| BP917440 |
| Clone id |
YMU001_000100_H03 |
| Library |
YMU01 |
| Length |
436 |
| Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000100_H03. |
| Accession |
BP917440 |
| Tissue type |
prothallium |
| Developmental stage |
- |
| Contig ID |
- |
| Sequence |
CGGTGAGCTGAAACAGGGGGAGATGTGTGCTGATGATCAAGAAATCAGCATACACACTAA
AGGATGCACAAAAAAGCAACTAAAGCGTCTCATCCGCAGCGCGGCAGCGCTTGATAATGC
AGTGAGTAGCCAACGGGCTCAAAAAACTCGAAAGGTGCAGAGTGCCGAAGAGGTGGAAGG
ACAAAGTGCGAGCAAGGACGGGAAGGCTAATTACCATGTTATCCTGCAGCAAGTTGCAAC
CAATAACAAGCAATTGTCAGATTGCATCAGAGCTGTAATTTTGAGCATTCAGACCGTGAG
TCTGATGATGGACAAATTCCAAGAGTGAATGTACTGTTTTGGTATCTACCGACAGACTAC
AACAGCATGCTACCAGTTCCCTCCTATGTATGGCTGGTGCCTCGCGTCGAAATGACAACG
TAGGATAGTCTTGTCG |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
Q94045 |
| Definition |
sp|Q94045|TCP4_CAEEL Putative RNA polymerase II transcriptional coactivator OS=Caenorhabditis elegans |
| Align length |
64 |
| Score (bit) |
31.6 |
| E-value |
1.5 |
| Report |
 |
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
Q24C45 |
| Definition |
tr|Q24C45|Q24C45_TETTH Cyclic nucleotide-binding domain containing protein OS=Tetrahymena thermophila SB210 |
| Align length |
71 |
| Score (bit) |
39.3 |
| E-value |
0.099 |
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917440|Adiantum capillus-veneris mRNA, clone:
YMU001_000100_H03.
(436 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|Q24C45|Q24C45_TETTH Cyclic nucleotide-binding domain containi... 39 0.099
tr|Q0HY78|Q0HY78_SHESR Putative uncharacterized protein OS=Shewa... 35 2.4
tr|Q7RHF5|Q7RHF5_PLAYO Putative uncharacterized protein PY04032 ... 34 3.2
tr|A9U3F5|A9U3F5_PHYPA Predicted protein OS=Physcomitrella paten... 34 4.1
tr|A4RRH6|A4RRH6_OSTLU Predicted protein OS=Ostreococcus lucimar... 34 4.1
tr|A0BLP3|A0BLP3_PARTE Chromosome undetermined scaffold_114, who... 34 4.1
tr|B0S753|B0S753_DANRE Novel protein similar to vertebrate outer... 33 5.4
tr|Q4UHR1|Q4UHR1_THEAN Amine oxidase (Flavin-containing) OS=Thei... 33 5.4
tr|Q22CJ0|Q22CJ0_TETTH Putative uncharacterized protein OS=Tetra... 33 5.4
tr|Q4YU53|Q4YU53_PLABE Putative uncharacterized protein (Fragmen... 33 7.1
>tr|Q24C45|Q24C45_TETTH Cyclic nucleotide-binding domain containing
protein OS=Tetrahymena thermophila SB210
GN=TTHERM_00697270 PE=4 SV=1
Length = 982
Score = 39.3 bits (90), Expect = 0.099
Identities = 24/71 (33%), Positives = 39/71 (54%)
