BP917435 |
Clone id |
YMU001_000100_G08 |
Library |
YMU01 |
Length |
519 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000100_G08. |
Accession |
BP917435 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL3015Contig1 |
Sequence |
CACGATGGATGTCGGGCGCTCTGTTTTGGCTCAAACAGAACCAAGGACCAGGCTAGATGC AGGGACATGGGGTACAATGGGCGTAGGTTTAGGTTATGCTATCGCAGCGGCAAGTGTTTG TCCTGAGACATTGGTTGTGGCAGTCGAAGGAGACTCTGCATTGGGTTTTAGTGGCCTTGA AGTCGAGACTATTGTACGATATGGCTTTCCTATCATCGTGATTGTTTTCAACAATGGTGG TGTATATGGGGGAGACCGGAGAAATCCCGAGGATATTGAAGGGCCGCACAAGGCAGATCC TGCCCCGACATCCTTTGTTCCGGATGCTAAGTATCATGCTTTAATGGAAGCATTTGGAGG GAAGGGCTATTGTGCCACAACACCTCAAGAACTGCAGGATGCTGTTAAAGAATCATTCGC TGCAAGAAAGCCAGCTCTTATCAATGTTATTCTTGATCCCTTTGCAGGTTCAGAAAGTGG GAGAATGCATCACAGAAATTGATATGGGGGGACTGTTAC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P0AFI0 |
Definition |
sp|P0AFI0|OXC_ECOLI Probable oxalyl-CoA decarboxylase OS=Escherichia coli (strain K12) |
Align length |
166 |
Score (bit) |
164.0 |
E-value |
3.0e-40 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917435|Adiantum capillus-veneris mRNA, clone: YMU001_000100_G08. (519 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P0AFI0|OXC_ECOLI Probable oxalyl-CoA decarboxylase OS=Escheri... 164 3e-40 sp|P0AFI1|OXC_ECO57 Probable oxalyl-CoA decarboxylase OS=Escheri... 164 3e-40 sp|P40149|OXC_OXAFO Oxalyl-CoA decarboxylase OS=Oxalobacter form... 160 3e-39 sp|Q9UJ83|HACL1_HUMAN 2-hydroxyacyl-CoA lyase 1 OS=Homo sapiens ... 150 3e-36 sp|Q8CHM7|HACL1_RAT 2-hydroxyacyl-CoA lyase 1 OS=Rattus norvegic... 149 6e-36 sp|Q9QXE0|HACL1_MOUSE 2-hydroxyacyl-CoA lyase 1 OS=Mus musculus ... 144 2e-34 sp|Q54DA9|HACL1_DICDI Probable 2-hydroxyacyl-CoA lyase 1 OS=Dict... 130 4e-30 sp|Q9Y7M1|YGK4_SCHPO Putative 2-hydroxyacyl-CoA lyase OS=Schizos... 122 8e-28 sp|P39994|YEC0_YEAST Putative 2-hydroxyacyl-CoA lyase OS=Sacchar... 115 1e-25 sp|P66946|ILVG_MYCTU Probable acetolactate synthase OS=Mycobacte... 96 1e-19 sp|P66947|ILVG_MYCBO Probable acetolactate synthase OS=Mycobacte... 96 1e-19 sp|P51853|BZNB_PSEFL Benzaldehyde lyase OS=Pseudomonas fluoresce... 70 8e-12 sp|Q93PS3|XSC_DESTI Sulfoacetaldehyde acetyltransferase OS=Desul... 69 1e-11 sp|Q57725|ILVB_METJA Probable acetolactate synthase large subuni... 65 1e-10 sp|Q04789|ILVX_BACSU Acetolactate synthase OS=Bacillus subtilis ... 