BP917404
Clone id YMU001_000100_D08
Library
Length 626
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000100_D08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GTATGGCCATCTCCATAGCCGCTTCCTCGGCAGTTGTCGCTCCTAGCTGCGCCCCCGCAG
AGAGCTTGTCAAAGAGCTTCTCTGGTCTCAAGGCCACTACCCTGTTCGCCCCCAAGAGCC
CCAACCCGCTCGCCATCTCTAATGGCAGCCGTGTGAGCGCCATGCTTGTGTGGAAGCCGT
ATGACAACAAGAAGTTCGAGACTCTGTCCTACTTGCCGCCTTTGTCAAGTGAGCAGATTG
CGAAGCAGGTGGACTTCATGGTCCGAAAAGGCTGGACCCCTTGCATTGAGTTCGACAAAA
TCGGGAGCGTGTACTGAGAGCACTTCCACGGCAGCGGCTACTACGATGGGCGGTACTGGG
TGATGTGGAAGCTGCCCATGTTTGGCTGCCAAGATGCCGCTGCTGTGCTGCGTGAAATTG
CAGAGTGCGCCAAGGAGTATCCTGAAGCCTTCATCCGCGTGCTGGGCTATGACGCTAAGA
GGCAGTGTTGCAGGTCTCCTGGCTTCCTTGTCCAGAACGCCCTCTGTCTAAACTTTCTTA
AAGCAAGCCAATTGAGTTGGCATGAATGCCTGCTTCCCATTTCCCACTGGCGCCTAACAA
GCTTGCTCTTATGAGCTTGTGTGTCC
■■Homology search results ■■ -
sp_hit_id Q40250
Definition sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Lactuca sativa
Align length 146
Score (bit) 172.0
E-value 2.0e-42
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917404|Adiantum capillus-veneris mRNA, clone:
YMU001_000100_D08.
(626 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chai... 172 2e-42
sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai... 169 1e-41
sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small cha... 168 2e-41
sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small cha... 167 3e-41
sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chai... 167 5e-41
sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chai... 166 7e-41
sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chai... 166 9e-41
sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chai... 166 1e-40
sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small ch... 166 1e-40
sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chai... 165 2e-40
sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small cha... 165 2e-40
sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chai... 164 3e-40
sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small cha... 164 3e-40
sp|P10797|RBS2B_ARATH Ribulose bisphosphate carboxylase small ch... 164 3e-40
sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chai... 164 3e-40
sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chai... 164 3e-40
sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small cha... 164 3e-40
sp|O65194|RBS_MEDSA Ribulose bisphosphate carboxylase small chai... 164 4e-40
sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small cha... 163 6e-40
sp|P00872|RBS1_LEMGI Ribulose bisphosphate carboxylase small cha... 163 6e-40
sp|P10796|RBS1B_ARATH Ribulose bisphosphate carboxylase small ch... 163 6e-40
sp|P10798|RBS3B_ARATH Ribulose bisphosphate carboxylase small ch... 163 8e-40
sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small cha... 163 8e-40
sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chai... 162 1e-39
sp|P05346|RBS1_BRANA Ribulose bisphosphate carboxylase small cha... 162 1e-39
sp|P19309|RBS3_LEMGI Ribulose bisphosphate carboxylase small cha... 162 2e-39
sp|P08135|RBS_RAPSA Ribulose bisphosphate carboxylase small chai... 161 2e-39
sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chai... 161 2e-39
sp|Q39746|RBS4_FLAPR Ribulose bisphosphate carboxylase small cha... 161 3e-39
sp|Q08186|RBS6_MESCR Ribulose bisphosphate carboxylase small cha... 160 4e-39

>sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1
Length = 181

Score = 172 bits (435), Expect = 2e-42
Identities = 81/146 (55%), Positives = 103/146 (70%), Gaps = 5/146 (3%)
Frame = +3

Query: 63 SLSKSFSGLKATTLF--APKSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLSS 230
SL+ F+GLK+ F K+ N + SNG RV M VW P KK+ETLSYLPPLS
Sbjct: 21 SLAAPFTGLKSNVAFPVTKKANNDFSSLPSNGGRVQCMKVWPPIGLKKYETLSYLPPLSD 80