Frame = +2
Query: 47 SIHTKGCTKKQLKRLIRSAAALDNAVSSQRAQKTRKVQSAEEVEGQSASKDGKANYHVIL 226
S H+ G TKKQ +RLI + +A + R+Q + QS +V GQ ++D + N +
Sbjct: 735 STHSIGITKKQSERLISAISATNEKAKRPRSQIEQ--QSIFKVNGQKLNEDEEGNNNQYY 792
Query: 227 QQVATNNKQLS 259
A+N++ LS
Sbjct: 793 NSFASNSEHLS 803
>tr|Q0HY78|Q0HY78_SHESR Putative uncharacterized protein
OS=Shewanella sp. (strain MR-7) GN=Shewmr7_0928 PE=4
SV=1
Length = 316
Score = 34.7 bits (78), Expect = 2.4
Identities = 24/85 (28%), Positives = 41/85 (48%)
Frame = +2
Query: 62 GCTKKQLKRLIRSAAALDNAVSSQRAQKTRKVQSAEEVEGQSASKDGKANYHVILQQVAT 241
G + KQ +RL R A+ + + T Q+ + SA+ D + L Q T
Sbjct: 32 GSSTKQAERLARYASIFNTVEGNTSFYATPNAQTV--MNWHSATPDD-FRFTFKLPQTIT 88
Query: 242 NNKQLSDCIRAVILSIQTVSLMMDK 316
+ KQL DC + ++ Q +SL+++K
Sbjct: 89 HQKQLQDCQQELLAFFQVMSLLVEK 113
>tr|Q7RHF5|Q7RHF5_PLAYO Putative uncharacterized protein PY04032
OS=Plasmodium yoelii yoelii GN=PY04032 PE=4 SV=1
Length = 1508
Score = 34.3 bits (77), Expect = 3.2
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Frame = +2
Query: 116 NAVSSQRAQK--TRKVQSAEEVEGQSASKDGKANYHVILQQVATNNKQLSDC 265
NA+S + Q +KVQ +E++ + + +D + NY V Q +TNN++ SDC
Sbjct: 365 NAISDENCQTRINKKVQKSEQIMREKSKEDNENNYDV--QNFSTNNEE-SDC 413
>tr|A9U3F5|A9U3F5_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_101282 PE=4 SV=1
Length = 682
Score = 33.9 bits (76), Expect = 4.1
Identities = 21/60 (35%), Positives = 29/60 (48%)
Frame = +2
Query: 20 EMCADDQEISIHTKGCTKKQLKRLIRSAAALDNAVSSQRAQKTRKVQSAEEVEGQSASKD 199
E C DQ IS H KG TK L +++ + S + K Q +EV G+S S+D
Sbjct: 244 ENCESDQPISRHVKGPTKTDL-QVVDGEFSSSQQPSDESQTKFTPPQPPQEVRGRSPSQD 302
>tr|A4RRH6|A4RRH6_OSTLU Predicted protein OS=Ostreococcus
lucimarinus (strain CCE9901) GN=OSTLU_29020 PE=3 SV=1
Length = 162
Score = 33.9 bits (76), Expect = 4.1
Identities = 26/89 (29%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Frame = +2
Query: 29 ADDQEISIHTKGCTKKQLKRLIRSAAALDNAVSSQRAQKTRK--VQSAEEVEGQSASKDG 202
AD++ ++ T +K+LKRL+R N VS+Q+A++ +K + S E+ E Q A++
Sbjct: 69 ADEERLNTITDEKERKRLKRLLR------NRVSAQQARERKKAYLASLEQTEAQKANR-- 120
Query: 203 KANYHVILQQVATNNKQLSDCIRAVILSI 289
H + +V T ++ + +R VI ++
Sbjct: 121 ---LHELENRVTTLERE-NQMLRQVIQTV 145
>tr|A0BLP3|A0BLP3_PARTE Chromosome undetermined scaffold_114, whole
genome shotgun sequence OS=Paramecium tetraurelia
GN=GSPATT00030093001 PE=4 SV=1
Length = 1948
Score = 33.9 bits (76), Expect = 4.1
Identities = 18/64 (28%), Positives = 34/64 (53%)