65 2e-10 sp|O08353|ILVB_METAO Probable acetolactate synthase large subuni... 65 2e-10 sp|P45261|ILVI_HAEIN Acetolactate synthase large subunit OS=Haem... 64 3e-10 sp|Q6NV04|ILVBL_DANRE Acetolactate synthase-like protein OS=Dani... 64 3e-10 sp|P69684|ILVB_PORUM Acetolactate synthase large subunit OS=Porp... 60 6e-09 sp|P69683|ILVB_PORPU Acetolactate synthase large subunit OS=Porp... 60 6e-09 sp|Q1XDF6|ILVB_PORYE Acetolactate synthase large subunit OS=Porp... 60 8e-09 sp|Q6SSJ3|ILVB_CRYNV Acetolactate synthase, mitochondrial OS=Cry... 59 1e-08 sp|Q8BU33|ILVBL_MOUSE Acetolactate synthase-like protein OS=Mus ... 59 1e-08 sp|P20906|MDLC_PSEPU Benzoylformate decarboxylase OS=Pseudomonas... 59 2e-08 sp|P00893|ILVI_ECOLI Acetolactate synthase isozyme 3 large subun... 59 2e-08 sp|P07342|ILVB_YEAST Acetolactate synthase catalytic subunit, mi... 59 2e-08 sp|Q5KPJ5|ILVB_CRYNE Acetolactate synthase, mitochondrial OS=Cry... 58 2e-08 sp|P40811|ILVI_SALTY Acetolactate synthase isozyme 3 large subun... 58 3e-08 sp|P36620|ILVB_SCHPO Acetolactate synthase, mitochondrial OS=Sch... 58 3e-08 sp|A1L0T0|ILVBL_HUMAN Acetolactate synthase-like protein OS=Homo... 57 5e-08
>sp|P0AFI0|OXC_ECOLI Probable oxalyl-CoA decarboxylase OS=Escherichia coli (strain K12) GN=oxc PE=1 SV=1 Length = 564
Score = 164 bits (414), Expect = 3e-40 Identities = 82/166 (49%), Positives = 111/166 (66%) Frame = +2
Query: 2 TMDVGRSVLAQTEPRTRLDAGTWGTMGVGLGYAIAAASVCPETLVVAVEGDSALGFSGLE 181 T+D R+++ +PR RLD GTWG MG+G+GYAI A SV + VVA+EGDSA GFSG+E Sbjct: 398 TLDNARNIIDMYKPRRRLDCGTWGVMGIGMGYAIGA-SVTSGSPVVAIEGDSAFGFSGME 456
Query: 182 VETIVRYGFPIIVIVFNNGGVYGGDRRNPEDIEGPHKADPAPTSFVPDAKYHALMEAFGG 361 +ETI RY P+ +++FNNGG+Y GD D+ G P+PT + A+Y LM+AF G Sbjct: 457 IETICRYNLPVTIVIFNNGGIYRGD---GVDLSG--AGAPSPTDLLHHARYDKLMDAFRG 511
Query: 362 KGYCATTPQELQDAVKESFAARKPALINVILDPFAGSESGRMHHRN 499 GY TT EL+ A+ +RKP +INV++DP AG+ESG + N Sbjct: 512 VGYNVTTTDELRHALTTGIQSRKPTIINVVIDPAAGTESGHITKLN 557
>sp|P0AFI1|OXC_ECO57 Probable oxalyl-CoA decarboxylase OS=Escherichia coli O157:H7 GN=oxc PE=3 SV=1 Length = 564
Score = 164 bits (414), Expect = 3e-40 Identities = 82/166 (49%), Positives = 111/166 (66%) Frame = +2
Query: 2 TMDVGRSVLAQTEPRTRLDAGTWGTMGVGLGYAIAAASVCPETLVVAVEGDSALGFSGLE 181 T+D R+++ +PR RLD GTWG MG+G+GYAI A SV + VVA+EGDSA GFSG+E Sbjct: 398 TLDNARNIIDMYKPRRRLDCGTWGVMGIGMGYAIGA-SVTSGSPVVAIEGDSAFGFSGME 456
