BP917403 |
Clone id |
YMU001_000100_D06 |
Library |
YMU01 |
Length |
551 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000100_D06. |
Accession |
BP917403 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL4078Contig1 |
Sequence |
CTCCCACTACAACAGTCAAAACCCTCTAGAGCTTTTTAGGAATGGCCAACTTTTCCTTGC ATAGATGCTCATTGAAACAGGCCAATGACCACCAGCCATTAATCCCTCTACTTCACAAGC ACCATCCTCCTGGCTGCCTATTGTGTTGGGCCCGAGCCCTTCAAGAATACACATTCATAC TCAACTACTGCAAAGGGATCACAAATCTGAGTAGCCACACAGTTCGCCCCTATGTCTACA GAGGATCTTCCTGTTCAAACAGAGCAAATGGCTACTTTTCAACAACACAACCCAGCCATT CAGCTTATCATCCAACATCTTCAATCTCCAAATCCTTCAAATCACCAACACCGGGTTGAC ATAATTGATAGGGTGTATCTATTTGTCTTATCTGGAAACGACCCTGACATCTATGTGTCC AAAGCTTTACAGCAACATTATCTACAGTTCTACCACGCACACCCATTGACAGGACACCTG GGGCTTCACAAAATATCACAAAAGCTGTTCCATCTTCTTTATCCAATTGNCATGTTCATG TCACGTGACAC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9H195 |
Definition |
sp|Q9H195|MUC3B_HUMAN Mucin-3B (Fragment) OS=Homo sapiens |
Align length |
113 |
Score (bit) |
32.3 |
E-value |
1.6 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B7ZFS7 |
Definition |
tr|B7ZFS7|B7ZFS7_9METZ Polyprotein OS=Lubomirskia baicalensis |
Align length |
25 |
Score (bit) |
30.4 |
E-value |
0.19 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917403|Adiantum capillus-veneris mRNA, clone: YMU001_000100_D06. (551 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B7ZFS7|B7ZFS7_9METZ Polyprotein OS=Lubomirskia baicalensis PE... 30 0.19 tr|B5KG99|B5KG99_9SAUR NADH dehydrogenase subunit 4 (Fragment) O... 38 0.41 tr|B5KG62|B5KG62_9SAUR NADH dehydrogenase subunit 4 (Fragment) O... 37 0.53 tr|B4XRY4|B4XRY4_9SAUR NADH dehydrogenase subunit 4 (Fragment) O... 37 0.69 tr|B2WQU0|B2WQU0_9SAUR NADH dehydrogenase subunit 4 (Fragment) O... 37 0.69 tr|A8JPH8|A8JPH8_9SAUR NADH-ubiquinone oxidoreductase chain 4 (F... 37 0.69 tr|A8JKT8|A8JKT8_9SAUR NADH-ubiquinone oxidoreductase chain 4 (F... 37 0.69 tr|A8JKT7|A8JKT7_9SAUR NADH-ubiquinone oxidoreductase chain 4 (F... 37 0.69 tr|A8JKT3|A8JKT3_9SAUR NADH-ubiquinone oxidoreductase chain 4 (F... 37 0.69 tr|A8JKT1|A8JKT1_9SAUR NADH-ubiquinone oxidoreductase chain 4 (F... 37 0.69 tr|A8JKT0|A8JKT0_9SAUR NADH-ubiquinone oxidoreductase chain 4 (F... 37 0.69 tr|B5KG59|B5KG59_9SAUR NADH dehydrogenase subunit 4 (Fragment) O... 37 0.90 tr|B0EVI2|B0EVI2_9SAUR NADH dehydrogenase subunit 4 (Fragment) O... 37 0.90 tr|B6D997|B6D997_9SAUR NADH dehydrogenase subunit 4 (Fragment) O... 36 1.2 tr|B6CWH1|B6CWH1_9SAUR NADH dehydrogenase subunit 4 (Fragment) O... 36 1.2 tr|B5KG57|B5KG57_9SAUR NADH dehydrogenase subunit 4 (Fragment) O... 36 1.2 tr|B5KG55|B5KG55_9SAUR NADH dehydrogenase