BP917410
Clone id YMU001_000100_E02
Library
Length 505
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000100_E02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
ATGCAACAGGCTGGTCTTGTTAAAGAACATGTTGAAAGAAGCAGAGAGGAACTCATATCA
AAGACACGGCTGGTCCAAAATATGCAGTCCCATCTCAAGCCAGATCAGGAAGAACATTTG
AAGCAGTTTCCACTAAAAGTTGTAGTTCAGAGTTGTGTGAAACGCTGGTTCAAGGAGCAT
TTGAGAAATGCAGAGAAGGGTGATTCAGGTGCTCAAGTTATGGTTGGACAGATGATCTCC
CATGGGTATGGAGTTCCGAAGGATGTTCTGAAGGGAAAAGCATGGATTAAGAGAGGACAC
AGCAGACAAAGCCAGATTAAAGAGCTGTGTGAAAAAAAGAGGTCGGAGGAAGAGGAACTC
TATTTTATGTGATGATATTTCGTGGAGCCTGTTACCTGCGTGCCAAACAAAGTTTCTCAG
AGCCAAGCATTCAATTGGTAACATTCGGCTTAACCTGCAACCTTGTATGAGCCATGCCTG
CTGCCCGTTGATTGTGGCTGAGAAC
■■Homology search results ■■ -
sp_hit_id A2SHT9
Definition sp|A2SHT9|MDH_METPP Malate dehydrogenase OS=Methylibium petroleiphilum (strain PM1)
Align length 34
Score (bit) 31.6
E-value 2.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917410|Adiantum capillus-veneris mRNA, clone:
YMU001_000100_E02.
(505 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|A2SHT9|MDH_METPP Malate dehydrogenase OS=Methylibium petrolei... 32 2.2
sp|A6H751|FOLC_BOVIN Folylpolyglutamate synthase, mitochondrial ... 30 4.9
sp|Q5UP92|YL018_MIMIV Putative sel1-like repeat-containing prote... 30 6.5
sp|Q80W03|TOX3_MOUSE TOX high mobility group box family member 3... 30 6.5
sp|P60924|K0141_RAT Uncharacterized protein KIAA0141 homolog OS=... 30 6.5
sp|Q9DCV6|K0141_MOUSE Uncharacterized protein KIAA0141 OS=Mus mu... 30 6.5
sp|Q60943|I17RA_MOUSE Interleukin-17 receptor A OS=Mus musculus ... 30 6.5
sp|P34247|UTP11_YEAST U3 small nucleolar RNA-associated protein ... 30 8.4

>sp|A2SHT9|MDH_METPP Malate dehydrogenase OS=Methylibium
petroleiphilum (strain PM1) GN=mdh PE=3 SV=1
Length = 328

Score = 31.6 bits (70), Expect = 2.2
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +1

Query: 175 EHLRNAEKGDSGAQVMVGQMISHGYGVPKDVLKG 276
+H+R+ G +GA V +G + YG+PKDV+ G
Sbjct: 251 DHMRDWALGTNGAWVTMGVPSNGEYGIPKDVMFG 284


>sp|A6H751|FOLC_BOVIN Folylpolyglutamate synthase, mitochondrial
OS=Bos taurus GN=FPGS PE=2 SV=1
Length = 585

Score = 30.4 bits (67), Expect = 4.9
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +1

Query: 145 VQSCVKRWFKEHLRNAEKGDSGAQVMV 225
+Q+CV RWF++ L E+ DSG++V V
Sbjct: 383 MQACV-RWFRQALHRCERPDSGSEVRV 408


>sp|Q5UP92|YL018_MIMIV Putative sel1-like repeat-containing protein
L18 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L18 PE=4
SV=1
Length = 584

Score = 30.0 bits (66), Expect = 6.5
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +1

Query: 190 AEKGDSGAQVMVGQMISHGYGVPKDVLKGKAWIKRGHSRQSQ 315
A+ GDS AQ +GQM G K++ K WI + + ++
Sbjct: 127 AKTGDSMAQYNLGQMYYRGISTKKNIQKAIKWITKSADQNNK 168


