BP917442
Clone id YMU001_000100_H05
Library
Length 556
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000100_H05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
ATGTGTGGAGACTACCACAATGCTTGTATGTAAAGATGCGCATTACGAGGAATTAGGAAG
GCTTTTAGAAGAGGACTGGGGTTCTGTGGAGGGCATGCACAACGGGGACCGGTATCGTTG
TAAGGTTGGAGCTTCAGGTATTGGAATGCGCTATTTGAAATCCCGCACCTCCTTGTACAT
ACGATTTCACTATGATCGTTGGATGTGCAAGTTTGGAGTGTGGACTCCCTTACAGAGTGT
AGACGGCGCTATTGCAAGCTTTGACATTGCAGTGAAGATGTCCAACGATGCTTTGGAGGC
AGTCCAAGTGAACAAGCATTGGACTCTCAGTAATGTTCGAGAACATTTGGTTATTATGGG
TTTCGAGGCCCTTTAACAAGCACAATTTCGTTTACAAGGTCACAAGGTGAGAATCCTTCC
ATCACATTTTCAATACATCATGGTTTGTCGATCATTGGATGCTTATTGTAATGAATGTCC
GGAGATTGGGAAGAGACTGGAAGACAAATTGAAGGTCGAGGAGGACTGGGAGATAGATGG
AACTATGCTATCGATC
■■Homology search results ■■ -
sp_hit_id P0A560
Definition sp|P0A560|EMBA_MYCTU Probable arabinosyltransferase A OS=Mycobacterium tuberculosis
Align length 64
Score (bit) 30.8
E-value 4.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917442|Adiantum capillus-veneris mRNA, clone:
YMU001_000100_H05.
(556 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P0A560|EMBA_MYCTU Probable arabinosyltransferase A OS=Mycobac... 31 4.7
sp|P0A561|EMBA_MYCBO Probable arabinosyltransferase A OS=Mycobac... 31 4.7
sp|Q9IBI4|DPOL_HBVG3 Protein P OS=Hepatitis B virus genotype G (... 31 4.7
sp|Q8QZQ2|DPOL_HBVG2 Protein P OS=Hepatitis B virus genotype G (... 31 4.7
sp|Q5T9S5|CCD18_HUMAN Coiled-coil domain-containing protein 18 O... 30 6.1
sp|Q9J5S2|DPOL_HBVOR Protein P OS=Orangutan hepatitis B virus (i... 30 8.0
sp|P87744|DPOL_HBVGB Protein P OS=Gibbon hepatitis B virus subty... 30 8.0
sp|Q69602|DPOL_HBVE1 Protein P OS=Hepatitis B virus genotype E s... 30 8.0

>sp|P0A560|EMBA_MYCTU Probable arabinosyltransferase A
OS=Mycobacterium tuberculosis GN=embA PE=3 SV=1
Length = 1094

Score = 30.8 bits (68), Expect = 4.7
Identities = 18/64 (28%), Positives = 31/64 (48%)
Frame = +2

Query: 80 GSVEGMHNGDRYRCKVGASGIGMRYLKSRTSLYIRFHYDRWMCKFGVWTPLQSVDGAIAS 259
G V G+ +G +R +G + +G+ L + F +W +FG + L V GA+ +
Sbjct: 539 GRVAGLASGPAWRL-IGTTAVGL--------LLLTFTPTKWAVQFGAFAGLAGVLGAVTA 589

Query: 260 FDIA 271
F A
Sbjct: 590 FTFA 593


>sp|P0A561|EMBA_MYCBO Probable arabinosyltransferase A
OS=Mycobacterium bovis GN=embA PE=3 SV=1
Length = 1094

Score = 30.8 bits (68), Expect = 4.7
Identities = 18/64 (28%), Positives = 31/64 (48%)
Frame = +2

Query: 80 GSVEGMHNGDRYRCKVGASGIGMRYLKSRTSLYIRFHYDRWMCKFGVWTPLQSVDGAIAS 259
G V G+ +G +R +G + +G+ L + F +W +FG + L V GA+ +
Sbjct: 539 GRVAGLASGPAWRL-IGTTAVGL--------LLLTFTPTKWAVQFGAFAGLAGVLGAVTA 589

Query: 260 FDIA 271
F A
Sbjct: 590 FTFA 593


>sp|Q9IBI4|DPOL_HBVG3 Protein P OS=Hepatitis B virus genotype G
(isolate IG29227/2000) GN=P PE=3 SV=1
Length = 842

Score = 30.8 bits (68), Expect = 4.7
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +1

Query: 265 HCSEDVQRCFGGSPSEQALDSQ*CSRTFGYYGFRGPLT 378
H ++ +++CF P + +D + C R G GF P T
Sbjct: 609 HITQKIKQCFRKLPVNRPIDWKVCQRITGLLGFAAPFT 646


