BP917446 |
Clone id |
YMU001_000100_H09 |
Library |
YMU01 |
Length |
279 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000100_H09. |
Accession |
BP917446 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
GTCTTGCCAGTTCCTGGGGCACCAGCCAGTAGCAAAGCACGGTCAGCCATCTTTTTTTGG CGGATCATATCAACGACAAGACCTGCTGCTTCTCTAGCCTGCTCTTGTCCAACAAAACCA GACCCGATACCTAGAGCAGTGCCATCCTCCTTCAAGCCCAGGCCCTTAATGTGCGTATGT GAAGCTACACGCTGTTTCTTGGTAGTGGACTGCACCTCTTCTATCTTCATCTCCGCTCGA GCAAAGCTTGGAGCACGGGCAGCGCGCGAGCTCGGTTTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P60123 |
Definition |
sp|P60123|RUVB1_RAT RuvB-like 1 OS=Rattus norvegicus |
Align length |
76 |
Score (bit) |
107.0 |
E-value |
2.0e-23 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9RE67 |
Definition |
tr|A9RE67|A9RE67_PHYPA DNA helicase, TBP-interacting protein OS=Physcomitrella patens subsp. patens |
Align length |
76 |
Score (bit) |
139.0 |
E-value |
9.0e-32 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917446|Adiantum capillus-veneris mRNA, clone: YMU001_000100_H09. (279 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9RE67|A9RE67_PHYPA DNA helicase, TBP-interacting protein OS=... 139 9e-32 tr|A8J4W8|A8J4W8_CHLRE Predicted protein OS=Chlamydomonas reinha... 123 5e-27 tr|A1YQY4|A1YQY4_VOLCA Pontin OS=Volvox carteri f. nagariensis G... 122 9e-27 tr|Q9M3Z6|Q9M3Z6_CICAR Putative Ruv DNA-helicase OS=Cicer arieti... 121 2e-26 tr|Q0D878|Q0D878_ORYSJ Os07g0178900 protein OS=Oryza sativa subs... 120 3e-26 tr|B8B7Q1|B8B7Q1_ORYSI Putative uncharacterized protein OS=Oryza... 120 3e-26 tr|B7FAF4|B7FAF4_ORYSJ cDNA, clone: J100068H15, full insert sequ... 120 3e-26 tr|A7NZI9|A7NZI9_VITVI Chromosome chr6 scaffold_3, whole genome ... 119 1e-25 tr|Q5QMH1|Q5QMH1_ORYSJ cDNA clone:001-124-H05, full insert seque... 118 1e-25 tr|Q5QMH0|Q5QMH0_ORYSJ cDNA clone:002-115-C01, full insert seque... 118 1e-25 tr|A2WWS5|A2WWS5_ORYSI Putative uncharacterized protein OS=Oryza... 118 1e-25 tr|B4F9I2|B4F9I2_MAIZE Putative uncharacterized protein OS=Zea m... 114 2e-24 tr|Q9FMR9|Q9FMR9_ARATH Ruv DNA-helicase-like protein OS=Arabidop... 114 3e-24 tr|B4FRM0|B4FRM0_MAIZE Putative uncharacterized protein OS=Zea m... 113 4e-24 tr|A4HB68|A4HB68_LEIBR Ruvb-like 1 DNA helicase, putative OS=Lei... 112 1e-23 tr|Q6ZLD7|Q6ZLD7_ORYSJ Putative RuvB-like protein 1,49-kDa TATA ... 111 2e-23 tr|Q5DAM8|Q5DAM8_SCHJA SJCHGC00923 protein OS=Schistosoma japoni... 111 2e-23 tr|A0DR15|A0DR15_PARTE Chromosome undetermined scaffold_6, whole... 111 2e-23 tr|A0CVX0|A0CVX0_PARTE Chromosome undetermined scaffold_3, whole... 111 2e-23 tr|B7PYR8|B7PYR8_IXOSC Putative uncharacterized protein OS=Ixode... 110 3e-23 tr|Q4Q2J4|Q4Q2J4_LEIMA Ruvb-like 1 DNA helicase, putative OS=Lei... 110 4e-23 tr|A4IAB6|A4IAB6_LEIIN Ruvb-like 1 DNA helicase, putative OS=Lei... 110 4e-23 tr|A0BIB3|A0BIB3_PARTE Chromosome undetermined scaffold_11, whol... 110 4e-23 tr|B6ND83|B6ND83_BRAFL Putative uncharacterized protein OS=Branc... 