>sp|Q80W03|TOX3_MOUSE TOX high mobility group box family member 3
OS=Mus musculus GN=Tox3 PE=2 SV=1
Length = 575

Score = 30.0 bits (66), Expect = 6.5
Identities = 15/62 (24%), Positives = 34/62 (54%)
Frame = +1

Query: 1 MQQAGLVKEHVERSREELISKTRLVQNMQSHLKPDQEEHLKQFPLKVVVQSCVKRWFKEH 180
MQQ L + + + ++ + + +MQ HL+ Q++HL+Q + Q +++ ++H
Sbjct: 457 MQQQQLQQHQMHQQIQQQMQQQHFQHHMQQHLQQQQQQHLQQ----QLSQQQLQQQLQQH 512

Query: 181 LR 186
L+
Sbjct: 513 LQ 514


>sp|P60924|K0141_RAT Uncharacterized protein KIAA0141 homolog
OS=Rattus norvegicus PE=2 SV=1
Length = 509

Score = 30.0 bits (66), Expect = 6.5
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1

Query: 169 FKEHLRNAEKGDSGAQVMVGQMISHGYGVPKDVLK 273
F + A++G S AQ VG + HG G P+D+ K
Sbjct: 266 FSYFQKAADRGYSKAQYNVGLCLEHGRGTPRDLSK 300


>sp|Q9DCV6|K0141_MOUSE Uncharacterized protein KIAA0141 OS=Mus
musculus GN=Kiaa0141 PE=2 SV=1
Length = 510

Score = 30.0 bits (66), Expect = 6.5
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1

Query: 169 FKEHLRNAEKGDSGAQVMVGQMISHGYGVPKDVLK 273
F + A++G S AQ VG + HG G P+D+ K
Sbjct: 266 FSYFQKAADRGYSKAQYNVGLCLEHGRGTPRDLSK 300


>sp|Q60943|I17RA_MOUSE Interleukin-17 receptor A OS=Mus musculus
GN=Il17ra PE=2 SV=1
Length = 864

Score = 30.0 bits (66), Expect = 6.5
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +2

Query: 350 KRNSILCDDISWSLLPACQTKFLRAKHSIGNIRLNLQPCM 469
+RNSILC + LP C T + H G+ R L+ M
Sbjct: 713 QRNSILCLPVDSDDLPLCSTPMMSPDHLQGDAREQLESLM 752


>sp|P34247|UTP11_YEAST U3 small nucleolar RNA-associated protein 11
OS=Saccharomyces cerevisiae GN=UTP11 PE=1 SV=1
Length = 256

Score = 29.6 bits (65), Expect = 8.4
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Frame = +1

Query: 22 KEHVERSREELISKTRLVQNMQSHLKPDQEEHLKQFPLKVVVQSCVKRWFKE--HLRNAE 195
K+H ERS+ S+ ++ + ++K Q+ H KQ LKV+ + +R E H ++
Sbjct: 11 KQHRERSQLTSRSRYGFLEKHKDYVKRAQDFHRKQSTLKVLREKAKERNPDEYYHAMHSR 70

