BP917410 |
Clone id |
YMU001_000100_E02 |
Library |
YMU01 |
Length |
505 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000100_E02. |
Accession |
BP917410 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1264Contig1 |
Sequence |
ATGCAACAGGCTGGTCTTGTTAAAGAACATGTTGAAAGAAGCAGAGAGGAACTCATATCA AAGACACGGCTGGTCCAAAATATGCAGTCCCATCTCAAGCCAGATCAGGAAGAACATTTG AAGCAGTTTCCACTAAAAGTTGTAGTTCAGAGTTGTGTGAAACGCTGGTTCAAGGAGCAT TTGAGAAATGCAGAGAAGGGTGATTCAGGTGCTCAAGTTATGGTTGGACAGATGATCTCC CATGGGTATGGAGTTCCGAAGGATGTTCTGAAGGGAAAAGCATGGATTAAGAGAGGACAC AGCAGACAAAGCCAGATTAAAGAGCTGTGTGAAAAAAAGAGGTCGGAGGAAGAGGAACTC TATTTTATGTGATGATATTTCGTGGAGCCTGTTACCTGCGTGCCAAACAAAGTTTCTCAG AGCCAAGCATTCAATTGGTAACATTCGGCTTAACCTGCAACCTTGTATGAGCCATGCCTG CTGCCCGTTGATTGTGGCTGAGAAC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
A2SHT9 |
Definition |
sp|A2SHT9|MDH_METPP Malate dehydrogenase OS=Methylibium petroleiphilum (strain PM1) |
Align length |
34 |
Score (bit) |
31.6 |
E-value |
2.2 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9P1L8 |
Definition |
tr|A9P1L8|A9P1L8_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
104 |
Score (bit) |
81.3 |
E-value |
2.0e-14 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917410|Adiantum capillus-veneris mRNA, clone: YMU001_000100_E02. (505 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9P1L8|A9P1L8_PICSI Putative uncharacterized protein OS=Picea... 81 2e-14 tr|Q9FLB8|Q9FLB8_ARATH Genomic DNA, chromosome 5, TAC clone:K18I... 75 2e-12 tr|Q84W16|Q84W16_ARATH Putative uncharacterized protein At5g0536... 75 2e-12 tr|Q3E9L2|Q3E9L2_ARATH Uncharacterized protein At5g05360.2 (At5g... 75 2e-12 tr|A7Q3R7|A7Q3R7_VITVI Chromosome chr13 scaffold_48, whole genom... 74 3e-12 tr|A7QFH8|A7QFH8_VITVI Chromosome chr8 scaffold_88, whole genome... 74 4e-12 tr|O80906|O80906_ARATH Expressed protein (At2g38450) OS=Arabidop... 67 5e-10 tr|Q5W6N1|Q5W6N1_ORYSJ Os05g0342900 protein OS=Oryza sativa subs... 67 6e-10 tr|A2Y3E1|A2Y3E1_ORYSI Putative uncharacterized protein OS=Oryza... 67 6e-10 tr|Q8LEQ5|Q8LEQ5_ARATH Putative uncharacterized protein OS=Arabi... 65 2e-09 tr|A8IVI2|A8IVI2_CHLRE Predicted protein OS=Chlamydomonas reinha... 65 2e-09 tr|B6SI80|B6SI80_MAIZE Putative uncharacterized protein OS=Zea m... 64 4e-09 tr|B6TG32|B6TG32_MAIZE Putative uncharacterized protein OS=Zea m... 63 9e-09 tr|B6T1M8|B6T1M8_MAIZE Putative uncharacterized protein OS=Zea m... 61 3e-08 tr|B6TNI0|B6TNI0_MAIZE Putative uncharacterized protein OS=Zea m... 59 1e-07 tr|Q10MR3|Q10MR3_ORYSJ Os03g0298600 protein OS=Oryza sativa subs... 59 1e-07 tr|A3AH17|A3AH17_ORYSJ Putative uncharacterized protein OS=Oryza... 59 1e-07 tr|A9THX4|A9THX4_PHYPA Predicted protein OS=Physcomitrella paten... 56 1e-06 tr|A5Z8T5|A5Z8T5_9FIRM Putative uncharacterized protein OS=Eubac... 