subunit 4 (Fragment) O... 36 1.2 tr|B5KG40|B5KG40_9SAUR NADH dehydrogenase subunit 4 (Fragment) O... 36 1.2 tr|B5KG98|B5KG98_9SAUR NADH dehydrogenase subunit 4 (Fragment) O... 36 1.5 tr|B5KG95|B5KG95_9SAUR NADH dehydrogenase subunit 4 (Fragment) O... 36 1.5 tr|B5KG93|B5KG93_9SAUR NADH dehydrogenase subunit 4 (Fragment) O... 36 1.5 tr|B5KG60|B5KG60_9SAUR NADH dehydrogenase subunit 4 (Fragment) O... 36 1.5 tr|B5KG53|B5KG53_9SAUR NADH dehydrogenase subunit 4 (Fragment) O... 36 1.5 tr|B5KG48|B5KG48_9SAUR NADH dehydrogenase subunit 4 (Fragment) O... 36 1.5 tr|B5KG47|B5KG47_9SAUR NADH dehydrogenase subunit 4 (Fragment) O... 36 1.5 tr|B5KG41|B5KG41_9SAUR NADH dehydrogenase subunit 4 (Fragment) O... 36 1.5 tr|B5KG38|B5KG38_9SAUR NADH dehydrogenase subunit 4 (Fragment) O... 36 1.5 tr|B5KG31|B5KG31_9SAUR NADH dehydrogenase subunit 4 (Fragment) O... 36 1.5 tr|B0EVI3|B0EVI3_9SAUR NADH dehydrogenase subunit 4 (Fragment) O... 36 1.5 tr|A8JKT4|A8JKT4_9SAUR NADH dehydrogenase subunit 4 (Fragment) O... 36 1.5
>tr|B7ZFS7|B7ZFS7_9METZ Polyprotein OS=Lubomirskia baicalensis PE=4 SV=1 Length = 1425
Score = 30.4 bits (67), Expect(2) = 0.19 Identities = 14/25 (56%), Positives = 16/25 (64%) Frame = +3
Query: 132 GCLLCWARALQEYTFILNYCKGITN 206 G L WA ALQEYT+ + Y KG N Sbjct: 874 GILCRWAIALQEYTYTILYRKGTLN 898
Score = 26.9 bits (58), Expect(2) = 0.19 Identities = 27/107 (25%), Positives = 46/107 (42%), Gaps = 24/107 (22%) Frame = +1
Query: 262 EQMATFQQHNPAIQLIIQHLQSPNPSNHQHR------------------VD-IIDRVYLF 384 E++ QQH+ + +++ L++ NP + R VD ++ R Y Sbjct: 927 EEIRHAQQHDDITKHLMEDLKATNPLSKPQRQQLQPWRRYAQIWSQLSVVDGVVCRRYTP 986
Query: 385 VLSGNDPDIYV-SKALQQHYLQFYHAHPLTGHLG----LHKISQKLF 510 +G+ + V K LQ L H HP GH G LH++ Q+ + Sbjct: 987 DPTGDVVTVPVLPKCLQHKALVECHDHPAAGHQGSQRTLHRLRQQAY 1033
>tr|B5KG99|B5KG99_9SAUR NADH dehydrogenase subunit 4 (Fragment) OS=Oligosoma zelandicum GN=ND4 PE=4 SV=1 Length = 223
Score = 37.7 bits (86), Expect = 0.41 Identities = 38/123 (30%), Positives = 51/123 (41%), Gaps = 10/123 (8%) Frame = +2
Query: 125 SSWLPIVLGPSPSRIHIHTQLLQRDHKSE*PHSSPLCLQRIFLFKQSKWLLFN------- 283 SS L + + R H T LL R LQ I + WLL N Sbjct: 87 SSVLFCLANTNYERTHSRTMLLARG------------LQLILPLMTTWWLLINLMNMALP 134
Query: 284 ---NTTQPFSLSSNIFNLQILQITNTGLT*LIGCIYLSYLETTLTSMCPKLYSNIIYSST 454 N T + +++FN L I TG+ L+ IY Y+ LT+ KL +NII + Sbjct: 135 PTINLTGELLIITSLFNWSPLTIIMTGIGTLLTAIYSLYM--FLTTQRNKLSTNIINTHP 192
Query: 455 THT 463 THT Sbjct: 193 THT 195
>tr|B5KG62|B5KG62_9SAUR NADH dehydrogenase subunit 4 (Fragment) OS=Oligosoma homalonotum GN=ND4 PE=4 SV=1 Length = 223