Query: 231 EQIAKQVDFMVRKGWTPCIEFD-KIGSVY*EHFHGSGYYDGRYWVMWKLPMFGCQDAAAV 407
E ++K++D+++R W PC+EF+ + G VY EH H GYYDGRYW MWKLPMFGC D+A V
Sbjct: 81 EALSKEIDYLIRNKWIPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQV 140

Query: 408 LREIAECAKEYPEAFIRVLGYDAKRQ 485
++E+ EC KEYP AFIRV+G+D RQ
Sbjct: 141 MKEVGECKKEYPNAFIRVIGFDNIRQ 166


>sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Betula verrucosa GN=RBCS1 PE=2 SV=1
Length = 182

Score = 169 bits (427), Expect = 1e-41
Identities = 83/146 (56%), Positives = 104/146 (71%), Gaps = 5/146 (3%)
Frame = +3

Query: 63 SLSKSFSGLKATTLF--APKSPNPLA--ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSS 230
S+ F+ LK+T+ F K+ N + SNG RV M VW P KKFETLSYLPPLSS
Sbjct: 23 SMVAPFTCLKSTSAFPVTQKTNNDITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSS 82

Query: 231 EQIAKQVDFMVRKGWTPCIEFD-KIGSVY*EHFHGSGYYDGRYWVMWKLPMFGCQDAAAV 407
EQ+AK+VD+++RK PC+EF+ + G VY EH GYYDGRYW MWKLPMFGC D++ V
Sbjct: 83 EQLAKEVDYLLRKNLIPCLEFELEHGFVYREHNRSPGYYDGRYWTMWKLPMFGCNDSSQV 142

Query: 408 LREIAECAKEYPEAFIRVLGYDAKRQ 485
L+E+ EC K YP AFIR++G+D KRQ
Sbjct: 143 LKELEECKKAYPSAFIRIIGFDNKRQ 168


>sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small chain
SSU5A, chloroplastic OS=Lemna gibba GN=SSU5A PE=3 SV=1
Length = 177

Score = 168 bits (426), Expect = 2e-41
Identities = 81/145 (55%), Positives = 101/145 (69%), Gaps = 4/145 (2%)
Frame = +3

Query: 63 SLSKSFSGLKATTLFAP--KSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLSS 230
S+ F+GL+++ F K+ N L+ SNG RVS M VW P KKFETLSYLPPLS
Sbjct: 21 SMVAPFNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSV 80

Query: 231 EQIAKQVDFMVRKGWTPCIEFDKIGSVY*EHFHGSGYYDGRYWVMWKLPMFGCQDAAAVL 410
E +AK+VD+++R W PCIEF K G VY E+ GYYDGRYW MWKLPMFGC DA+ V+
Sbjct: 81 EDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVI 140

Query: 411 REIAECAKEYPEAFIRVLGYDAKRQ 485
E+ E K YPE F+R++G+D KRQ
Sbjct: 141 AEVEEAKKAYPEYFVRIIGFDNKRQ 165


>sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small chain
SSU5B, chloroplastic OS=Lemna gibba GN=SSU5B PE=3 SV=1
Length = 177

Score = 167 bits (424), Expect = 3e-41
Identities = 80/140 (57%), Positives = 99/140 (70%), Gaps = 4/140 (2%)
Frame = +3

Query: 78 FSGLKATTLFAP--KSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 245
F+GL+++ F K+ N L+ SNG RVS M VW P KKFETLSYLPPLS E +AK
Sbjct: 26 FNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAK 85

Query: 246 QVDFMVRKGWTPCIEFDKIGSVY*EHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAE 425
+VD+++R W PCIEF K G VY E+ GYYDGRYW MWKLPMFGC DA+ V+ E+ E
Sbjct: 86 EVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEE 145

Query: 426 CAKEYPEAFIRVLGYDAKRQ 485
K YPE F+R++G+D KRQ
Sbjct: 146 AKKAYPEYFVRIIGFDNKRQ 165


>sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Zantedeschia aethiopica GN=RBCS PE=2
SV=1
Length = 178

Score = 167 bits (422), Expect = 5e-41
Identities = 76/137 (55%), Positives = 96/137 (70%)
Frame = +3