Query: 182 VETIVRYGFPIIVIVFNNGGVYGGDRRNPEDIEGPHKADPAPTSFVPDAKYHALMEAFGG 361 +ETI RY P+ +++FNNGG+Y GD D+ G P+PT + A+Y LM+AF G Sbjct: 457 IETICRYNLPVTIVIFNNGGIYRGD---GVDLSG--AGAPSPTDLLHHARYDKLMDAFRG 511
Query: 362 KGYCATTPQELQDAVKESFAARKPALINVILDPFAGSESGRMHHRN 499 GY TT EL+ A+ +RKP +INV++DP AG+ESG + N Sbjct: 512 VGYNVTTTDELRHALTTGIQSRKPTIINVVIDPAAGTESGHITKLN 557
>sp|P40149|OXC_OXAFO Oxalyl-CoA decarboxylase OS=Oxalobacter formigenes GN=oxc PE=1 SV=1 Length = 568
Score = 160 bits (405), Expect = 3e-39 Identities = 83/169 (49%), Positives = 113/169 (66%), Gaps = 4/169 (2%) Frame = +2
Query: 5 MDVGRSVLAQTEPRTRLDAGTWGTMGVGLGYAIAAASVCPETLVVAVEGDSALGFSGLEV 184 +D R ++ +PR RLD+GTWG MG+G+GY +AAA+V + V+AVEGDSA GFSG+E+ Sbjct: 404 LDNTRMIVDMLKPRKRLDSGTWGVMGIGMGYCVAAAAVTGKP-VIAVEGDSAFGFSGMEL 462
Query: 185 ETIVRYGFPIIVIVFNNGGVYGGDRRNPEDIEGPHKADPAP----TSFVPDAKYHALMEA 352 ETI RY P+ VI+ NNGG+Y G+ +ADP P + + +Y +MEA Sbjct: 463 ETICRYNLPVTVIIMNNGGIYKGN-----------EADPQPGVISCTRLTRGRYDMMMEA 511
Query: 353 FGGKGYCATTPQELQDAVKESFAARKPALINVILDPFAGSESGRMHHRN 499 FGGKGY A TP EL+ A++E+ A+ KP LIN ++DP AG ESGR+ N Sbjct: 512 FGGKGYVANTPAELKAALEEAVASGKPCLINAMIDPDAGVESGRIKSLN 560
>sp|Q9UJ83|HACL1_HUMAN 2-hydroxyacyl-CoA lyase 1 OS=Homo sapiens GN=HACL1 PE=1 SV=2 Length = 578
Score = 150 bits (380), Expect = 3e-36 Identities = 84/171 (49%), Positives = 113/171 (66%), Gaps = 8/171 (4%) Frame = +2
Query: 2 TMDVGRSVLAQTEPRTRLDAGTWGTMGVGLGYAIAAASVC----PETLVVAVEGDSALGF 169 TMD+GR+VL PR RLDAGT+GTMGVGLG+AIAAA V P ++ VEGDSA GF Sbjct: 401 TMDIGRTVLQNYLPRHRLDAGTFGTMGVGLGFAIAAAVVAKDRSPGQWIICVEGDSAFGF 460
Query: 170 SGLEVETIVRYGFPIIVIVFNNGGVYGG-DRRNPEDIEGPHKADPA--PTSFVPDAKYHA 340 SG+EVETI RY PII++V NN G+Y G D +++ A P +P++ Y Sbjct: 461 SGMEVETICRYNLPIILLVVNNNGIYQGFDTDTWKEMLKFQDATAVVPPMCLLPNSHYEQ 520
Query: 341 LMEAFGGKGYCATTPQELQDAVKESFA-ARKPALINVILDPFAGSESGRMH 490 +M AFGGKGY TP+ELQ ++++S A KP+LIN++++P A ++ H Sbjct: 521 VMTAFGGKGYFVQTPEELQKSLRQSLADTTKPSLINIMIEPQATRKAQDFH 571
>sp|Q8CHM7|HACL1_RAT 2-hydroxyacyl-CoA lyase 1 OS=Rattus norvegicus GN=Hacl1 PE=1 SV=1 Length = 581
Score = 149 bits (377), Expect = 6e-36 Identities = 82/172 (47%), Positives = 112/172 (65%), Gaps = 9/172 (5%) Frame = +2
