BP917419
Clone id YMU001_000100_E12
Library
Length 276
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000100_E12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
ATTCAAGCGAAAACAGTTGCTTCAACATTCATCCATCTGCTGTCCAAACAAAAGCCAAGA
GCGCAATCGCCAATGAGAACGTGGTCACTACCGATGCTGTAACAAATACAACAAATTGAG
ATGGTTTCTTCTCCTTGTGATCATCCTCCACCTGCTTTAGAAGCTGTCTTACATTGTTCA
CATCCCCATCCTTCGCTGCTTGCATGATTCTGCCTTCAATCTTTGCAAAAGCTTGCAGTC
TAGCCTCTTGAAGCCTATCCTTGGAAGTCCAAAGAA
■■Homology search results ■■ -
sp_hit_id Q3TYL0
Definition sp|Q3TYL0|YH010_MOUSE IQ motif and ankyrin repeat domain-containing protein LOC642574 homolog OS=Mus musculus
Align length 39
Score (bit) 30.0
E-value 3.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917419|Adiantum capillus-veneris mRNA, clone:
YMU001_000100_E12.
(276 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q3TYL0|YH010_MOUSE IQ motif and ankyrin repeat domain-contain... 30 3.8
sp|A0MZ67|SHOT1_RAT Shootin-1 OS=Rattus norvegicus PE=1 SV=1 30 4.9
sp|Q8K2Q9|SHOT1_MOUSE Shootin-1 OS=Mus musculus GN=Kiaa1598 PE=1... 30 4.9

>sp|Q3TYL0|YH010_MOUSE IQ motif and ankyrin repeat domain-containing
protein LOC642574 homolog OS=Mus musculus PE=2 SV=2
Length = 343

Score = 30.0 bits (66), Expect = 3.8
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = -3

Query: 262 KDRLQEARLQAFAKIEGRIMQAAKDGDVNNVRQLLKQVE 146
K+ +E + + R+++AA +GD+ +RQ+LK+VE
Sbjct: 178 KEEAEERARREELQRRRRLLEAAFEGDLGEIRQVLKEVE 216


>sp|A0MZ67|SHOT1_RAT Shootin-1 OS=Rattus norvegicus PE=1 SV=1
Length = 633

Score = 29.6 bits (65), Expect = 4.9
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Frame = -3

Query: 256 RLQEARLQAFAKI---EGRIMQAAKDGDVNNVRQLLKQVEDDHKE 131
+L+E R+Q K+ E R+ A +++N+RQ L+ +EDD +E
Sbjct: 275 QLEEERIQHQQKVKELEERLENEALHKEIHNLRQQLELLEDDKRE 319


>sp|Q8K2Q9|SHOT1_MOUSE Shootin-1 OS=Mus musculus GN=Kiaa1598 PE=1
SV=1
Length = 631

Score = 29.6 bits (65), Expect = 4.9
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Frame = -3

Query: 256 RLQEARLQAFAKI---EGRIMQAAKDGDVNNVRQLLKQVEDDHKE 131
+L+E R+Q K+ E R+ A +++N+RQ L+ +EDD +E
Sbjct: 275 QLEEERIQHQKKVKELEERLENEALHKEIHNLRQQLELLEDDKRE 319


tr_hit_id A9S9I4
Definition tr|A9S9I4|A9S9I4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 81
Score (bit) 52.0
E-value 2.0e-05
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917419|Adiantum capillus-veneris mRNA, clone:
YMU001_000100_E12.
(276 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9S9I4|A9S9I4_PHYPA Predicted protein OS=Physcomitrella paten... 52 2e-05
tr|A7Q7A1|A7Q7A1_VITVI Chromosome chr18 scaffold_59, whole genom... 49 1e-04
tr|A9RPY7|A9RPY7_PHYPA Predicted protein (Fragment) OS=Physcomit... 49 1e-04
tr|B8AJC0|B8AJC0_ORYSI Putative uncharacterized protein OS=Oryza... 46 0.001
tr|Q6ESY2|Q6ESY2_ORYSJ Putative uncharacterized protein P0472F10... 45 0.001
tr|B6TX64|B6TX64_MAIZE Putative uncharacterized protein OS=Zea m... 45 0.001
tr|A3A7T0|A3A7T0_ORYSJ Putative uncharacterized protein OS=Oryza... 45 0.001
tr|B8ATR5|B8ATR5_ORYSI Putative uncharacterized protein OS=Oryza... 44 0.004
tr|Q7X8A2|Q7X8A2_ORYSA OSJNBa0035I04.2 protein (OSIGBa0076I14.6 ... 43 0.007
tr|Q7F937|Q7F937_ORYSJ Os04g0423700 protein OS=Oryza sativa subs... 43 0.007
tr|A3ATW3|A3ATW3_ORYSJ Putative uncharacterized protein OS=Oryza... 43 0.007
tr|Q9XIG2|Q9XIG2_ARATH T10P12.6 protein (At1g43580/T10P12_6) OS=... 39 0.13
tr|Q8LD82|Q8LD82_ARATH Putative uncharacterized protein OS=Arabi... 39 0.13
tr|Q56YW4|Q56YW4_ARATH Putative uncharacterized protein At1g4358... 39 0.13
tr|B3MSY5|B3MSY5_DROAN GF22977 OS=Drosophila ananassae GN=GF2297... 33 9.4

