BP917431 |
Clone id |
YMU001_000100_G01 |
Library |
YMU01 |
Length |
523 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000100_G01. |
Accession |
BP917431 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1791Contig1 |
Sequence |
GTGTCTGCTCTAGCATCTCCTCGTTATAAGCTCTCGTTCTCATCCTGCCATTTCCAGCAC TATTCCATCCAGAATGTATCTGCATAGCTGGTGGCGGCGGCGGTGGCGGTGGCGGCGTCA GCATTCGAATACGGCGACCACTATGGTAATTCCCTGTTGCCACCATGGGTGCCCTTGGCG ACAATGTGAGCTCACCATTGTACCTCCCATCGCCATTATAGCTTTGATGATGGTAATTTT GATGAGAATTTGCATGATGCTCCATGCTCCCTGCCCCATTCTGTAGCTCCATCTGCATCC TTTGCTCAATCAGCGATGTGGAATCCATCGACACGGTATCGAAAGAGCCTCCTGGTGAGA GCTCTGTTGGTGGTGATGACAAGGCACTCAGCTGCTTCCCTAACGCATGAATAGTCCTTT GACATTCAGACAGCTTTTCTTTTGCAGCCACAAGTTCGCGCTCCTTTCCCAACCTCGTAT CCTCGTCATCTGGTACCTTACCATTACATTCATCCTCATAAAT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9C698 |
Definition |
sp|Q9C698|FPP6_ARATH Filament-like plant protein 6 OS=Arabidopsis thaliana |
Align length |
46 |
Score (bit) |
45.4 |
E-value |
0.0002 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q10P54 |
Definition |
tr|Q10P54|Q10P54_ORYSJ Os03g0246500 protein OS=Oryza sativa subsp. japonica |
Align length |
88 |
Score (bit) |
55.8 |
E-value |
1.0e-06 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917431|Adiantum capillus-veneris mRNA, clone: YMU001_000100_G01. (523 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q10P54|Q10P54_ORYSJ Os03g0246500 protein OS=Oryza sativa subs... 56 1e-06 tr|B8AK11|B8AK11_ORYSI Putative uncharacterized protein OS=Oryza... 56 1e-06 tr|A3AG19|A3AG19_ORYSJ Putative uncharacterized protein OS=Oryza... 56 1e-06 tr|Q8SAW5|Q8SAW5_ORYSJ Putative myosin-like protein OS=Oryza sat... 51 4e-05 tr|Q33AV6|Q33AV6_ORYSJ Expressed protein OS=Oryza sativa subsp. ... 51 4e-05 tr|Q0IYT8|Q0IYT8_ORYSJ Os10g0162400 protein (Fragment) OS=Oryza ... 51 4e-05 tr|A3C2S6|A3C2S6_ORYSJ Putative uncharacterized protein OS=Oryza... 51 4e-05 tr|A2Z5A2|A2Z5A2_ORYSI Putative uncharacterized protein OS=Oryza... 51 4e-05 tr|A7PLD8|A7PLD8_VITVI Chromosome chr7 scaffold_20, whole genome... 47 4e-04 tr|A5BFY8|A5BFY8_VITVI Putative uncharacterized protein OS=Vitis... 47 4e-04 tr|B4FZF2|B4FZF2_MAIZE Putative uncharacterized protein OS=Zea m... 46 0.001 tr|A9SYI9|A9SYI9_PHYPA Predicted protein OS=Physcomitrella paten... 45 0.002 tr|A7NSY0|A7NSY0_VITVI Chromosome chr18 scaffold_1, whole genome... 45 0.002 tr|A5ASD5|A5ASD5_VITVI Putative uncharacterized protein OS=Vitis... 44 0.004 tr|A7P9M4|A7P9M4_VITVI Chromosome chr3 scaffold_8, whole genome ... 42 0.014 tr|A5C0S3|A5C0S3_VITVI Putative uncharacterized protein OS=Vitis... 42 0.014 tr|Q7XT52|Q7XT52_ORYSJ Os04g0649200 protein OS=Oryza sativa subs... 42 0.024 tr|Q25AN2|Q25AN2_ORYSA H0212B02.1 protein OS=Oryza sativa GN=H02... 