Frame = +2
Query: 125 SSQRAQKTRKVQSAEEVEGQSASKDGKANYHVILQQVATNNKQLSDCIRAVILSIQTVSL 304
S Q+ +KTRK Q+ ++ E Q ++ I +++ N +LSD I+ + IQ +
Sbjct: 1219 SQQQLEKTRKDQAQKQFEKQQVLENELVQLKEIKEELTQENSELSDIIQKQQIQIQDLQS 1278
Query: 305 MMDK 316
+D+
Sbjct: 1279 DLDE 1282
>tr|B0S753|B0S753_DANRE Novel protein similar to vertebrate outer
dense fiber of sperm tails 2 (ODF2) OS=Danio rerio
GN=si:ch211-251j10.4 PE=4 SV=1
Length = 810
Score = 33.5 bits (75), Expect = 5.4
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +2
Query: 71 KKQLKRLIRSAAALDNAVSSQRAQKTRKVQSAEEVEGQSASKDGKANYHVILQQVATNNK 250
+KQ ++ + +AA L + + AQ T + SAEE++ Q SK + + LQ NN+
Sbjct: 399 RKQAEKSVNTAAQLSAQLLEKEAQLTEALSSAEELQ-QRFSKQSREKSQLELQITTLNNR 457
Query: 251 --QLSD 262
+LSD
Sbjct: 458 LSELSD 463
>tr|Q4UHR1|Q4UHR1_THEAN Amine oxidase (Flavin-containing)
OS=Theileria annulata GN=TA06700 PE=4 SV=1
Length = 2594
Score = 33.5 bits (75), Expect = 5.4
Identities = 21/95 (22%), Positives = 44/95 (46%)
Frame = +2
Query: 32 DDQEISIHTKGCTKKQLKRLIRSAAALDNAVSSQRAQKTRKVQSAEEVEGQSASKDGKAN 211
+D+ IH G ++Q+ ++RS + N + + ++ S E+ + +K + N
Sbjct: 621 EDENSEIHENGFVERQITCIVRSLKLIKNEIEKHKVAMNERI-SNEKYKSLIYNK-AETN 678
Query: 212 YHVILQQVATNNKQLSDCIRAVILSIQTVSLMMDK 316
Y++ L V + + I+ +IL V L D+
Sbjct: 679 YYINLSNVLFHYNKFLFSIKKLILHYNNVGLDEDE 713
>tr|Q22CJ0|Q22CJ0_TETTH Putative uncharacterized protein
OS=Tetrahymena thermophila SB210 GN=TTHERM_01043190 PE=4
SV=1
Length = 1332
Score = 33.5 bits (75), Expect = 5.4
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 4/121 (3%)
Frame = +2
Query: 32 DDQEISIHTKGCTKKQLKRLIRSAAALDNAVSSQRAQKTRKVQSAEEVEGQSASKDGKAN 211
D +I HT+G KQL L+++ N + Q Q +K+ + + +S + K N
Sbjct: 67 DKYQIGQHTQGSINKQLDNLMQA-----NNHNVQFGQMKKKITKIQVFQKKSDNNPDKIN 121
Query: 212 YHVILQQVATNNKQLSDCIRAVILSIQTVSLMMDKFQE*MYC-FGIYR---QTTTACYQF 379
H++LQ C + +I I+ + L D ++E Y IY+ + T +Q+
Sbjct: 122 IHMLLQY------SQKKCDQNLIQKIKRM-LKADSYEERQYIRSSIYKNFYRPHTDIFQY 174
Query: 380 P 382
P
Sbjct: 175 P 175
>tr|Q4YU53|Q4YU53_PLABE Putative uncharacterized protein (Fragment)
OS=Plasmodium berghei GN=PB001072.02.0 PE=4 SV=1
Length = 829
Score = 33.1 bits (74), Expect = 7.1
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Frame = +2
Query: 116 NAVSSQRAQK--TRKVQSAEEVEGQSASKDGKANYHVILQQVATNNKQLSDC 265
NA+S + Q +KVQ E++ + + D + NY V Q +TNN++ SDC
Sbjct: 357 NAISDENCQTKINKKVQKGEQIMREKSKDDNENNYDV--QNFSTNNEE-SDC 405
|