Query: 75 SFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVD 254
S + T FA S P SNG RV M VW P KKFETLSYLPPL+ EQ+ ++VD
Sbjct: 31 SSAAFPVTRKFADSSKLP---SNGLRVRCMQVWPPEGKKKFETLSYLPPLTREQLGQEVD 87

Query: 255 FMVRKGWTPCIEFDKIGSVY*EHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAK 434
+++R GW PCIEF K+G VY E+ + GYYDGRYW MWKLPMFGC D++ VL+E+ EC+K
Sbjct: 88 YLIRNGWIPCIEFCKVGFVYREYHNSPGYYDGRYWTMWKLPMFGCTDSSQVLKEVDECSK 147

Query: 435 EYPEAFIRVLGYDAKRQ 485
YP+ F R++G+D RQ
Sbjct: 148 AYPDYFNRIIGFDNTRQ 164


>sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Trifolium repens GN=RBCS PE=3 SV=1
Length = 178

Score = 166 bits (421), Expect = 7e-41
Identities = 79/145 (54%), Positives = 106/145 (73%), Gaps = 4/145 (2%)
Frame = +3

Query: 63 SLSKSFSGLKATTLF-APKSPNPLA--ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSE 233
+L+ F+GLK++ F K N + SNGSRV+ M VW P KKFETLSYLPPL+ E
Sbjct: 20 NLATPFTGLKSSAGFPVTKKNNDITSITSNGSRVNCMQVWPPVGKKKFETLSYLPPLTDE 79

Query: 234 QIAKQVDFMVRKGWTPCIEFD-KIGSVY*EHFHGSGYYDGRYWVMWKLPMFGCQDAAAVL 410
Q+ K+V++++RKGW PC+EF+ + G V+ ++ GYYDGRYW MW+LP+FG DAA VL
Sbjct: 80 QLLKEVEYLLRKGWVPCVEFELEKGFVHRQYNSSPGYYDGRYWTMWRLPLFGTTDAAQVL 139

Query: 411 REIAECAKEYPEAFIRVLGYDAKRQ 485
+E+AEC EYPEAFIR++G+D RQ
Sbjct: 140 KEVAECKAEYPEAFIRIIGFDNVRQ 164


>sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Capsicum annuum GN=RBCS PE=2 SV=1
Length = 187

Score = 166 bits (420), Expect = 9e-41
Identities = 78/146 (53%), Positives = 100/146 (68%), Gaps = 5/146 (3%)
Frame = +3

Query: 63 SLSKSFSGLKATTLFAPKSPNPLAI----SNGSRVSAMLVWKPYDNKKFETLSYLPPLSS 230
S+ SF+GLK+ F L I SNG RV MLVW P + KK+ETLSYLP LS
Sbjct: 21 SMIASFNGLKSAASFPVTRKQDLDITSIASNGGRVECMLVWPPINKKKYETLSYLPDLSD 80

Query: 231 EQIAKQVDFMVRKGWTPCIEFD-KIGSVY*EHFHGSGYYDGRYWVMWKLPMFGCQDAAAV 407
EQ+ K+++++++KGW PC+EF+ + G VY EH GYYDGRYW MWKLPMFGC DA V
Sbjct: 81 EQLLKEIEYLLQKGWVPCLEFETEHGFVYREHHRSPGYYDGRYWTMWKLPMFGCTDATQV 140

Query: 408 LREIAECAKEYPEAFIRVLGYDAKRQ 485
L E+ E K YP+A+IR++G+D RQ
Sbjct: 141 LNEVQEAKKAYPQAWIRIIGFDNVRQ 166


>sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Helianthus annuus GN=RBCS PE=2 SV=1
Length = 178

Score = 166 bits (419), Expect = 1e-40
Identities = 78/140 (55%), Positives = 101/140 (72%), Gaps = 4/140 (2%)
Frame = +3

Query: 78 FSGLKATTLF-APKSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQ 248
F+GLK+ F K N + SNG RV M VW P KK+ETLSYLPPL+ Q+AK+
Sbjct: 25 FTGLKSNAAFPTTKKANDFSTLPSNGGRVQCMKVWPPLGLKKYETLSYLPPLTETQLAKE 84