42 0.024 tr|B8AVK0|B8AVK0_ORYSI Putative uncharacterized protein OS=Oryza... 42 0.024 tr|A3AY25|A3AY25_ORYSJ Putative uncharacterized protein OS=Oryza... 42 0.024 tr|Q6K5X7|Q6K5X7_ORYSJ Os02g0614600 protein OS=Oryza sativa subs... 41 0.041 tr|A7PKQ3|A7PKQ3_VITVI Chromosome chr7 scaffold_20, whole genome... 41 0.041 tr|A5BXJ6|A5BXJ6_VITVI Putative uncharacterized protein OS=Vitis... 41 0.041 tr|A3A918|A3A918_ORYSJ Putative uncharacterized protein OS=Oryza... 41 0.041 tr|A2X771|A2X771_ORYSI Putative uncharacterized protein OS=Oryza... 41 0.041 tr|A7NVD8|A7NVD8_VITVI Chromosome chr18 scaffold_1, whole genome... 39 0.16 tr|Q4S059|Q4S059_TETNG Chromosome undetermined SCAF14784, whole ... 39 0.21 tr|A7QDZ8|A7QDZ8_VITVI Chromosome chr4 scaffold_83, whole genome... 39 0.21 tr|B6U7T9|B6U7T9_MAIZE Putative uncharacterized protein OS=Zea m... 38 0.27 tr|Q29HJ0|Q29HJ0_DROPS GA10837 OS=Drosophila pseudoobscura pseud... 38 0.27
>tr|Q10P54|Q10P54_ORYSJ Os03g0246500 protein OS=Oryza sativa subsp. japonica GN=Os03g0246500 PE=4 SV=1 Length = 1040
Score = 55.8 bits (133), Expect = 1e-06 Identities = 38/88 (43%), Positives = 52/88 (59%), Gaps = 1/88 (1%) Frame = -1
Query: 520 YEDECNGK-VPDDEDTRLGKERELVAAKEKLSECQRTIHALGKQLSALSSPPTELSPGGS 344 YE+E N V +D DT+ +E+E+ AA EKL+ECQ TI LG+QL ++ PP E Sbjct: 882 YENERNSMCVDEDADTKAKQEKEIAAAAEKLAECQETILILGRQLQSM-RPPAE------ 934
Query: 343 FDTVSMDSTSLIEQRMQMELQNGAGSME 260 SM S+ QRM+ LQ+ AG+ E Sbjct: 935 ----SMGSSP--NQRMEDFLQDAAGTTE 956
>tr|B8AK11|B8AK11_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_10736 PE=4 SV=1 Length = 1076
Score = 55.8 bits (133), Expect = 1e-06 Identities = 38/88 (43%), Positives = 52/88 (59%), Gaps = 1/88 (1%) Frame = -1
Query: 520 YEDECNGK-VPDDEDTRLGKERELVAAKEKLSECQRTIHALGKQLSALSSPPTELSPGGS 344 YE+E N V +D DT+ +E+E+ AA EKL+ECQ TI LG+QL ++ PP E Sbjct: 918 YENERNSMCVDEDADTKAKQEKEIAAAAEKLAECQETILILGRQLQSM-RPPAE------ 970
Query: 343 FDTVSMDSTSLIEQRMQMELQNGAGSME 260 SM S+ QRM+ LQ+ AG+ E Sbjct: 971 ----SMGSSP--NQRMEDFLQDAAGTTE 992
>tr|A3AG19|A3AG19_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_009741 PE=4 SV=1 Length = 1059
Score = 55.8 bits (133), Expect = 1e-06 Identities = 38/88 (43%), Positives = 52/88 (59%), Gaps = 1/88 (1%) Frame = -1
Query: 520 YEDECNGK-VPDDEDTRLGKERELVAAKEKLSECQRTIHALGKQLSALSSPPTELSPGGS 344 YE+E N V +D DT+ +E+E+ AA EKL+ECQ TI LG+QL ++ PP E Sbjct: 901 YENERNSMCVDEDADTKAKQEKEIAAAAEKLAECQETILILGRQLQSM-RPPAE------ 953
Query: 343 FDTVSMDSTSLIEQRMQMELQNGAGSME 260 SM S+ QRM+ LQ+ AG+ E Sbjct: 954 ----SMGSSP--NQRMEDFLQDAAGTTE 975
>tr|Q8SAW5|Q8SAW5_ORYSJ Putative myosin-like protein OS=Oryza sativa subsp. japonica GN=OSJNBb0042K08.8 PE=4 SV=1 Length = 1187