46 9e-04 tr|A4SB24|A4SB24_OSTLU Predicted protein OS=Ostreococcus lucimar... 44 0.003 tr|B4U9J8|B4U9J8_HYDS0 Sel1 domain protein repeat-containing pro... 44 0.006 tr|A8HVT5|A8HVT5_CHLRE Predicted protein OS=Chlamydomonas reinha... 43 0.010 tr|A2UVT6|A2UVT6_SHEPU Sel1-like repeat OS=Shewanella putrefacie... 41 0.037 tr|Q89HG7|Q89HG7_BRAJA Bll6024 protein OS=Bradyrhizobium japonic... 40 0.049 tr|B3ESE2|B3ESE2_AMOA5 Putative uncharacterized protein OS=Amoeb... 40 0.049 tr|Q1E2G0|Q1E2G0_COCIM Putative uncharacterized protein OS=Cocci... 40 0.049 tr|B8M2Y1|B8M2Y1_9EURO Ubiquitin-protein ligase Sel1/Ubx2, putat... 40 0.049 tr|Q3J7N8|Q3J7N8_NITOC Sel1-like repeat protein OS=Nitrosococcus... 40 0.064 tr|B8IML9|B8IML9_METNO Sel1 domain protein repeat-containing pro... 40 0.064 tr|B6C4U5|B6C4U5_9GAMM Sel1 repeat family OS=Nitrosococcus ocean... 40 0.064
>tr|A9P1L8|A9P1L8_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 144
Score = 81.3 bits (199), Expect = 2e-14 Identities = 38/104 (36%), Positives = 61/104 (58%) Frame = +1
Query: 7 QAGLVKEHVERSREELISKTRLVQNMQSHLKPDQEEHLKQFPLKVVVQSCVKRWFKEHLR 186 +AG V E V + ++ +V ++K E + PLK VV C +RWF++ L+ Sbjct: 16 KAGNVAETVVKVKKTAKFVDNIVSTSSINMKMQSGEEQNRLPLKEVVADCARRWFQDSLK 75
Query: 187 NAEKGDSGAQVMVGQMISHGYGVPKDVLKGKAWIKRGHSRQSQI 318 A+ GD+G QV+VGQM GYGV +D+ +GKAW ++ +S++ Sbjct: 76 EAKAGDTGMQVLVGQMYCSGYGVHRDIQRGKAWFQKAAKSRSRV 119
>tr|Q9FLB8|Q9FLB8_ARATH Genomic DNA, chromosome 5, TAC clone:K18I23 OS=Arabidopsis thaliana PE=4 SV=1 Length = 179
Score = 75.1 bits (183), Expect = 2e-12 Identities = 32/65 (49%), Positives = 45/65 (69%) Frame = +1
Query: 118 LKQFPLKVVVQSCVKRWFKEHLRNAEKGDSGAQVMVGQMISHGYGVPKDVLKGKAWIKRG 297 + + PL VV+ CV+RWF++ L+ A+ GD G QV+VGQM GYG+PKD KG+AWI + Sbjct: 75 INRVPLAQVVEDCVRRWFQDTLKEAKSGDVGMQVLVGQMYCSGYGIPKDENKGRAWINKA 134
Query: 298 HSRQS 312 +S Sbjct: 135 SRTRS 139
>tr|Q84W16|Q84W16_ARATH Putative uncharacterized protein At5g05360 (Fragment) OS=Arabidopsis thaliana GN=At5g05360 PE=2 SV=1 Length = 157
Score = 75.1 bits (183), Expect = 2e-12 Identities = 32/65 (49%), Positives = 45/65 (69%) Frame = +1
Query: 118 LKQFPLKVVVQSCVKRWFKEHLRNAEKGDSGAQVMVGQMISHGYGVPKDVLKGKAWIKRG 297 + + PL VV+ CV+RWF++ L+ A+ GD G QV+VGQM GYG+PKD KG+AWI + Sbjct: 69 INRVPLAQVVEDCVRRWFQDTLKEAKSGDVGMQVLVGQMYCSGYGIPKDENKGRAWINKA 128
Query: 298 HSRQS 312 +S Sbjct: 129 SRTRS 133
>tr|Q3E9L2|Q3E9L2_ARATH Uncharacterized protein At5g05360.2 (At5g05360) OS=Arabidopsis thaliana GN=At5g05360 PE=2 SV=1 Length = 153
Score = 75.1 bits (183), Expect = 2e-12 Identities = 32/65 (49%), Positives = 45/65 (69%) Frame = +1
Query: 118 LKQFPLKVVVQSCVKRWFKEHLRNAEKGDSGAQVMVGQMISHGYGVPKDVLKGKAWIKRG 297 + + PL VV+ CV+RWF++ L+ A+ GD G QV+VGQM GYG+PKD KG+AWI + Sbjct: 75 INRVPLAQVVEDCVRRWFQDTLKEAKSGDVGMQVLVGQMYCSGYGIPKDENKGRAWINKA 134