109 6e-23 tr|B4JIM2|B4JIM2_DROGR GH19121 OS=Drosophila grimshawi GN=GH1912... 109 6e-23 tr|A9UPH5|A9UPH5_MONBE Predicted protein OS=Monosiga brevicollis... 109 8e-23 tr|Q5ZIC4|Q5ZIC4_CHICK Putative uncharacterized protein OS=Gallu... 108 2e-22 tr|A7S760|A7S760_NEMVE Predicted protein OS=Nematostella vectens... 108 2e-22 tr|A4RWN4|A4RWN4_OSTLU Predicted protein OS=Ostreococcus lucimar... 107 2e-22 tr|B3LW03|B3LW03_DROAN GF17460 OS=Drosophila ananassae GN=GF1746... 107 2e-22
>tr|A9RE67|A9RE67_PHYPA DNA helicase, TBP-interacting protein OS=Physcomitrella patens subsp. patens GN=RUVBL1501 PE=4 SV=1 Length = 456
Score = 139 bits (349), Expect = 9e-32 Identities = 70/76 (92%), Positives = 73/76 (96%) Frame = -2
Query: 230 MKIEEVQSTTKKQRVASHTHIKGLGLKEDGTALGIGSGFVGQEQAREAAGLVVDMIRQKK 51 MKIEEVQSTTKKQRVASHTHIKGLGLKEDGTA+ + +GFVGQEQAREAAGLVVDMIRQKK Sbjct: 1 MKIEEVQSTTKKQRVASHTHIKGLGLKEDGTAMDVAAGFVGQEQAREAAGLVVDMIRQKK 60
Query: 50 MADRALLLAGAPGTGK 3 MA RALLLAGAPGTGK Sbjct: 61 MAGRALLLAGAPGTGK 76
>tr|A8J4W8|A8J4W8_CHLRE Predicted protein OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_192123 PE=4 SV=1 Length = 455
Score = 123 bits (308), Expect = 5e-27 Identities = 61/76 (80%), Positives = 69/76 (90%) Frame = -2
Query: 230 MKIEEVQSTTKKQRVASHTHIKGLGLKEDGTALGIGSGFVGQEQAREAAGLVVDMIRQKK 51 M+IEEV STTK QRVA+HTHIKGLGL+++GTAL + +GFVGQEQAREA G+VVDMIRQKK Sbjct: 1 MRIEEVSSTTKTQRVATHTHIKGLGLQDNGTALPMSAGFVGQEQAREACGVVVDMIRQKK 60
Query: 50 MADRALLLAGAPGTGK 3 MA RALLL GAPGTGK Sbjct: 61 MAGRALLLTGAPGTGK 76
>tr|A1YQY4|A1YQY4_VOLCA Pontin OS=Volvox carteri f. nagariensis GN=ponA PE=4 SV=1 Length = 455
Score = 122 bits (306), Expect = 9e-27 Identities = 60/76 (78%), Positives = 69/76 (90%) Frame = -2
Query: 230 MKIEEVQSTTKKQRVASHTHIKGLGLKEDGTALGIGSGFVGQEQAREAAGLVVDMIRQKK 51 M+IEEV STTK QRVA+HTHIKGLGL+++GTAL + +GFVGQEQAREA G+VVD+IRQKK Sbjct: 1 MRIEEVSSTTKTQRVATHTHIKGLGLQDNGTALPLAAGFVGQEQAREACGVVVDLIRQKK 60
Query: 50 MADRALLLAGAPGTGK 3 MA RALLL GAPGTGK Sbjct: 61 MAGRALLLTGAPGTGK 76
>tr|Q9M3Z6|Q9M3Z6_CICAR Putative Ruv DNA-helicase OS=Cicer arietinum PE=2 SV=1 Length = 458
Score = 121 bits (304), Expect = 2e-26 Identities = 62/77 (80%), Positives = 67/77 (87%) Frame = -2
Query: 233 EMKIEEVQSTTKKQRVASHTHIKGLGLKEDGTALGIGSGFVGQEQAREAAGLVVDMIRQK 54 +MKIEEVQSTTKKQRVA+HTHIKGLGL+ G AL SGFVGQ +AREA GLVVDMIRQK Sbjct: 3 KMKIEEVQSTTKKQRVATHTHIKGLGLEVSGKALPFASGFVGQAEAREACGLVVDMIRQK 62
Query: 53 KMADRALLLAGAPGTGK 3 KMA +ALLLAG PGTGK Sbjct: 63 KMAGKALLLAGPPGTGK 79
>tr|Q0D878|Q0D878_ORYSJ Os07g0178900 protein OS=Oryza sativa subsp. japonica GN=Os07g0178900 PE=4 SV=1 Length = 464
Score = 120 bits (302), Expect = 3e-26 Identities = 60/76 (78%), Positives = 67/76 (88%) Frame = -2