Query: 196 KGDSGAQVMVGQMISHGYGVPKD 264
K D+ G +IS +G +D
Sbjct: 71 KTDA-----KGLLISSRHGDEED 88


tr_hit_id A9P1L8
Definition tr|A9P1L8|A9P1L8_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 104
Score (bit) 81.3
E-value 2.0e-14
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917410|Adiantum capillus-veneris mRNA, clone:
YMU001_000100_E02.
(505 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9P1L8|A9P1L8_PICSI Putative uncharacterized protein OS=Picea... 81 2e-14
tr|Q9FLB8|Q9FLB8_ARATH Genomic DNA, chromosome 5, TAC clone:K18I... 75 2e-12
tr|Q84W16|Q84W16_ARATH Putative uncharacterized protein At5g0536... 75 2e-12
tr|Q3E9L2|Q3E9L2_ARATH Uncharacterized protein At5g05360.2 (At5g... 75 2e-12
tr|A7Q3R7|A7Q3R7_VITVI Chromosome chr13 scaffold_48, whole genom... 74 3e-12
tr|A7QFH8|A7QFH8_VITVI Chromosome chr8 scaffold_88, whole genome... 74 4e-12
tr|O80906|O80906_ARATH Expressed protein (At2g38450) OS=Arabidop... 67 5e-10
tr|Q5W6N1|Q5W6N1_ORYSJ Os05g0342900 protein OS=Oryza sativa subs... 67 6e-10
tr|A2Y3E1|A2Y3E1_ORYSI Putative uncharacterized protein OS=Oryza... 67 6e-10
tr|Q8LEQ5|Q8LEQ5_ARATH Putative uncharacterized protein OS=Arabi... 65 2e-09
tr|A8IVI2|A8IVI2_CHLRE Predicted protein OS=Chlamydomonas reinha... 65 2e-09
tr|B6SI80|B6SI80_MAIZE Putative uncharacterized protein OS=Zea m... 64 4e-09
tr|B6TG32|B6TG32_MAIZE Putative uncharacterized protein OS=Zea m... 63 9e-09
tr|B6T1M8|B6T1M8_MAIZE Putative uncharacterized protein OS=Zea m... 61 3e-08
tr|B6TNI0|B6TNI0_MAIZE Putative uncharacterized protein OS=Zea m... 59 1e-07
tr|Q10MR3|Q10MR3_ORYSJ Os03g0298600 protein OS=Oryza sativa subs... 59 1e-07
tr|A3AH17|A3AH17_ORYSJ Putative uncharacterized protein OS=Oryza... 59 1e-07
tr|A9THX4|A9THX4_PHYPA Predicted protein OS=Physcomitrella paten... 56 1e-06
tr|A5Z8T5|A5Z8T5_9FIRM Putative uncharacterized protein OS=Eubac... 46 9e-04
tr|A4SB24|A4SB24_OSTLU Predicted protein OS=Ostreococcus lucimar... 44 0.003
tr|B4U9J8|B4U9J8_HYDS0 Sel1 domain protein repeat-containing pro... 44 0.006
tr|A8HVT5|A8HVT5_CHLRE Predicted protein OS=Chlamydomonas reinha... 43 0.010
tr|A2UVT6|A2UVT6_SHEPU Sel1-like repeat OS=Shewanella putrefacie... 41 0.037
tr|Q89HG7|Q89HG7_BRAJA Bll6024 protein OS=Bradyrhizobium japonic... 40 0.049
tr|B3ESE2|B3ESE2_AMOA5 Putative uncharacterized protein OS=Amoeb... 40 0.049
tr|Q1E2G0|Q1E2G0_COCIM Putative uncharacterized protein OS=Cocci... 40 0.049
tr|B8M2Y1|B8M2Y1_9EURO Ubiquitin-protein ligase Sel1/Ubx2, putat... 40 0.049
tr|Q3J7N8|Q3J7N8_NITOC Sel1-like repeat protein OS=Nitrosococcus... 40 0.064
tr|B8IML9|B8IML9_METNO Sel1 domain protein repeat-containing pro... 40 0.064
tr|B6C4U5|B6C4U5_9GAMM Sel1 repeat family OS=Nitrosococcus ocean... 40 0.064

>tr|A9P1L8|A9P1L8_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 144

Score = 81.3 bits (199), Expect = 2e-14
Identities = 38/104 (36%), Positives = 61/104 (58%)
Frame = +1

Query: 7 QAGLVKEHVERSREELISKTRLVQNMQSHLKPDQEEHLKQFPLKVVVQSCVKRWFKEHLR 186
+AG V E V + ++ +V ++K E + PLK VV C +RWF++ L+
Sbjct: 16 KAGNVAETVVKVKKTAKFVDNIVSTSSINMKMQSGEEQNRLPLKEVVADCARRWFQDSLK 75