Query: 298 HSRQS 312 +S Sbjct: 135 SRTRS 139
>tr|A7Q3R7|A7Q3R7_VITVI Chromosome chr13 scaffold_48, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00029389001 PE=4 SV=1 Length = 156
Score = 74.3 bits (181), Expect = 3e-12 Identities = 34/73 (46%), Positives = 46/73 (63%) Frame = +1
Query: 94 LKPDQEEHLKQFPLKVVVQSCVKRWFKEHLRNAEKGDSGAQVMVGQMISHGYGVPKDVLK 273 LK + E ++ PL VV C KRWF++ L+ A+ GD+ QV+VGQM GYGV +D K Sbjct: 57 LKMESSEGQRRMPLAQVVSDCAKRWFQDTLKEAKAGDTTMQVLVGQMYFSGYGVSRDAQK 116
Query: 274 GKAWIKRGHSRQS 312 G+AWI R +S Sbjct: 117 GRAWISRASKSRS 129
>tr|A7QFH8|A7QFH8_VITVI Chromosome chr8 scaffold_88, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00037427001 PE=4 SV=1 Length = 100
Score = 73.9 bits (180), Expect = 4e-12 Identities = 34/72 (47%), Positives = 45/72 (62%) Frame = +1
Query: 103 DQEEHLKQFPLKVVVQSCVKRWFKEHLRNAEKGDSGAQVMVGQMISHGYGVPKDVLKGKA 282 D+ H + PL VV CVKRWF++ LR A+ GD QV+VGQM GYGVP+D KG+ Sbjct: 7 DRSHH--RVPLSEVVSDCVKRWFQDTLREAKSGDVSMQVLVGQMYYSGYGVPRDAQKGRV 64
Query: 283 WIKRGHSRQSQI 318 W+ R +S + Sbjct: 65 WMTRASRTRSSV 76
>tr|O80906|O80906_ARATH Expressed protein (At2g38450) OS=Arabidopsis thaliana GN=At2g38450 PE=2 SV=2 Length = 105
Score = 67.0 bits (162), Expect = 5e-10 Identities = 30/63 (47%), Positives = 39/63 (61%) Frame = +1
Query: 130 PLKVVVQSCVKRWFKEHLRNAEKGDSGAQVMVGQMISHGYGVPKDVLKGKAWIKRGHSRQ 309 PL VV C KRWFK+ L A+ G+ QV++GQM GYGVPKD KG+ WI + + Sbjct: 23 PLSSVVSDCAKRWFKDTLEEAKAGNITMQVLLGQMYYSGYGVPKDARKGRLWITKASRVR 82
Query: 310 SQI 318 S + Sbjct: 83 SSV 85
>tr|Q5W6N1|Q5W6N1_ORYSJ Os05g0342900 protein OS=Oryza sativa subsp. japonica GN=P0015F11.6 PE=4 SV=1 Length = 103
Score = 66.6 bits (161), Expect = 6e-10 Identities = 28/55 (50%), Positives = 39/55 (70%) Frame = +1
Query: 130 PLKVVVQSCVKRWFKEHLRNAEKGDSGAQVMVGQMISHGYGVPKDVLKGKAWIKR 294 PL VV CV+RWF++ L+ A +GDS QV+V QM GYG+PK+ KG+AW ++ Sbjct: 15 PLSEVVGDCVQRWFQDALKEARRGDSAMQVLVAQMYHSGYGIPKNEHKGRAWAEK 69
>tr|A2Y3E1|A2Y3E1_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_19526 PE=4 SV=1 Length = 103
Score = 66.6 bits (161), Expect = 6e-10 Identities = 28/55 (50%), Positives = 39/55 (70%) Frame = +1
Query: 130 PLKVVVQSCVKRWFKEHLRNAEKGDSGAQVMVGQMISHGYGVPKDVLKGKAWIKR 294 PL VV CV+RWF++ L+ A +GDS QV+V QM GYG+PK+ KG+AW ++ Sbjct: 15 PLSEVVGDCVQRWFQDALKEARRGDSAMQVLVAQMYHSGYGIPKNEHKGRAWAEK 69
>tr|Q8LEQ5|Q8LEQ5_ARATH Putative uncharacterized protein OS=Arabidopsis thaliana PE=4 SV=1 Length = 105
Score = 64.7 bits (156), Expect = 2e-09 Identities = 29/63 (46%), Positives = 38/63 (60%) Frame = +1
Query: 130 PLKVVVQSCVKRWFKEHLRNAEKGDSGAQVMVGQMISHGYGVPKDVLKGKAWIKRGHSRQ 309 PL VV C K WFK+ L A+ G+ QV++GQM GYGVPKD KG+ WI + + Sbjct: 23 PLSSVVSDCAKXWFKDTLEEAKAGNITMQVLLGQMYYSGYGVPKDAKKGRLWITKASRVR 82
Query: 310 SQI 318 S + Sbjct: 83 SSV 85
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