Score = 37.4 bits (85), Expect = 0.53 Identities = 37/123 (30%), Positives = 51/123 (41%), Gaps = 10/123 (8%) Frame = +2
Query: 125 SSWLPIVLGPSPSRIHIHTQLLQRDHKSE*PHSSPLCLQRIFLFKQSKWLLFN------- 283 SS L + + R H T LL R LQ I + WLL N Sbjct: 87 SSVLFCLANTNYERTHSRTMLLARG------------LQLILPLMTTWWLLINLMNMALP 134
Query: 284 ---NTTQPFSLSSNIFNLQILQITNTGLT*LIGCIYLSYLETTLTSMCPKLYSNIIYSST 454 N T + +++FN L + TG+ L+ IY Y+ LT+ KL +NII + Sbjct: 135 PTINLTGELLIITSLFNWSPLTVIMTGIGTLLTAIYSLYM--FLTTQRNKLSTNIINTPP 192
Query: 455 THT 463 THT Sbjct: 193 THT 195
>tr|B4XRY4|B4XRY4_9SAUR NADH dehydrogenase subunit 4 (Fragment) OS=Oligosoma nigriplantare polychroma GN=ND4 PE=4 SV=1 Length = 223
Score = 37.0 bits (84), Expect = 0.69 Identities = 38/123 (30%), Positives = 51/123 (41%), Gaps = 10/123 (8%) Frame = +2
Query: 125 SSWLPIVLGPSPSRIHIHTQLLQRDHKSE*PHSSPLCLQRIFLFKQSKWLLFN------- 283 SS L + + RIH T LL R LQ I + WLL N Sbjct: 87 SSVLFCLANTNYERIHSRTMLLARG------------LQLILPLMTTWWLLINLMNMALP 134
Query: 284 ---NTTQPFSLSSNIFNLQILQITNTGLT*LIGCIYLSYLETTLTSMCPKLYSNIIYSST 454 N T + +++FN L I TG+ L+ IY Y+ LT+ KL +N I + Sbjct: 135 PTINLTGELLIITSLFNWSPLTIIMTGVGTLLTAIYSLYM--FLTTQRNKLPTNTINTHP 192
Query: 455 THT 463 THT Sbjct: 193 THT 195
>tr|B2WQU0|B2WQU0_9SAUR NADH dehydrogenase subunit 4 (Fragment) OS=Oligosoma maccanni GN=ND4 PE=4 SV=1 Length = 223
Score = 37.0 bits (84), Expect = 0.69 Identities = 39/123 (31%), Positives = 49/123 (39%), Gaps = 10/123 (8%) Frame = +2
Query: 125 SSWLPIVLGPSPSRIHIHTQLLQRDHKSE*PHSSPLCLQRIFLFKQSKWLLFN------- 283 SS L + + R H T LL R LQ I + WLL N Sbjct: 87 SSMLFCLANTNYERTHSRTMLLARG------------LQLILPLMTTWWLLINLMNMALP 134
Query: 284 ---NTTQPFSLSSNIFNLQILQITNTGLT*LIGCIYLSYLETTLTSMCPKLYSNIIYSST 454 N T + S++FN L I TGL L+ IY Y+ LT+ KL +N I Sbjct: 135 PTINLTGELLIISSLFNWSPLTIIMTGLGTLLTAIYSLYM--FLTTQRNKLSTNTINLYP 192
Query: 455 THT 463 THT Sbjct: 193 THT 195
>tr|A8JPH8|A8JPH8_9SAUR NADH-ubiquinone oxidoreductase chain 4 (Fragment) OS=Oligosoma lineoocellatum GN=ND4 PE=3 SV=1 Length = 223
Score = 37.0 bits (84), Expect = 0.69 Identities = 38/123 (30%), Positives = 49/123 (39%), Gaps = 10/123 (8%) Frame = +2
Query: 125 SSWLPIVLGPSPSRIHIHTQLLQRDHKSE*PHSSPLCLQRIFLFKQSKWLLFN------- 283 SS L + + R H T LL R LQ I + WLL N Sbjct: 87 SSMLFCLANTNYERTHSRTMLLARG------------LQLILPLMTTWWLLINLMNMALP 134
Query: 284 ---NTTQPFSLSSNIFNLQILQITNTGLT*LIGCIYLSYLETTLTSMCPKLYSNIIYSST 454 N T + S++FN L I TG+ L+ IY Y+ LT+ KL +N I Sbjct: 135 PTINLTGELLIISSLFNWSPLTIVMTGIGTLLTAIYSLYM--FLTTQRNKLSTNTINIHP 192
Query: 455 THT 463 THT Sbjct: 193 THT 195
>tr|A8JKT8|A8JKT8_9SAUR NADH-ubiquinone oxidoreductase chain 4 (Fragment) OS=Oligosoma chloronoton GN=ND4 PE=3 SV=1 Length = 223
