BP917424 |
Clone id |
YMU001_000100_F05 |
Library |
YMU01 |
Length |
596 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000100_F05. |
Accession |
BP917424 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
GGAGAAAGCACAACAGGCTTTTCCAAAGCAGCAGGTGTTCCTTCCCTCTCAGCAAGAACC TCTCCACCTTTGGTGAGGCCAGCCCCCCCGCATCTTCAGCCTTGGTGTCGCCCCCATTTG CTGGCATTGCCTAGCACTTCCCTCTTGGAGACATCGCCAGGAACCTCAGCACAGCCAGCG TATACTTCCCCAATCACTAACACCAGCAACCACAGCAAACTCAGCGTTTCCAGACTCAGC CTATCCAGCGTTTTGCTCTCCCCTTGGCAGCAGTAAACCTGAAATTACTAACGCTAGCAA GCAAGGCAAGACTGCAGCAAATCAGCACCATAGACGCAAGAGGATTTGACCACAGCAGCA GCGTTTTTCATCCCTGATCGCAGCAGAAGATCCACATGCCATAAGGCTGAATCGGGCCTT GCAAAACAGTCAATATTCAGCAATTAAAGCCCTGCTGTAAACAGCGTTTTTCAGCCAGCC TTATCCCCCCAAAAACGCAGCCAAAAAGGACCCGGAACCTTGTGTTTGTCCAGCCCTCAG ATTCAGNCATAAGCCCCAAGGAACCGTCCGTTTTCAGCAACGAAAACAGTCCCCTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q13029 |
Definition |
sp|Q13029|PRDM2_HUMAN PR domain zinc finger protein 2 OS=Homo sapiens |
Align length |
68 |
Score (bit) |
37.0 |
E-value |
0.075 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B7G3S6 |
Definition |
tr|B7G3S6|B7G3S6_PHATR Predicted protein OS=Phaeodactylum tricornutum CCAP 1055/1 |
Align length |
147 |
Score (bit) |
42.4 |
E-value |
0.02 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917424|Adiantum capillus-veneris mRNA, clone: YMU001_000100_F05. (596 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B7G3S6|B7G3S6_PHATR Predicted protein OS=Phaeodactylum tricor... 42 0.020 tr|Q2JT40|Q2JT40_SYNJA TonB family protein OS=Synechococcus sp. ... 37 0.66 tr|B4G8L0|B4G8L0_DROPE GL18814 OS=Drosophila persimilis GN=GL188... 37 0.86 tr|B3NLP6|B3NLP6_DROER GG21845 OS=Drosophila erecta GN=GG21845 P... 37 0.86 tr|Q5THJ1|Q5THJ1_HUMAN PR domain containing 2, with ZNF domain O... 37 0.86 tr|Q5THJ0|Q5THJ0_HUMAN PR domain containing 2, with ZNF domain (... 37 0.86 tr|Q59H82|Q59H82_HUMAN PR-domain zinc finger protein 2 variant (... 37 0.86 tr|B4DEP3|B4DEP3_HUMAN cDNA FLJ53305, highly similar to PR domai... 37 0.86 tr|A8MWY4|A8MWY4_HUMAN Putative uncharacterized protein PRDM2 OS... 37 0.86 tr|A8MW16|A8MW16_HUMAN Putative uncharacterized protein PRDM2 OS... 37 0.86 tr|B3NUH1|B3NUH1_DROER GG18291 OS=Drosophila erecta GN=GG18291 P... 36 1.5 tr|Q2J7J5|Q2J7J5_FRASC Putative uncharacterized protein OS=Frank... 36 1.9 tr|B8NBW5|B8NBW5_ASPFL CorA family metal ion transporter, putati... 36 1.9 tr|B6QDF9|B6QDF9_PENMA Putative uncharacterized protein OS=Penic... 36 1.9 tr|Q9U113|Q9U113_LEIMA Putative uncharacterized protein L4830.01... 35 2.5 tr|Q2TZD7|Q2TZD7_ASPOR Mg2+ and Co2+ transporters OS=Aspergillus... 35 2.5 tr|B2W076|B2W076_PYRTR Predicted protein OS=Pyrenophora tritici-... 27 2.6 tr|Q2LYR8|Q2LYR8_DROPS GA16820 OS=Drosophila pseudoobscura pseud... 35 3.3 tr|Q17J33|Q17J33_AEDAE Ubiquitin specific proteinase (Fragment) ... 35 3.3 tr|B5DI61|B5DI61_DROPS GA25811 OS=Drosophila pseudoobscura pseud... 