>tr|A9S9I4|A9S9I4_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_126060 PE=4 SV=1
Length = 426

Score = 52.0 bits (123), Expect = 2e-05
Identities = 27/81 (33%), Positives = 43/81 (53%)
Frame = -3

Query: 274 LWTSKDRLQEARLQAFAKIEGRIMQAAKDGDVNNVRQLLKQVEDDHKEKKPXXXXXXXXX 95
+W+SKD Q+ +L+ A +E + +AAK+GD+ +R +L +V E+K
Sbjct: 346 IWSSKDHNQKLKLKHLAAMEDDLQKAAKEGDLEGIRSMLNRVSKSGAEEKASERTLLLVA 405

Query: 94 XXXXXXSLAIALLAFVWTADG 32
+L + LLAF TADG
Sbjct: 406 GSILFMTLGLGLLAFKLTADG 426


>tr|A7Q7A1|A7Q7A1_VITVI Chromosome chr18 scaffold_59, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00031752001
PE=4 SV=1
Length = 432

Score = 49.3 bits (116), Expect = 1e-04
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Frame = -3

Query: 274 LWTSKDRLQEARLQAFAKIEGRIMQAAKDGDVNNVRQLLKQVE----DDHKEKKPXXXXX 107
+W++KD + RL KI GR+ QAAKD +++ VR+LLK+VE H +
Sbjct: 348 IWSAKDASRSKRLSRLDKIHGRLTQAAKDSNMDEVRELLKEVEMGSPASHSSGRVRSRAM 407

Query: 106 XXXXXXXXXXSLAIALLAFVWTADG 32
+L + LA T+DG
Sbjct: 408 WVFACATIFSALTVVFLALTLTSDG 432


>tr|A9RPY7|A9RPY7_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_23480 PE=4 SV=1
Length = 424

Score = 48.9 bits (115), Expect = 1e-04
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Frame = -3

Query: 274 LWTSKDRLQEARLQAFAKIEGRIMQAAKDGDVNNVRQLLKQV----EDDHKEKKPXXXXX 107
+W S+D+ +E +L+ A +E I +AAKDG++ + +L +V +D+ ++ K
Sbjct: 340 IWASRDQQKELKLKLLAAVEDDIQKAAKDGNLEKITYMLNKVSTANKDNEQKDKVSYWFT 399

Query: 106 XXXXXXXXXXSLAIALLAFVWTADG 32
+L + LL F WTA+G
Sbjct: 400 MLLGCFVLFMTLGLGLLTFTWTANG 424


>tr|B8AJC0|B8AJC0_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_07583 PE=4 SV=1
Length = 463

Score = 45.8 bits (107), Expect = 0.001
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = -3

Query: 274 LWTSKDRLQEARLQAFAKIEGRIMQAAKDGDVNNVRQLLKQVEDDHKEKKP-XXXXXXXX 98
+W++ D + RL K++ R+ QAAKD D++ +R LL +VE +E+K
Sbjct: 382 IWSAIDNSRARRLAKLDKVQNRLFQAAKDSDMDEIRGLLNEVELAGQERKGFSQRVILSF 441

Query: 97 XXXXXXXSLAIALLAFVWTADG 32
+L+ LLAF T+DG
Sbjct: 442 SSAMIVFTLSCVLLAFTLTSDG 463


>tr|Q6ESY2|Q6ESY2_ORYSJ Putative uncharacterized protein P0472F10.21
OS=Oryza sativa subsp. japonica GN=P0472F10.21 PE=4 SV=1
Length = 355