Query: 230 MKIEEVQSTTKKQRVASHTHIKGLGLKEDGTALGIGSGFVGQEQAREAAGLVVDMIRQKK 51 M+IEEVQSTTKKQR+A+HTHIKGLGL +G A+G+ +GFVGQ AREAAGLVVDMIRQKK Sbjct: 1 MRIEEVQSTTKKQRIATHTHIKGLGLDANGAAIGLAAGFVGQGAAREAAGLVVDMIRQKK 60
Query: 50 MADRALLLAGAPGTGK 3 MA RALLLAG P TGK Sbjct: 61 MAGRALLLAGPPATGK 76
>tr|B8B7Q1|B8B7Q1_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_25110 PE=4 SV=1 Length = 455
Score = 120 bits (302), Expect = 3e-26 Identities = 60/76 (78%), Positives = 67/76 (88%) Frame = -2
Query: 230 MKIEEVQSTTKKQRVASHTHIKGLGLKEDGTALGIGSGFVGQEQAREAAGLVVDMIRQKK 51 M+IEEVQSTTKKQR+A+HTHIKGLGL +G A+G+ +GFVGQ AREAAGLVVDMIRQKK Sbjct: 1 MRIEEVQSTTKKQRIATHTHIKGLGLDANGAAIGLAAGFVGQGAAREAAGLVVDMIRQKK 60
Query: 50 MADRALLLAGAPGTGK 3 MA RALLLAG P TGK Sbjct: 61 MAGRALLLAGPPATGK 76
>tr|B7FAF4|B7FAF4_ORYSJ cDNA, clone: J100068H15, full insert sequence OS=Oryza sativa subsp. japonica PE=2 SV=1 Length = 455
Score = 120 bits (302), Expect = 3e-26 Identities = 60/76 (78%), Positives = 67/76 (88%) Frame = -2
Query: 230 MKIEEVQSTTKKQRVASHTHIKGLGLKEDGTALGIGSGFVGQEQAREAAGLVVDMIRQKK 51 M+IEEVQSTTKKQR+A+HTHIKGLGL +G A+G+ +GFVGQ AREAAGLVVDMIRQKK Sbjct: 1 MRIEEVQSTTKKQRIATHTHIKGLGLDANGAAIGLAAGFVGQGAAREAAGLVVDMIRQKK 60
Query: 50 MADRALLLAGAPGTGK 3 MA RALLLAG P TGK Sbjct: 61 MAGRALLLAGPPATGK 76
>tr|A7NZI9|A7NZI9_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00024530001 PE=4 SV=1 Length = 454
Score = 119 bits (297), Expect = 1e-25 Identities = 60/76 (78%), Positives = 67/76 (88%) Frame = -2
Query: 230 MKIEEVQSTTKKQRVASHTHIKGLGLKEDGTALGIGSGFVGQEQAREAAGLVVDMIRQKK 51 MKIEEVQSTTKKQRVA+HTHIKGLGL+ +G A+ + +GFVGQ AREA+GLVVDMIRQKK Sbjct: 1 MKIEEVQSTTKKQRVATHTHIKGLGLEANGNAIPLAAGFVGQIGAREASGLVVDMIRQKK 60
Query: 50 MADRALLLAGAPGTGK 3 MA RALL AG PGTGK Sbjct: 61 MAGRALLFAGPPGTGK 76
>tr|Q5QMH1|Q5QMH1_ORYSJ cDNA clone:001-124-H05, full insert sequence OS=Oryza sativa subsp. japonica GN=P0506B12.43-1 PE=2 SV=1 Length = 455
Score = 118 bits (296), Expect = 1e-25 Identities = 59/76 (77%), Positives = 65/76 (85%) Frame = -2
Query: 230 MKIEEVQSTTKKQRVASHTHIKGLGLKEDGTALGIGSGFVGQEQAREAAGLVVDMIRQKK 51 M+IEEVQS KKQR+A+HTHIKGLGL +G A+G+ SGFVGQ AREAAGLVVDMIRQKK Sbjct: 1 MRIEEVQSAAKKQRIATHTHIKGLGLDANGAAIGLASGFVGQAAAREAAGLVVDMIRQKK 60
Query: 50 MADRALLLAGAPGTGK 3 MA RALLLAG P TGK Sbjct: 61 MAGRALLLAGPPATGK 76
>tr|Q5QMH0|Q5QMH0_ORYSJ cDNA clone:002-115-C01, full insert sequence OS=Oryza sativa subsp. japonica GN=P0506B12.43-2 PE=2 SV=1 Length = 198
Score = 118 bits (296), Expect = 1e-25 Identities = 59/76 (77%), Positives = 65/76 (85%) Frame = -2
Query: 230 MKIEEVQSTTKKQRVASHTHIKGLGLKEDGTALGIGSGFVGQEQAREAAGLVVDMIRQKK 51 M+IEEVQS KKQR+A+HTHIKGLGL +G A+G+ SGFVGQ AREAAGLVVDMIRQKK Sbjct: 1 MRIEEVQSAAKKQRIATHTHIKGLGLDANGAAIGLASGFVGQAAAREAAGLVVDMIRQKK 60
Query: 50 MADRALLLAGAPGTGK 3 MA RALLLAG P TGK Sbjct: 61 MAGRALLLAGPPATGK 76
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