Query: 187 NAEKGDSGAQVMVGQMISHGYGVPKDVLKGKAWIKRGHSRQSQI 318
A+ GD+G QV+VGQM GYGV +D+ +GKAW ++ +S++
Sbjct: 76 EAKAGDTGMQVLVGQMYCSGYGVHRDIQRGKAWFQKAAKSRSRV 119


>tr|Q9FLB8|Q9FLB8_ARATH Genomic DNA, chromosome 5, TAC clone:K18I23
OS=Arabidopsis thaliana PE=4 SV=1
Length = 179

Score = 75.1 bits (183), Expect = 2e-12
Identities = 32/65 (49%), Positives = 45/65 (69%)
Frame = +1

Query: 118 LKQFPLKVVVQSCVKRWFKEHLRNAEKGDSGAQVMVGQMISHGYGVPKDVLKGKAWIKRG 297
+ + PL VV+ CV+RWF++ L+ A+ GD G QV+VGQM GYG+PKD KG+AWI +
Sbjct: 75 INRVPLAQVVEDCVRRWFQDTLKEAKSGDVGMQVLVGQMYCSGYGIPKDENKGRAWINKA 134

Query: 298 HSRQS 312
+S
Sbjct: 135 SRTRS 139


>tr|Q84W16|Q84W16_ARATH Putative uncharacterized protein At5g05360
(Fragment) OS=Arabidopsis thaliana GN=At5g05360 PE=2
SV=1
Length = 157

Score = 75.1 bits (183), Expect = 2e-12
Identities = 32/65 (49%), Positives = 45/65 (69%)
Frame = +1

Query: 118 LKQFPLKVVVQSCVKRWFKEHLRNAEKGDSGAQVMVGQMISHGYGVPKDVLKGKAWIKRG 297
+ + PL VV+ CV+RWF++ L+ A+ GD G QV+VGQM GYG+PKD KG+AWI +
Sbjct: 69 INRVPLAQVVEDCVRRWFQDTLKEAKSGDVGMQVLVGQMYCSGYGIPKDENKGRAWINKA 128

Query: 298 HSRQS 312
+S
Sbjct: 129 SRTRS 133


>tr|Q3E9L2|Q3E9L2_ARATH Uncharacterized protein At5g05360.2
(At5g05360) OS=Arabidopsis thaliana GN=At5g05360 PE=2
SV=1
Length = 153

Score = 75.1 bits (183), Expect = 2e-12
Identities = 32/65 (49%), Positives = 45/65 (69%)
Frame = +1

Query: 118 LKQFPLKVVVQSCVKRWFKEHLRNAEKGDSGAQVMVGQMISHGYGVPKDVLKGKAWIKRG 297
+ + PL VV+ CV+RWF++ L+ A+ GD G QV+VGQM GYG+PKD KG+AWI +
Sbjct: 75 INRVPLAQVVEDCVRRWFQDTLKEAKSGDVGMQVLVGQMYCSGYGIPKDENKGRAWINKA 134

Query: 298 HSRQS 312
+S
Sbjct: 135 SRTRS 139


>tr|A7Q3R7|A7Q3R7_VITVI Chromosome chr13 scaffold_48, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00029389001
PE=4 SV=1
Length = 156

Score = 74.3 bits (181), Expect = 3e-12
Identities = 34/73 (46%), Positives = 46/73 (63%)
Frame = +1

Query: 94 LKPDQEEHLKQFPLKVVVQSCVKRWFKEHLRNAEKGDSGAQVMVGQMISHGYGVPKDVLK 273
LK + E ++ PL VV C KRWF++ L+ A+ GD+ QV+VGQM GYGV +D K
Sbjct: 57 LKMESSEGQRRMPLAQVVSDCAKRWFQDTLKEAKAGDTTMQVLVGQMYFSGYGVSRDAQK 116

Query: 274 GKAWIKRGHSRQS 312
G+AWI R +S
Sbjct: 117 GRAWISRASKSRS 129


>tr|A7QFH8|A7QFH8_VITVI Chromosome chr8 scaffold_88, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00037427001
PE=4 SV=1
Length = 100