Query: 2 TMDVGRSVLAQTEPRTRLDAGTWGTMGVGLGYAIAAASVC----PETLVVAVEGDSALGF 169 TMD+GR+VL PR RLDAG++GTMGVGLG+AIAAA V P V+ VEGDSA GF Sbjct: 404 TMDIGRTVLQNYLPRHRLDAGSFGTMGVGLGFAIAAAVVAKERSPGQRVICVEGDSAFGF 463
Query: 170 SGLEVETIVRYGFPIIVIVFNNGGVYGGDRRNP----EDIEGPHKADPAPTSFVPDAKYH 337 SG+EVETI RY PII++V NN G+Y G + + +G P P +P++ Y Sbjct: 464 SGMEVETICRYNLPIIILVVNNNGIYQGFDADTWGKILNFQGTATTIP-PMCLLPNSHYE 522
Query: 338 ALMEAFGGKGYCATTPQELQDAVKESFA-ARKPALINVILDPFAGSESGRMH 490 +M AFGGKGY TP+ELQD+++++ KP LIN++++P + ++ H Sbjct: 523 QVMTAFGGKGYFVQTPEELQDSLRQALKDTSKPCLINIMIEPQSTRKAQDFH 574
>sp|Q9QXE0|HACL1_MOUSE 2-hydroxyacyl-CoA lyase 1 OS=Mus musculus GN=Hacl1 PE=1 SV=2 Length = 581
Score = 144 bits (363), Expect = 2e-34 Identities = 80/171 (46%), Positives = 111/171 (64%), Gaps = 8/171 (4%) Frame = +2
Query: 2 TMDVGRSVLAQTEPRTRLDAGTWGTMGVGLGYAIAAASVC----PETLVVAVEGDSALGF 169 TMD+GR++L PR RLDAG++GTMGVGLG+AIAAA V P V+ VEGDSA GF Sbjct: 404 TMDIGRTMLQNCLPRHRLDAGSFGTMGVGLGFAIAAALVAKDRSPGQRVICVEGDSAFGF 463
Query: 170 SGLEVETIVRYGFPIIVIVFNNGGVYGG-DRRNPEDIEGPHKADPA--PTSFVPDAKYHA 340 SG+EVETI RY PII++V NN G+Y G D E + +A P +P++ Y Sbjct: 464 SGMEVETICRYNLPIILLVVNNNGIYQGFDADTWEKMLHFQEAATTVPPMCLLPNSHYEQ 523
Query: 341 LMEAFGGKGYCATTPQELQDAVKESFA-ARKPALINVILDPFAGSESGRMH 490 +M AFGGKGY TP+ELQ +++++ KP L+N++++P + ++ H Sbjct: 524 VMTAFGGKGYFVRTPEELQHSLRQALQDTSKPCLLNIMIEPQSTRKAQDFH 574
>sp|Q54DA9|HACL1_DICDI Probable 2-hydroxyacyl-CoA lyase 1 OS=Dictyostelium discoideum GN=hacl1 PE=3 SV=1 Length = 580
Score = 130 bits (327), Expect = 4e-30 Identities = 73/160 (45%), Positives = 94/160 (58%), Gaps = 7/160 (4%) Frame = +2
Query: 2 TMDVGRSVLAQTEPRTRLDAGTWGTMGVGLGYAIAAASVCPETLVVAVEGDSALGFSGLE 181 TMD+GR + QT PR+RLDAGT TMGVG+GY++AA P+ VV ++GDSA GFS +E Sbjct: 413 TMDIGRLCIPQTLPRSRLDAGTLATMGVGVGYSVAAQICFPDRSVVCIQGDSAFGFSAME 472
Query: 182 VETIVRYGFPIIVIVFNNGGVYGG-----DRRNPEDIEGPHKADPAPTSFVPDAKYHALM 346 +E VRY PI+ IV NN GVY G D + E P PTS D KY +M Sbjct: 473 MEVAVRYKLPIVFIVLNNNGVYEGLESMSDPKYTSSTESASLHIP-PTSLSVDTKYELIM 531
Query: 347 EAFGGKGYCATTPQELQDAVKE--SFAARKPALINVILDP 460 ++FGG GY +T L D K+ S P L+N+ + P Sbjct: 532 QSFGGTGYSISTISNLLDICKQIKSKQISLPTLLNIKIKP 571
>sp|Q9Y7M1|YGK4_SCHPO Putative 2-hydroxyacyl-CoA lyase OS=Schizosaccharomyces pombe GN=SPBC725.04 PE=2 SV=1 Length = 568