Score = 45.4 bits (106), Expect = 0.001
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = -3

Query: 274 LWTSKDRLQEARLQAFAKIEGRIMQAAKDGDVNNVRQLLKQVEDDHKEKKP-XXXXXXXX 98
+W++ D RL K++ R+ QAAKD D++ +R LL +VE +E+K
Sbjct: 274 IWSAIDNSHARRLAKLDKVQNRLFQAAKDSDMDEIRGLLNEVELAGQERKGFSQRVILSF 333

Query: 97 XXXXXXXSLAIALLAFVWTADG 32
+L+ LLAF T+DG
Sbjct: 334 SSAMIVFTLSCVLLAFTLTSDG 355


>tr|B6TX64|B6TX64_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 442

Score = 45.4 bits (106), Expect = 0.001
Identities = 24/82 (29%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Frame = -3

Query: 274 LWTSKDRLQEARLQAFAKIEGRIMQAAKDGDVNNVRQLLKQVEDDHKEKKP-XXXXXXXX 98
+W+++D + RL +++ R++ AAKD D++ +R LLK+VE +E++
Sbjct: 361 IWSARDLARARRLAKLEEVQSRLVHAAKDSDIDEIRGLLKEVELSGQERQGFSQRAILAF 420

Query: 97 XXXXXXXSLAIALLAFVWTADG 32
+L+ L+AF T+DG
Sbjct: 421 AAGTIIFTLSCVLIAFTATSDG 442


>tr|A3A7T0|A3A7T0_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_006852 PE=4 SV=1
Length = 259

Score = 45.4 bits (106), Expect = 0.001
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = -3

Query: 274 LWTSKDRLQEARLQAFAKIEGRIMQAAKDGDVNNVRQLLKQVEDDHKEKKP-XXXXXXXX 98
+W++ D RL K++ R+ QAAKD D++ +R LL +VE +E+K
Sbjct: 178 IWSAIDNSHARRLAKLDKVQNRLFQAAKDSDMDEIRGLLNEVELAGQERKGFSQRVILSF 237

Query: 97 XXXXXXXSLAIALLAFVWTADG 32
+L+ LLAF T+DG
Sbjct: 238 SSAMIVFTLSCVLLAFTLTSDG 259


>tr|B8ATR5|B8ATR5_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_15905 PE=4 SV=1
Length = 474

Score = 43.9 bits (102), Expect = 0.004
Identities = 19/50 (38%), Positives = 34/50 (68%)
Frame = -3

Query: 274 LWTSKDRLQEARLQAFAKIEGRIMQAAKDGDVNNVRQLLKQVEDDHKEKK 125
+W+++D + RL +++ R++ AAKD DV+ +R LLK+VE +EK+
Sbjct: 393 IWSARDASRARRLAKLDEVQNRLIHAAKDSDVDEIRGLLKEVELAGQEKQ 442


>tr|Q7X8A2|Q7X8A2_ORYSA OSJNBa0035I04.2 protein (OSIGBa0076I14.6
protein) OS=Oryza sativa GN=OSJNBa0035I04.2 PE=4 SV=1
Length = 449

Score = 43.1 bits (100), Expect = 0.007
Identities = 19/50 (38%), Positives = 33/50 (66%)
Frame = -3

Query: 274 LWTSKDRLQEARLQAFAKIEGRIMQAAKDGDVNNVRQLLKQVEDDHKEKK 125
+W+++D + RL ++ R++ AAKD DV+ +R LLK+VE +EK+
Sbjct: 368 IWSARDASRARRLAKLDEVHNRLIHAAKDSDVDEIRGLLKEVELAGQEKQ 417


>tr|Q7F937|Q7F937_ORYSJ Os04g0423700 protein OS=Oryza sativa subsp.
japonica GN=OSJNBb0088C09.12 PE=4 SV=1
Length = 449

Score = 43.1 bits (100), Expect = 0.007
Identities = 19/50 (38%), Positives = 33/50 (66%)
Frame = -3

Query: 274 LWTSKDRLQEARLQAFAKIEGRIMQAAKDGDVNNVRQLLKQVEDDHKEKK 125
+W+++D + RL ++ R++ AAKD DV+ +R LLK+VE +EK+
Sbjct: 368 IWSARDASRARRLAKLDEVHNRLIHAAKDSDVDEIRGLLKEVELAGQEKQ 417