35 3.3 tr|B4DU02|B4DU02_HUMAN cDNA FLJ54548, highly similar to PR domai... 35 3.3 tr|Q8NIV8|Q8NIV8_NEUCR Putative uncharacterized protein B13H18.0... 35 3.3 tr|B6HQC1|B6HQC1_PENCH Pc22g15830 protein OS=Penicillium chrysog... 35 3.3 tr|Q0IT24|Q0IT24_ORYSJ Os11g0425900 protein OS=Oryza sativa subs... 35 4.3 tr|A8XJW5|A8XJW5_CAEBR Putative uncharacterized protein OS=Caeno... 35 4.3 tr|B7D622|B7D622_9BURK Putative transmembrane protein OS=Diaphor... 34 5.6 tr|A2Q549|A2Q549_MEDTR Putative uncharacterized protein OS=Medic... 34 5.6 tr|B3KVL6|B3KVL6_HUMAN cDNA FLJ16715 fis, clone UTERU3000298, hi... 34 5.6 tr|B3KVD4|B3KVD4_HUMAN cDNA FLJ16429 fis, clone BRACE3008238, hi... 34 5.6 tr|A6SII9|A6SII9_BOTFB Predicted protein OS=Botryotinia fuckelia... 34 5.6
>tr|B7G3S6|B7G3S6_PHATR Predicted protein OS=Phaeodactylum tricornutum CCAP 1055/1 GN=E2F2 PE=4 SV=1 Length = 753
Score = 42.4 bits (98), Expect = 0.020 Identities = 36/147 (24%), Positives = 63/147 (42%), Gaps = 4/147 (2%) Frame = +2
Query: 23 PKQQVFLPSQQEPLHLW*GQPPRIFSLGVAPICWHCLALPSWRHRQEPQHSQRILPQSL- 199 P+Q+ P+Q P GQ P +G + H + P++ H+Q QR LP S+ Sbjct: 46 PQQRSSHPTQHSPQLYSYGQYPHAGQVGGSSQQPHVGSAPAYYHQQSHLAPQRQLPHSMY 105
Query: 200 TPATTANSAFPDS---AYPAFCSPLGSSKPEITNASKQGKTAANQHHRRKRI*PQQQRFS 370 P +++ PD Y + SP+GSS ++ + + R+ + P Sbjct: 106 NPRSSSRQVTPDERQYLYSGYRSPIGSSLQRTLHSPADSNRSPTKRPRQSKATP------ 159
Query: 371 SLIAAEDPHAIRLNRALQNSQYSAIKA 451 S IA+ P A L + S ++++ Sbjct: 160 STIASSSPGAYSLGSLYRPSPSGSLQS 186
>tr|Q2JT40|Q2JT40_SYNJA TonB family protein OS=Synechococcus sp. (strain JA-3-3Ab) GN=CYA_2030 PE=4 SV=1 Length = 439
Score = 37.4 bits (85), Expect = 0.66 Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 6/71 (8%) Frame = +1
Query: 4 ESTTGFSKAAGVPSLSARTSPPLVRPAPPHLQPWCRPHLLALPSTSL-LETSPGT----- 165 E+ + K AG PS A SPP P PP P R A+P + L L+T P T Sbjct: 159 EADSALPKPAGEPSDPAPESPPADNPPPPAPAPQERVETTAVPKSELALQTPPPTPTPVP 218
Query: 166 SAQPAYTSPIT 198 +A+P T P T Sbjct: 219 TAKPEPTPPPT 229
>tr|B4G8L0|B4G8L0_DROPE GL18814 OS=Drosophila persimilis GN=GL18814 PE=4 SV=1 Length = 239
Score = 37.0 bits (84), Expect = 0.86 Identities = 26/72 (36%), Positives = 33/72 (45%) Frame = +2
Query: 149 RHRQEPQHSQRILPQSLTPATTANSAFPDSAYPAFCSPLGSSKPEITNASKQGKTAANQH 328 RH Q R QS P A + P S YP C P SS P IT SK+G Q Sbjct: 101 RHPQSCGPKTRTRLQSQPPRNRAPHS-PLSEYPPQCPPPTSSAPNITRGSKRGYGMPQQQ 159
Query: 329 HRRKRI*PQQQR 364 ++++ QQQ+ Sbjct: 160 QQQQQQQKQQQQ 171
>tr|B3NLP6|B3NLP6_DROER GG21845 OS=Drosophila erecta GN=GG21845 PE=4 SV=1 Length = 1041
Score = 37.0 bits (84), Expect = 0.86 Identities = 32/105 (30%), Positives = 42/105 (40%) Frame = +2
Query: 11 QQAFPKQQVFLPSQQEPLHLW*GQPPRIFSLGVAPICWHCLALPSWRHRQEPQHSQRILP 190 Q P Q V P Q+P G PP +S LA P+ + Q + +ILP Sbjct: 9 QHDHPPQNVAHPFMQQPSAAGPGAPPATYSY---------LAQPAGQQPQWMTTTYQILP 59
Query: 191 QSLTPATTANSAFPDSAYPAFCSPLGSSKPEITNASKQGKTAANQ 325 S PAT A + + P P S +ITN+ Q T Q Sbjct: 60 PSTGPATVAKRYYATTG-PQTTHPTHPSTIQITNSFAQQATPPKQ 103
