BP917444
Clone id YMU001_000100_H07
Library
Length 474
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000100_H07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TCTTCATCACACAGCCTCTTCCCGCGGCCAGTCCCAAAGTTTCCAAGACTCAACTTTACG
AACTTCGTTGCTCTCATTCTCTCTCCAGGCGCAATTTTTCATTAACAAGCACCACTCCCC
CACGATCGACGCCTTCAGCACCAGGTTTCCTTCTCCCAGTCGGTGTAGCTCACTCACGGA
AAGCAGCAGGAGGTAGCTCATTCTTCTGTTAATTAAACCCTCTTTCTTTAATGCTTTCTC
TCTGAGTGGCGCCTCCATCATACTTCAAATTCTGCATATTTTCTTCACCGCTTTGGCACC
AATTCTCCTCCACTTCGTCAGAAGCAGAAAACCTGCCACCTCCACTGCCACTGCCGCATA
GGCCTTGTGTATCAAGGATCCACCATTGTTTTATTTCTTTGCTACCCAACTCCTCATTGA
TCATCTGAAACTACCCATTTTATCATCTGCGGACTACCCATTTTTGCTCTAAAC
■■Homology search results ■■ -
sp_hit_id Q89ZW9
Definition sp|Q89ZW9|G1092_BACTN Glycosyl hydrolase family 109 protein 2 OS=Bacteroides thetaiotaomicron
Align length 78
Score (bit) 29.3
E-value 9.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917444|Adiantum capillus-veneris mRNA, clone:
YMU001_000100_H07.
(474 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q89ZW9|G1092_BACTN Glycosyl hydrolase family 109 protein 2 OS... 29 9.4

>sp|Q89ZW9|G1092_BACTN Glycosyl hydrolase family 109 protein 2
OS=Bacteroides thetaiotaomicron GN=BT_4252 PE=3 SV=1
Length = 419

Score = 29.3 bits (64), Expect = 9.4
Identities = 25/78 (32%), Positives = 32/78 (41%)
Frame = +1

Query: 235 FLSEWRLHHTSNSAYFLHRFGTNSPPLRQKQKTCHLHCHCRIGLVYQGSTIVLFLCYPTP 414
+L H S Y RFG NSP RQK K + + + +G TI+L TP
Sbjct: 234 YLVSMSTHQAGMSEYARKRFGENSPEARQKYKLGDV--NTTLIHTAKGKTIMLQYNVSTP 291

Query: 415 H*SSETTHFIICGLPIFA 468
S +CG FA
Sbjct: 292 RPYSRLQ--TVCGTLGFA 307


tr_hit_id A1BAH8
Definition tr|A1BAH8|A1BAH8_PARDP RNA binding S1 domain protein OS=Paracoccus denitrificans (strain Pd 1222)
Align length 46
Score (bit) 32.7
E-value 9.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917444|Adiantum capillus-veneris mRNA, clone:
YMU001_000100_H07.
(474 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A1BAH8|A1BAH8_PARDP RNA binding S1 domain protein OS=Paracocc... 33 9.3

>tr|A1BAH8|A1BAH8_PARDP RNA binding S1 domain protein OS=Paracoccus
denitrificans (strain Pd 1222) GN=Pden_4458 PE=4 SV=1
Length = 770

Score = 32.7 bits (73), Expect = 9.3
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = -3

Query: 268 LKYDGGATQRESIKERGFN*QKNELPPAAFRE*ATPTGRRKPGAEG 131
++ DGGA+ R++ KERG + PA + A P G+ +PGA G
Sbjct: 720 MRKDGGASARDAQKERG-----PKAQPARGPKSAAPAGKEQPGALG 760