Score = 50.8 bits (120), Expect = 4e-05 Identities = 25/54 (46%), Positives = 35/54 (64%), Gaps = 1/54 (1%) Frame = -1
Query: 520 YEDECN-GKVPDDEDTRLGKERELVAAKEKLSECQRTIHALGKQLSALSSPPTE 362 YE+E N V +D ++ +++E+ AA EKL+ECQ TI LG+QL L PP E Sbjct: 857 YENEKNTSSVDEDAGVKIKQDKEIAAAAEKLAECQETILLLGRQLQTLRPPPAE 910
>tr|Q33AV6|Q33AV6_ORYSJ Expressed protein OS=Oryza sativa subsp. japonica GN=LOC_Os10g07480 PE=4 SV=1 Length = 910
Score = 50.8 bits (120), Expect = 4e-05 Identities = 25/54 (46%), Positives = 35/54 (64%), Gaps = 1/54 (1%) Frame = -1
Query: 520 YEDECN-GKVPDDEDTRLGKERELVAAKEKLSECQRTIHALGKQLSALSSPPTE 362 YE+E N V +D ++ +++E+ AA EKL+ECQ TI LG+QL L PP E Sbjct: 743 YENEKNTSSVDEDAGVKIKQDKEIAAAAEKLAECQETILLLGRQLQTLRPPPAE 796
>tr|Q0IYT8|Q0IYT8_ORYSJ Os10g0162400 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os10g0162400 PE=4 SV=1 Length = 904
Score = 50.8 bits (120), Expect = 4e-05 Identities = 25/54 (46%), Positives = 35/54 (64%), Gaps = 1/54 (1%) Frame = -1
Query: 520 YEDECN-GKVPDDEDTRLGKERELVAAKEKLSECQRTIHALGKQLSALSSPPTE 362 YE+E N V +D ++ +++E+ AA EKL+ECQ TI LG+QL L PP E Sbjct: 737 YENEKNTSSVDEDAGVKIKQDKEIAAAAEKLAECQETILLLGRQLQTLRPPPAE 790
>tr|A3C2S6|A3C2S6_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_029598 PE=4 SV=1 Length = 1024
Score = 50.8 bits (120), Expect = 4e-05 Identities = 25/54 (46%), Positives = 35/54 (64%), Gaps = 1/54 (1%) Frame = -1
Query: 520 YEDECN-GKVPDDEDTRLGKERELVAAKEKLSECQRTIHALGKQLSALSSPPTE 362 YE+E N V +D ++ +++E+ AA EKL+ECQ TI LG+QL L PP E Sbjct: 857 YENEKNTSSVDEDAGVKIKQDKEIAAAAEKLAECQETILLLGRQLQTLRPPPAE 910
>tr|A2Z5A2|A2Z5A2_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_32826 PE=4 SV=1 Length = 1024
Score = 50.8 bits (120), Expect = 4e-05 Identities = 25/54 (46%), Positives = 35/54 (64%), Gaps = 1/54 (1%) Frame = -1
Query: 520 YEDECN-GKVPDDEDTRLGKERELVAAKEKLSECQRTIHALGKQLSALSSPPTE 362 YE+E N V +D ++ +++E+ AA EKL+ECQ TI LG+QL L PP E Sbjct: 857 YENEKNTSSVDEDAGVKMKQDKEIAAAAEKLAECQETILLLGRQLQTLRPPPAE 910
>tr|A7PLD8|A7PLD8_VITVI Chromosome chr7 scaffold_20, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00019531001 PE=4 SV=1 Length = 253
Score = 47.4 bits (111), Expect = 4e-04 Identities = 23/40 (57%), Positives = 29/40 (72%) Frame = -1
Query: 490 DDEDTRLGKERELVAAKEKLSECQRTIHALGKQLSALSSP 371 D E+ +L + E+ AA EKL+ECQ TI LGKQL AL+SP Sbjct: 65 DQEENQLRTDWEITAASEKLAECQETILNLGKQLKALASP 104
>tr|A5BFY8|A5BFY8_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_042269 PE=4 SV=1 Length = 1124
Score = 47.4 bits (111), Expect = 4e-04 Identities = 23/40 (57%), Positives = 29/40 (72%) Frame = -1
Query: 490 DDEDTRLGKERELVAAKEKLSECQRTIHALGKQLSALSSP 371 D E+ +L + E+ AA EKL+ECQ TI LGKQL AL+SP Sbjct: 936 DQEENQLRTDWEITAASEKLAECQETILNLGKQLKALASP 975
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