Score = 122 bits (307), Expect = 8e-28 Identities = 68/156 (43%), Positives = 95/156 (60%), Gaps = 1/156 (0%) Frame = +2
Query: 2 TMDVGRSVLAQTEPRTRLDAGTWGTMGVGLGYAIAAASVCPETLVVAVEGDSALGFSGLE 181 TMD GR +L T PR RLDAGT TMGVG+GYAIA+A +V VEGDSA GFS +E Sbjct: 397 TMDRGRQLLEVTHPRGRLDAGTMSTMGVGMGYAIASAFAHSSDKIVVVEGDSAFGFSAME 456
Query: 182 VETIVRYGFPIIVIVFNNGGVYGG-DRRNPEDIEGPHKADPAPTSFVPDAKYHALMEAFG 358 +ET +R ++VIV NN GVY G D E + H+ T+ +Y + EA G Sbjct: 457 LETAIRNQLDLLVIVINNNGVYHGLDTDAYETLRDNHQL--PTTALGTSIRYDQICEACG 514
Query: 359 GKGYCATTPQELQDAVKESFAARKPALINVILDPFA 466 GKG+ ++L+ ++++++ +LINV++DP A Sbjct: 515 GKGFFVKNEEDLRSSLRKAWQTSSVSLINVMVDPEA 550
>sp|P39994|YEC0_YEAST Putative 2-hydroxyacyl-CoA lyase OS=Saccharomyces cerevisiae GN=YEL020C PE=1 SV=1 Length = 560
Score = 115 bits (288), Expect = 1e-25 Identities = 65/157 (41%), Positives = 92/157 (58%), Gaps = 4/157 (2%) Frame = +2
Query: 2 TMDVGRSVLAQTEPRTRLDAGTWGTMGVGLGYAIAAASVCPETLVVAVEGDSALGFSGLE 181 TMD+ R PR RLDAGT TMG+GLGYA+A + PE VV ++GDSA GFS +E Sbjct: 396 TMDIARISFPTDAPRRRLDAGTNATMGIGLGYALACKASHPELDVVLIQGDSAFGFSAME 455
Query: 182 VETIVRYGFPIIVIVFNNGGVYGGDRRNPEDIEGPHKADPAPTSFVPDAKYHALMEAFGG 361 +ET VR ++++V NN G+Y G++ DIEG D PT+ + +Y + + G Sbjct: 456 IETAVRCQLALVIVVMNNSGIYHGEK----DIEG----DLPPTALSKNCRYDLVGKGLGA 507
Query: 362 KGYCATTPQEL----QDAVKESFAARKPALINVILDP 460 + T EL Q AV+ S R+ ++INVI++P Sbjct: 508 NDFFVNTISELSRCFQQAVQLSRTKRETSVINVIIEP 544
>sp|P66946|ILVG_MYCTU Probable acetolactate synthase OS=Mycobacterium tuberculosis GN=ilvG PE=3 SV=1 Length = 547
Score = 95.5 bits (236), Expect = 1e-19 Identities = 50/140 (35%), Positives = 82/140 (58%) Frame = +2
Query: 41 PRTRLDAGTWGTMGVGLGYAIAAASVCPETLVVAVEGDSALGFSGLEVETIVRYGFPIIV 220 P LD+G +G +G G GYA+AA P+ VV ++GD A GFSG+E +T+VR+ ++ Sbjct: 402 PGCWLDSGPFGCLGSGPGYALAAKLARPQRQVVLLQGDGAFGFSGMEWDTLVRHNVAVVS 461
Query: 221 IVFNNGGVYGGDRRNPEDIEGPHKADPAPTSFVPDAKYHALMEAFGGKGYCATTPQELQD 400 ++ NN G++G ++ E + G P +Y ++ A GG G + P EL+ Sbjct: 462 VIGNN-GIWGLEKHPMEALYG----YSVVAELRPGTRYDEVVRALGGHGELVSVPAELRP 516
Query: 401 AVKESFAARKPALINVILDP 460 A++ +FA+ PA++NV+ DP Sbjct: 517 ALERAFASGLPAVVNVLTDP 536
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TV75 |
Definition |
tr|A9TV75|A9TV75_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
166 |
Score (bit) |
270.0 |
E-value |
4.0e-71 |
Report |
|