Query: 249 VDFMVRKGWTPCIEFD-KIGSVY*EHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAE 425
VD+++RK W PC+EF+ + G VY E+ GYYDGRYW MWKLPMFGC D+A V++E+AE
Sbjct: 85 VDYLLRKKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMKELAE 144

Query: 426 CAKEYPEAFIRVLGYDAKRQ 485
C KEYP+A+IR++G+D RQ
Sbjct: 145 CKKEYPQAWIRIIGFDNVRQ 164


>sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small chain
1A, chloroplastic OS=Arabidopsis thaliana GN=RBCS-1A
PE=1 SV=2
Length = 180

Score = 166 bits (419), Expect = 1e-40
Identities = 77/141 (54%), Positives = 101/141 (71%), Gaps = 5/141 (3%)
Frame = +3

Query: 78 FSGLKATTLFAP--KSPNPLA--ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 245
F+GLK++ F K+ N + SNG RV+ M VW P KKFETLSYLP L+ ++AK
Sbjct: 24 FNGLKSSAAFPATRKANNDITSITSNGGRVNCMQVWPPIGKKKFETLSYLPDLTDSELAK 83

Query: 246 QVDFMVRKGWTPCIEFD-KIGSVY*EHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIA 422
+VD+++R W PC+EF+ + G VY EH + GYYDGRYW MWKLP+FGC D+A VL+E+
Sbjct: 84 EVDYLIRNKWIPCVEFELEHGFVYREHGNSPGYYDGRYWTMWKLPLFGCTDSAQVLKEVE 143

Query: 423 ECAKEYPEAFIRVLGYDAKRQ 485
EC KEYP AFIR++G+D RQ
Sbjct: 144 ECKKEYPNAFIRIIGFDNTRQ 164


>sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Pyrus pyrifolia GN=RBCS PE=2 SV=1
Length = 183

Score = 165 bits (417), Expect = 2e-40
Identities = 79/140 (56%), Positives = 103/140 (73%), Gaps = 4/140 (2%)
Frame = +3

Query: 78 FSGLKATTLF--APKSPNPLAI-SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQ 248
F+GLK+++ F KS + +I SNG RV M VW P KKFETLSYLPPLSSE +AK+
Sbjct: 30 FNGLKSSSAFPVTRKSNDITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSSESLAKE 89

Query: 249 VDFMVRKGWTPCIEFD-KIGSVY*EHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAE 425
VD+++RK W PC+EF+ + G VY E+ GYYDGRYW MWKLPMFGC D++ VL+E+ E
Sbjct: 90 VDYLLRKNWVPCLEFELETGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDSSQVLKELEE 149

Query: 426 CAKEYPEAFIRVLGYDAKRQ 485
K YP++FIR++G+D RQ
Sbjct: 150 AKKAYPQSFIRIIGFDNVRQ 169


tr_hit_id Q43110
Definition tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata
Align length 152
Score (bit) 270.0
E-value 4.0e-71
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917404|Adiantum capillus-veneris mRNA, clone:
YMU001_000100_D08.
(626 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c... 270 4e-71
tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small c... 185 2e-45
tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small c... 182 2e-44
tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small c... 181 3e-44
tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small c... 181 4e-44
tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small c... 181 4e-44
tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small c... 178 3e-43
tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small c... 174 5e-42
tr|A0FIP7|A0FIP7_CAMSI Ribulose bisphosphate carboxylase small c... 173 7e-42
tr|Q5I8Y4|Q5I8Y4_9FABA Ribulose bisphosphate carboxylase small c... 172 2e-41
tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small c... 172 2e-41
tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small c... 171 3e-41
tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small c... 171 3e-41
tr|A9S3R8|A9S3R8_PHYPA Ribulose bisphosphate carboxylase small c... 171 3e-41
tr|A9T9D5|A9T9D5_PHYPA Ribulose bisphosphate carboxylase small c... 169 2e-40
tr|A9TWU8|A9TWU8_PHYPA Ribulose bisphosphate carboxylase small c... 168 2e-40
tr|A9TVU8|A9TVU8_PHYPA Ribulose bisphosphate carboxylase small c... 167 4e-40
tr|A9SRS0|A9SRS0_PHYPA Ribulose bisphosphate carboxylase small c... 167 4e-40
tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small c... 167 4e-40
tr|A7LIT5|A7LIT5_9ROSI Ribulose bisphosphate carboxylase small c... 167 4e-40
tr|Q67IU5|Q67IU5_ORYSJ Ribulose bisphosphate carboxylase small c... 167 6e-40
tr|B8AHT7|B8AHT7_ORYSI Putative uncharacterized protein OS=Oryza... 167 6e-40
tr|A3A381|A3A381_ORYSJ Ribulose bisphosphate carboxylase small c... 167 6e-40
tr|A9U4X8|A9U4X8_PHYPA Ribulose bisphosphate carboxylase small c... 166 8e-40
tr|A9U4X7|A9U4X7_PHYPA Ribulose bisphosphate carboxylase small c... 166 8e-40
tr|Q9ZWG3|Q9ZWG3_9POAL Ribulose bisphosphate carboxylase small c... 166 1e-39
tr|Q6RWD8|Q6RWD8_CAPAN Ribulose bisphosphate carboxylase small c... 166 1e-39
tr|A7Q6D7|A7Q6D7_VITVI Ribulose bisphosphate carboxylase small c... 166 1e-39
tr|Q0WVH4|Q0WVH4_ARATH Ribulose bisphosphate carboxylase small c... 166 1e-39
tr|A9SCN2|A9SCN2_PHYPA Ribulose bisphosphate carboxylase small c... 166 1e-39