Score = 73.9 bits (180), Expect = 4e-12
Identities = 34/72 (47%), Positives = 45/72 (62%)
Frame = +1

Query: 103 DQEEHLKQFPLKVVVQSCVKRWFKEHLRNAEKGDSGAQVMVGQMISHGYGVPKDVLKGKA 282
D+ H + PL VV CVKRWF++ LR A+ GD QV+VGQM GYGVP+D KG+
Sbjct: 7 DRSHH--RVPLSEVVSDCVKRWFQDTLREAKSGDVSMQVLVGQMYYSGYGVPRDAQKGRV 64

Query: 283 WIKRGHSRQSQI 318
W+ R +S +
Sbjct: 65 WMTRASRTRSSV 76


>tr|O80906|O80906_ARATH Expressed protein (At2g38450) OS=Arabidopsis
thaliana GN=At2g38450 PE=2 SV=2
Length = 105

Score = 67.0 bits (162), Expect = 5e-10
Identities = 30/63 (47%), Positives = 39/63 (61%)
Frame = +1

Query: 130 PLKVVVQSCVKRWFKEHLRNAEKGDSGAQVMVGQMISHGYGVPKDVLKGKAWIKRGHSRQ 309
PL VV C KRWFK+ L A+ G+ QV++GQM GYGVPKD KG+ WI + +
Sbjct: 23 PLSSVVSDCAKRWFKDTLEEAKAGNITMQVLLGQMYYSGYGVPKDARKGRLWITKASRVR 82

Query: 310 SQI 318
S +
Sbjct: 83 SSV 85


>tr|Q5W6N1|Q5W6N1_ORYSJ Os05g0342900 protein OS=Oryza sativa subsp.
japonica GN=P0015F11.6 PE=4 SV=1
Length = 103

Score = 66.6 bits (161), Expect = 6e-10
Identities = 28/55 (50%), Positives = 39/55 (70%)
Frame = +1

Query: 130 PLKVVVQSCVKRWFKEHLRNAEKGDSGAQVMVGQMISHGYGVPKDVLKGKAWIKR 294
PL VV CV+RWF++ L+ A +GDS QV+V QM GYG+PK+ KG+AW ++
Sbjct: 15 PLSEVVGDCVQRWFQDALKEARRGDSAMQVLVAQMYHSGYGIPKNEHKGRAWAEK 69


>tr|A2Y3E1|A2Y3E1_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_19526 PE=4 SV=1
Length = 103

Score = 66.6 bits (161), Expect = 6e-10
Identities = 28/55 (50%), Positives = 39/55 (70%)
Frame = +1

Query: 130 PLKVVVQSCVKRWFKEHLRNAEKGDSGAQVMVGQMISHGYGVPKDVLKGKAWIKR 294
PL VV CV+RWF++ L+ A +GDS QV+V QM GYG+PK+ KG+AW ++
Sbjct: 15 PLSEVVGDCVQRWFQDALKEARRGDSAMQVLVAQMYHSGYGIPKNEHKGRAWAEK 69


>tr|Q8LEQ5|Q8LEQ5_ARATH Putative uncharacterized protein
OS=Arabidopsis thaliana PE=4 SV=1
Length = 105

Score = 64.7 bits (156), Expect = 2e-09
Identities = 29/63 (46%), Positives = 38/63 (60%)
Frame = +1

Query: 130 PLKVVVQSCVKRWFKEHLRNAEKGDSGAQVMVGQMISHGYGVPKDVLKGKAWIKRGHSRQ 309
PL VV C K WFK+ L A+ G+ QV++GQM GYGVPKD KG+ WI + +
Sbjct: 23 PLSSVVSDCAKXWFKDTLEEAKAGNITMQVLLGQMYYSGYGVPKDAKKGRLWITKASRVR 82

Query: 310 SQI 318
S +
Sbjct: 83 SSV 85