>sp|Q8QZQ2|DPOL_HBVG2 Protein P OS=Hepatitis B virus genotype G
(isolate United States of America/USG17/2002) GN=P PE=3
SV=1
Length = 842

Score = 30.8 bits (68), Expect = 4.7
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +1

Query: 265 HCSEDVQRCFGGSPSEQALDSQ*CSRTFGYYGFRGPLT 378
H ++ +++CF P + +D + C R G GF P T
Sbjct: 609 HITQKIKQCFRKLPVNRPIDWKVCQRITGLLGFAAPFT 646


>sp|Q5T9S5|CCD18_HUMAN Coiled-coil domain-containing protein 18
OS=Homo sapiens GN=CCDC18 PE=1 SV=1
Length = 1454

Score = 30.4 bits (67), Expect = 6.1
Identities = 35/138 (25%), Positives = 56/138 (40%), Gaps = 8/138 (5%)
Frame = +2

Query: 23 LVCKDAHYEELGRLLEEDWGSV--EGMHNGDRYRC---KVGASGIGMRYLKSRTSLYIRF 187
++CK H E L RLL E G + E M + + +V I +R L S +
Sbjct: 679 IICKQHHLESLDRLLTESKGEMKKENMKKDEALKALQNQVSEETIKVRQLDSALEI---- 734

Query: 188 HYDRWMCKFGVWTPLQSVDGAIASFDIAVKMSNDALEAVQVN---KHWTLSNVREHLVIM 358
CK + L ++G F+ +K ++ + +Q K+ +L E VI+
Sbjct: 735 ------CKEELVLHLNQLEGNKEKFEKQLKKKSEEVYCLQKELKIKNHSLQETSEQNVIL 788

Query: 359 GFEAL*QAQFRLQGHKVR 412
L Q Q LQ +R
Sbjct: 789 Q-HTLQQQQQMLQQETIR 805


>sp|Q9J5S2|DPOL_HBVOR Protein P OS=Orangutan hepatitis B virus
(isolate Somad) GN=P PE=3 SV=1
Length = 832

Score = 30.0 bits (66), Expect = 8.0
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +1

Query: 265 HCSEDVQRCFGGSPSEQALDSQ*CSRTFGYYGFRGPLT 378
H + +++CF P + +D + C R G GF P T
Sbjct: 599 HIVQKIKQCFRKLPVNRPIDWKVCQRIVGLLGFAAPFT 636


>sp|P87744|DPOL_HBVGB Protein P OS=Gibbon hepatitis B virus subtype
ayw3q (isolate Hope) GN=P PE=3 SV=1
Length = 832

Score = 30.0 bits (66), Expect = 8.0
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +1

Query: 265 HCSEDVQRCFGGSPSEQALDSQ*CSRTFGYYGFRGPLT 378
H + +++CF P + +D + C R G GF P T
Sbjct: 599 HIVQKIKQCFRKLPVNRPIDWKVCQRIVGLLGFAAPFT 636


>sp|Q69602|DPOL_HBVE1 Protein P OS=Hepatitis B virus genotype E
subtype ayw4 (isolate Kou) GN=P PE=3 SV=1
Length = 842

Score = 30.0 bits (66), Expect = 8.0
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +1

Query: 265 HCSEDVQRCFGGSPSEQALDSQ*CSRTFGYYGFRGPLT 378
H + ++ CFG P + +D + C G GF P T
Sbjct: 609 HIIQKIKHCFGKLPVNRPIDWKVCQGIVGLLGFAAPFT 646


tr_hit_id A4T6D3
Definition tr|A4T6D3|A4T6D3_MYCGI Cell wall arabinan synthesis protein OS=Mycobacterium gilvum (strain PYR-GCK)
Align length 64
Score (bit) 37.0
E-value 0.72
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917442|Adiantum capillus-veneris mRNA, clone:
YMU001_000100_H05.
(556 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A4T6D3|A4T6D3_MYCGI Cell wall arabinan synthesis protein OS=M... 37 0.72
tr|B0YJR7|B0YJR7_HBV Polymerase OS=Hepatitis B virus GN=P PE=4 SV=1 34 4.6
tr|B8P5R6|B8P5R6_9APHY Predicted protein OS=Postia placenta Mad-... 34 6.0
tr|A6C500|A6C500_9PLAN Putative uncharacterized protein OS=Planc... 34 6.1
tr|A7ENA9|A7ENA9_SCLS1 Putative uncharacterized protein OS=Scler... 33 7.8
tr|Q0VNX2|Q0VNX2_ALCBS Putative uncharacterized protein OS=Alcan... 33 7.9