>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small
chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1
Length = 174

Score = 270 bits (691), Expect = 4e-71
Identities = 128/152 (84%), Positives = 140/152 (92%)
Frame = +3

Query: 60 ESLSKSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQI 239
ESLSKSFSGLKA TLFAPK NPLAISNGSR+SAMLVWKPYDNKKFETLSYLPPL+++QI
Sbjct: 20 ESLSKSFSGLKANTLFAPKCANPLAISNGSRISAMLVWKPYDNKKFETLSYLPPLTNDQI 79

Query: 240 AKQVDFMVRKGWTPCIEFDKIGSVY*EHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREI 419
AKQV++MVRKGWTPCIEFD IGSVY EHFHGSGYYDGRYW+MWKLPMFGC D+ +VLREI
Sbjct: 80 AKQVEYMVRKGWTPCIEFDTIGSVYREHFHGSGYYDGRYWIMWKLPMFGCTDSGSVLREI 139

Query: 420 AECAKEYPEAFIRVLGYDAKRQCCRSPGFLVQ 515
AECAKEYP AFIRVLG+DAKRQ + GFLV+
Sbjct: 140 AECAKEYPTAFIRVLGFDAKRQ-VQVAGFLVK 170


>tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_87740 PE=3 SV=1
Length = 179

Score = 185 bits (469), Expect = 2e-45
Identities = 90/150 (60%), Positives = 110/150 (73%), Gaps = 3/150 (2%)
Frame = +3

Query: 72 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 251
K FSGLK+TTLFA K+ ++ NGSRV M VW P KFET SYLPPL+ +QIAKQV
Sbjct: 27 KQFSGLKSTTLFASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86

Query: 252 DFMVRKGWTPCIEFDKIGSVY*EHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 422
DFM+++ PCIEFD +GSV +F G SGYYDGRYW MWKLPMFGC D+A VLREI
Sbjct: 87 DFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQ 146

Query: 423 ECAKEYPEAFIRVLGYDAKRQCCRSPGFLV 512
EC + +P ++RVLG+D+K+Q + GFLV
Sbjct: 147 ECKQSFPSCWVRVLGFDSKKQ-VQICGFLV 175


>tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_87752 PE=3 SV=1
Length = 179

Score = 182 bits (461), Expect = 2e-44
Identities = 89/150 (59%), Positives = 109/150 (72%), Gaps = 3/150 (2%)
Frame = +3

Query: 72 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 251
K FSGLK+TTL A K+ ++ NGSRV M VW P KFET SYLPPL+ +QIAKQV
Sbjct: 27 KQFSGLKSTTLSASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86

Query: 252 DFMVRKGWTPCIEFDKIGSVY*EHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 422
DFM+++ PCIEFD +GSV +F G SGYYDGRYW MWKLPMFGC D+A VLREI
Sbjct: 87 DFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQ 146