Score = 37.0 bits (84), Expect = 0.69 Identities = 37/123 (30%), Positives = 50/123 (40%), Gaps = 10/123 (8%) Frame = +2
Query: 125 SSWLPIVLGPSPSRIHIHTQLLQRDHKSE*PHSSPLCLQRIFLFKQSKWLLFN------- 283 SS L + + R H T LL R LQ I + WLL N Sbjct: 87 SSMLFCLANTNYERTHSRTMLLARG------------LQLILPLMTTWWLLINLMNMALP 134
Query: 284 ---NTTQPFSLSSNIFNLQILQITNTGLT*LIGCIYLSYLETTLTSMCPKLYSNIIYSST 454 N T + S++FN L I TG+ L+ +Y Y+ LT+ KL +N I + Sbjct: 135 PTINLTGELLIISSLFNWSPLTIIMTGIGTLLTAVYSLYM--FLTTQRNKLPTNTINTHP 192
Query: 455 THT 463 THT Sbjct: 193 THT 195
>tr|A8JKT7|A8JKT7_9SAUR NADH-ubiquinone oxidoreductase chain 4 (Fragment) OS=Oligosoma chloronoton GN=ND4 PE=3 SV=1 Length = 223
Score = 37.0 bits (84), Expect = 0.69 Identities = 37/123 (30%), Positives = 50/123 (40%), Gaps = 10/123 (8%) Frame = +2
Query: 125 SSWLPIVLGPSPSRIHIHTQLLQRDHKSE*PHSSPLCLQRIFLFKQSKWLLFN------- 283 SS L + + R H T LL R LQ I + WLL N Sbjct: 87 SSMLFCLANTNYERTHSRTMLLARG------------LQLILPLTTTWWLLINLMNMALP 134
Query: 284 ---NTTQPFSLSSNIFNLQILQITNTGLT*LIGCIYLSYLETTLTSMCPKLYSNIIYSST 454 N T + S++FN L I TG+ L+ +Y Y+ LT+ KL +N I + Sbjct: 135 PTINLTGELLIISSLFNWSPLTIIMTGIGTLLTAVYSLYM--FLTTQRNKLPTNTINTHP 192
Query: 455 THT 463 THT Sbjct: 193 THT 195
>tr|A8JKT3|A8JKT3_9SAUR NADH-ubiquinone oxidoreductase chain 4 (Fragment) OS=Oligosoma chloronoton GN=ND4 PE=3 SV=1 Length = 223
Score = 37.0 bits (84), Expect = 0.69 Identities = 37/123 (30%), Positives = 50/123 (40%), Gaps = 10/123 (8%) Frame = +2
Query: 125 SSWLPIVLGPSPSRIHIHTQLLQRDHKSE*PHSSPLCLQRIFLFKQSKWLLFN------- 283 SS L + + R H T LL R LQ + + WLL N Sbjct: 87 SSMLFCLANTNYERTHSRTMLLARG------------LQLVLPLMTTWWLLINLMNMALP 134
Query: 284 ---NTTQPFSLSSNIFNLQILQITNTGLT*LIGCIYLSYLETTLTSMCPKLYSNIIYSST 454 N T + S++FN L I TG+ L+ IY Y+ LT+ KL +N I + Sbjct: 135 PTINLTGELLIISSLFNWSPLTIIMTGIGTLLTAIYSLYM--FLTTQRNKLPTNTINTHP 192
Query: 455 THT 463 THT Sbjct: 193 THT 195
>tr|A8JKT1|A8JKT1_9SAUR NADH-ubiquinone oxidoreductase chain 4 (Fragment) OS=Oligosoma chloronoton GN=ND4 PE=3 SV=1 Length = 223
Score = 37.0 bits (84), Expect = 0.69 Identities = 37/123 (30%), Positives = 50/123 (40%), Gaps = 10/123 (8%) Frame = +2
Query: 125 SSWLPIVLGPSPSRIHIHTQLLQRDHKSE*PHSSPLCLQRIFLFKQSKWLLFN------- 283 SS L + + R H T LL R LQ I + WLL N Sbjct: 87 SSMLFCLANTNYERTHSRTMLLARG------------LQLILPLMTTWWLLINLMNMALP 134
Query: 284 ---NTTQPFSLSSNIFNLQILQITNTGLT*LIGCIYLSYLETTLTSMCPKLYSNIIYSST 454 N T + S++FN L I TG+ L+ +Y Y+ LT+ KL +N I + Sbjct: 135 PTINLTGELLIISSLFNWSPLTIIMTGIGTLLTAVYSLYM--FLTTQRNKLPTNTINTHP 192
Query: 455 THT 463 THT Sbjct: 193 THT 195
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