>tr|A4T6D3|A4T6D3_MYCGI Cell wall arabinan synthesis protein
OS=Mycobacterium gilvum (strain PYR-GCK) GN=Mflv_1174
PE=4 SV=1
Length = 1071

Score = 37.0 bits (84), Expect = 0.72
Identities = 22/64 (34%), Positives = 32/64 (50%)
Frame = +2

Query: 80 GSVEGMHNGDRYRCKVGASGIGMRYLKSRTSLYIRFHYDRWMCKFGVWTPLQSVDGAIAS 259
GSV G HNG +R VG +GIG+ L + +W +FG + L GA+ +
Sbjct: 517 GSVPGAHNGPVWRL-VGTTGIGL--------LLLTLTPTKWAVQFGAFAGLAGALGAVTA 567

Query: 260 FDIA 271
F +A
Sbjct: 568 FGVA 571


>tr|B0YJR7|B0YJR7_HBV Polymerase OS=Hepatitis B virus GN=P PE=4 SV=1
Length = 842

Score = 34.3 bits (77), Expect = 4.6
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +1

Query: 265 HCSEDVQRCFGGSPSEQALDSQ*CSRTFGYYGFRGPLT 378
H ++ +++CFG P + +D + C R G GF P T
Sbjct: 609 HIAQKIKQCFGKLPVNRPIDWKVCQRIVGLLGFAAPFT 646


>tr|B8P5R6|B8P5R6_9APHY Predicted protein OS=Postia placenta
Mad-698-R GN=POSPLDRAFT_90946 PE=4 SV=1
Length = 804

Score = 33.9 bits (76), Expect = 6.0
Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 10/98 (10%)
Frame = -3

Query: 305 GLPPKHRWTSSLQCQSLQ*RRLHSVRESTLQTCTSNDHSEIVCT---------RRCGISN 153
G P+ W S L R+L +VR+ ++ + S++VC+ RC +
Sbjct: 516 GREPRTNWRSKL-------RKLRTVRDVNIRAWSLGPPSKLVCSDIAIRACWNNRCDGAA 568

Query: 152 SAFQYLKLQPYNDTGPRCACPPQNPSP-LLKAFLIPRN 42
SAF + P D R PP +P L +FL R+
Sbjct: 569 SAFVHELAMPVRDNRVRGLRPPATRAPELASSFLTTRH 606


>tr|A6C500|A6C500_9PLAN Putative uncharacterized protein
OS=Planctomyces maris DSM 8797 GN=PM8797T_20743 PE=4
SV=1
Length = 1337

Score = 33.9 bits (76), Expect = 6.1
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = -1

Query: 220 HSKLAHPTIIVKSYVQGGAGFQIAHSNT*SSNLTTIPVPVVHALHRTPVL 71
+S +++ + QGG ++ +NT + T VPVVH L+ TP++
Sbjct: 789 NSSTTSSVLLIDNAGQGGTAGSVSFNNTTVTGTTNAAVPVVHILNTTPIV 838


>tr|A7ENA9|A7ENA9_SCLS1 Putative uncharacterized protein
OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 /
Ss-1) GN=SS1G_06808 PE=4 SV=1
Length = 465

Score = 33.5 bits (75), Expect = 7.8
Identities = 19/52 (36%), Positives = 26/52 (50%)
Frame = -3

Query: 230 RESTLQTCTSNDHSEIVCTRRCGISNSAFQYLKLQPYNDTGPRCACPPQNPS 75
RE+ +Q TS I T+ IS F+ L+L ++ GPR PQN S
Sbjct: 150 RENAVQVTTSGFEYTIKATKEVIISAGVFRSLQLLMVSEIGPRAVLEPQNIS 201


>tr|Q0VNX2|Q0VNX2_ALCBS Putative uncharacterized protein
OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 /
DSM 11573) GN=ABO_1678 PE=4 SV=1
Length = 208

Score = 33.5 bits (75), Expect = 7.9
Identities = 27/95 (28%), Positives = 39/95 (41%), Gaps = 22/95 (23%)
Frame = +2

Query: 41 HYEELGRLLEEDWGSVEGMHNGDRY--------------RCKVGASGIGMRYLKSRTSLY 178
H+ EL +L G++E M +RY C G SG+G+R + +
Sbjct: 60 HWLELSQLE----GAIERMLPDERYGALRDDLVLLADMTACLFGVSGLGLRVTALQAPMC 115

Query: 179 IRFHYD----RWMCKFG----VWTPLQSVDGAIAS 259
RFH D R +C +G W P VD + S
Sbjct: 116 PRFHVDRIPVRLLCTYGGQGSQWLPFDCVDDQLLS 150