Query: 423 ECAKEYPEAFIRVLGYDAKRQCCRSPGFLV 512
EC + +P ++RVLG+D+K+Q + GFLV
Sbjct: 147 ECKQSFPSCWVRVLGFDSKKQ-VQICGFLV 175


>tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens GN=PprbcS1
PE=2 SV=1
Length = 184

Score = 181 bits (459), Expect = 3e-44
Identities = 87/150 (58%), Positives = 108/150 (72%), Gaps = 3/150 (2%)
Frame = +3

Query: 72 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 251
K+FSGLK+ TLF KS ++ NGSRV M VW P KFET SYLPPLS +QIA+QV
Sbjct: 32 KAFSGLKSATLFTSKSQQLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLSDDQIARQV 91

Query: 252 DFMVRKGWTPCIEFDKIGSVY*EHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 422
D+M+++ PCIEFD +G+V +F G SGYYDGRYW MWKLPMFGC D++ VLREI
Sbjct: 92 DYMIQQNLIPCIEFDTVGAVSRTNFSGSGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 151

Query: 423 ECAKEYPEAFIRVLGYDAKRQCCRSPGFLV 512
EC YP ++RVLG+D+K+Q + GFLV
Sbjct: 152 ECKTSYPSCWVRVLGFDSKKQ-VQICGFLV 180


>tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small
chain (Fragment) OS=Physcomitrella patens PE=2 SV=1
Length = 214

Score = 181 bits (458), Expect = 4e-44
Identities = 86/150 (57%), Positives = 110/150 (73%), Gaps = 3/150 (2%)
Frame = +3

Query: 72 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 251
K+FSGLK+ TLF+ K+ ++ NGSRV M VW P KFET SYLPPL+ +QIAKQV
Sbjct: 62 KAFSGLKSATLFSGKTQKLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 121

Query: 252 DFMVRKGWTPCIEFDKIGSVY*EHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 422
D+M+++ PCIEFD +GSV +F G SGYYDGRYW MWKLPMFGC D++ VLREI
Sbjct: 122 DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 181

Query: 423 ECAKEYPEAFIRVLGYDAKRQCCRSPGFLV 512
EC ++P ++RVLG+D+K+Q + GFLV
Sbjct: 182 ECKSQFPSCWVRVLGFDSKKQ-VQICGFLV 210


>tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_221004 PE=3 SV=1
Length = 184

Score = 181 bits (458), Expect = 4e-44
Identities = 87/150 (58%), Positives = 109/150 (72%), Gaps = 3/150 (2%)
Frame = +3

Query: 72 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 251
K+FSGLK TLF+ K+ A+ NGSRV M VW P KFET SYLPPL+ +QIAKQV
Sbjct: 32 KAFSGLKPATLFSSKTQKLGAVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 91

Query: 252 DFMVRKGWTPCIEFDKIGSVY*EHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 422
D+M+++ PCIEFD +GSV +F G SGYYDGRYW MWKLPMFGC D++ VLREI
Sbjct: 92 DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 151

Query: 423 ECAKEYPEAFIRVLGYDAKRQCCRSPGFLV 512
EC ++P ++RVLG+D+K+Q + GFLV
Sbjct: 152 ECKSQFPSCWVRVLGFDSKKQ-VQICGFLV 180


>tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_225236 PE=3 SV=1
Length = 183

Score = 178 bits (451), Expect = 3e-43
Identities = 84/150 (56%), Positives = 110/150 (73%), Gaps = 3/150 (2%)
Frame = +3

Query: 72 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 251
K+FSGLK+ TLF+ ++ ++ NGSRV M VW P KFET SYLPPL+ ++IAKQV
Sbjct: 31 KAFSGLKSATLFSSQAQTLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDEIAKQV 90

Query: 252 DFMVRKGWTPCIEFDKIGSVY*EHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 422
D+M+++ PCIEFD +GSV +F G SGYYDGRYW MWKLPMFGC D++ VLREI
Sbjct: 91 DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 150

Query: 423 ECAKEYPEAFIRVLGYDAKRQCCRSPGFLV 512
EC ++P ++RVLG+D+K+Q + GFLV
Sbjct: 151 ECKTQFPSCWVRVLGFDSKKQ-VQICGFLV 179


>tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small
chain OS=Lactuca sativa PE=2 SV=1
Length = 181