>tr|Q5THJ1|Q5THJ1_HUMAN PR domain containing 2, with ZNF domain OS=Homo sapiens GN=PRDM2 PE=2 SV=1 Length = 1481
Score = 37.0 bits (84), Expect = 0.86 Identities = 27/68 (39%), Positives = 35/68 (51%), Gaps = 6/68 (8%) Frame = +1
Query: 22 SKAAGVPSLSARTSPPLVRPAPPHLQPWCRPHL-LALPSTSLLET----SPGTSAQP-AY 183 S A PSLS+ PPL+ P P P C P L +A P LL T +P +SA P Sbjct: 747 SPALQTPSLSSGQLPPLLIPTDPSSPPPCPPVLTVATPPPPLLPTVPLPAPSSSASPHPC 806
Query: 184 TSPITNTS 207 SP++N + Sbjct: 807 PSPLSNAT 814
>tr|Q5THJ0|Q5THJ0_HUMAN PR domain containing 2, with ZNF domain (Fragment) OS=Homo sapiens GN=PRDM2 PE=2 SV=1 Length = 1540
Score = 37.0 bits (84), Expect = 0.86 Identities = 27/68 (39%), Positives = 35/68 (51%), Gaps = 6/68 (8%) Frame = +1
Query: 22 SKAAGVPSLSARTSPPLVRPAPPHLQPWCRPHL-LALPSTSLLET----SPGTSAQP-AY 183 S A PSLS+ PPL+ P P P C P L +A P LL T +P +SA P Sbjct: 806 SPALQTPSLSSGQLPPLLIPTDPSSPPPCPPVLTVATPPPPLLPTVPLPAPSSSASPHPC 865
Query: 184 TSPITNTS 207 SP++N + Sbjct: 866 PSPLSNAT 873
>tr|Q59H82|Q59H82_HUMAN PR-domain zinc finger protein 2 variant (Fragment) OS=Homo sapiens PE=2 SV=1 Length = 1576
Score = 37.0 bits (84), Expect = 0.86 Identities = 27/68 (39%), Positives = 35/68 (51%), Gaps = 6/68 (8%) Frame = +1
Query: 22 SKAAGVPSLSARTSPPLVRPAPPHLQPWCRPHL-LALPSTSLLET----SPGTSAQP-AY 183 S A PSLS+ PPL+ P P P C P L +A P LL T +P +SA P Sbjct: 806 SPALQTPSLSSGQLPPLLIPTDPSSPPPCPPVLTVATPPPPLLPTVPLPAPSSSASPHPC 865
Query: 184 TSPITNTS 207 SP++N + Sbjct: 866 PSPLSNAT 873
>tr|B4DEP3|B4DEP3_HUMAN cDNA FLJ53305, highly similar to PR domain zinc finger protein 2 (Fragment) OS=Homo sapiens PE=2 SV=1 Length = 1213
Score = 37.0 bits (84), Expect = 0.86 Identities = 27/68 (39%), Positives = 35/68 (51%), Gaps = 6/68 (8%) Frame = +1
Query: 22 SKAAGVPSLSARTSPPLVRPAPPHLQPWCRPHL-LALPSTSLLET----SPGTSAQP-AY 183 S A PSLS+ PPL+ P P P C P L +A P LL T +P +SA P Sbjct: 711 SAALQTPSLSSGQLPPLLIPTDPSSPPPCPPVLTVATPPPPLLPTVPLPAPSSSASPHPC 770
Query: 184 TSPITNTS 207 SP++N + Sbjct: 771 PSPLSNAT 778
>tr|A8MWY4|A8MWY4_HUMAN Putative uncharacterized protein PRDM2 OS=Homo sapiens GN=PRDM2 PE=4 SV=1 Length = 1481
Score = 37.0 bits (84), Expect = 0.86 Identities = 27/68 (39%), Positives = 35/68 (51%), Gaps = 6/68 (8%) Frame = +1
Query: 22 SKAAGVPSLSARTSPPLVRPAPPHLQPWCRPHL-LALPSTSLLET----SPGTSAQP-AY 183 S A PSLS+ PPL+ P P P C P L +A P LL T +P +SA P Sbjct: 747 SPALQTPSLSSGQLPPLLIPTDPSSPPPCPPVLTVATPPPPLLPTVPLPAPSSSASPHPC 806
Query: 184 TSPITNTS 207 SP++N + Sbjct: 807 PSPLSNAT 814
>tr|A8MW16|A8MW16_HUMAN Putative uncharacterized protein PRDM2 OS=Homo sapiens GN=PRDM2 PE=4 SV=1 Length = 1682
Score = 37.0 bits (84), Expect = 0.86 Identities = 27/68 (39%), Positives = 35/68 (51%), Gaps = 6/68 (8%) Frame = +1
Query: 22 SKAAGVPSLSARTSPPLVRPAPPHLQPWCRPHL-LALPSTSLLET----SPGTSAQP-AY 183 S A PSLS+ PPL+ P P P C P L +A P LL T +P +SA P Sbjct: 948 SPALQTPSLSSGQLPPLLIPTDPSSPPPCPPVLTVATPPPPLLPTVPLPAPSSSASPHPC 1007
Query: 184 TSPITNTS 207 SP++N + Sbjct: 1008 PSPLSNAT 1015
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