    Y
Sbjct: 503 PVQPSKGYDYPKPAIPFPAPVRTTPQP-QYLPPPQPKPQGYDYPKPSVPFPPPTPAQY 559