Score = 174 bits (440), Expect = 5e-42
Identities = 81/146 (55%), Positives = 104/146 (71%), Gaps = 5/146 (3%)
Frame = +3

Query: 63 SLSKSFSGLKATTLF--APKSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLSS 230
SL+ F+GLK+ F K+ N + SNG RV M VW P KK+ETLSYLPPLS
Sbjct: 21 SLAAPFTGLKSNVAFPVTKKANNDFSSLPSNGGRVQCMKVWPPIGLKKYETLSYLPPLSD 80

Query: 231 EQIAKQVDFMVRKGWTPCIEFD-KIGSVY*EHFHGSGYYDGRYWVMWKLPMFGCQDAAAV 407
E ++K++D+++R W PC+EF+ + G VY EH H GYYDGRYW MWKLPMFGC D+A V
Sbjct: 81 EALSKEIDYLIRNKWVPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQV 140

Query: 408 LREIAECAKEYPEAFIRVLGYDAKRQ 485
++E+ EC KEYP AFIRV+G+D+ RQ
Sbjct: 141 MKEVGECKKEYPNAFIRVIGFDSVRQ 166


>tr|A0FIP7|A0FIP7_CAMSI Ribulose bisphosphate carboxylase small
chain OS=Camellia sinensis GN=rbcS PE=2 SV=1
Length = 176

Score = 173 bits (439), Expect = 7e-42
Identities = 84/160 (52%), Positives = 106/160 (66%), Gaps = 12/160 (7%)
Frame = +3

Query: 63 SLSKSFSGLKATTLFAPKSPNPLAI----SNGSRVSAMLVWKPYDNKKFETLSYLPPLSS 230
S++ F+GLK+T+ F I SNG RV M VW P KKFETLSYLPPL+
Sbjct: 17 SMAAPFTGLKSTSAFPVTRKLDTDITSLASNGGRVQCMKVWPPLGLKKFETLSYLPPLTQ 76

Query: 231 EQIAKQVDFMVRKGWTPCIEFDKIGS-VY*EHFHGSGYYDGRYWVMWKLPMFGCQDAAAV 407
Q+ K+VD+++R GW PC+EF G VY EH GYYDGRYW MWKLPMFGC D++ V
Sbjct: 77 AQLGKEVDYLIRLGWIPCLEFSVQGGFVYREHNKSPGYYDGRYWTMWKLPMFGCTDSSQV 136

Query: 408 LREIAECAKEYPEAFIRVLGYDAKRQ-------CCRSPGF 506
L+E+ EC KEYP++FIR++G+D KRQ C + PGF
Sbjct: 137 LKEVEECKKEYPQSFIRIIGFDNKRQVQCISFICYKPPGF 176


>tr|Q5I8Y4|Q5I8Y4_9FABA Ribulose bisphosphate carboxylase small
chain OS=Ammopiptanthus mongolicus PE=2 SV=1
Length = 174

Score = 172 bits (435), Expect = 2e-41
Identities = 80/146 (54%), Positives = 103/146 (70%), Gaps = 5/146 (3%)
Frame = +3

Query: 63 SLSKSFSGLKATTLF-APKSPNP---LAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSS 230
S+ F+GLK+ F P+ N +NG RV MLVW P KKFETLSYLPPLS
Sbjct: 13 SMGAPFTGLKSMASFPVPRKVNSDITTIANNGGRVQCMLVWPPLGRKKFETLSYLPPLSI 72

Query: 231 EQIAKQVDFMVRKGWTPCIEFD-KIGSVY*EHFHGSGYYDGRYWVMWKLPMFGCQDAAAV 407
E + K+V++++RKGW PC+EF+ + G VY E+ GYYDGRYW MWKLPMFGC DA+ V
Sbjct: 73 ESLTKEVEYLLRKGWVPCLEFELEHGFVYRENNRSPGYYDGRYWTMWKLPMFGCSDASQV 132

Query: 408 LREIAECAKEYPEAFIRVLGYDAKRQ 485
++E+ EC KEYP AF+R++G+D KRQ
Sbjct: 133 MKELEECKKEYPTAFVRIIGFDNKRQ 158