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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP917448
Clone id YMU001_000100_H11
Library
Length 364
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000100_H11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CTGAGAAGCTGTTGCCTTTTCTCGAATTCTGTATTCACTATTGCTGAGGCTACCCCAACC
ACTCTCGTTGTCGCCATCATCGTCGTCGTCAACCATACTCATTGCCATCTCTTCGGCTTC
ATCTTCGGGAGGAGGTGGAACCCAGATTGCCTCATTGTTCTCCACGTCTACAAACTCTTC
ACCAACTGCAGGAGTGGAATCATGAACCAAAGAGGGTGTGTAAAAATCGCTTTCATCGAC
ACTTTCTTCTGGCCCTTCGTAATCATCAGACGATAGCATGGATCTCCTGGAGAGGCTTCT
TACAACATGTGGGGATTTCTCCATTCCCAAGCTAACCTCCTCACACCTTATCTCATCATC
TGTG
■■Homology search results ■■ -
sp_hit_id Q6ZPY5
Definition sp|Q6ZPY5|ZN507_MOUSE Zinc finger protein 507 OS=Mus musculus
Align length 70
Score (bit) 31.2
E-value 1.7
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917448|Adiantum capillus-veneris mRNA, clone:
YMU001_000100_H11.
         (364 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6ZPY5|ZN507_MOUSE Zinc finger protein 507 OS=Mus musculus GN...    31   1.7  
sp|O04940|CDS1_SOLTU Phosphatidate cytidylyltransferase OS=Solan...    31   2.2  
sp|O04928|CDS1_ARATH Phosphatidate cytidylyltransferase OS=Arabi...    31   2.2  
sp|Q9H1H9|KI13A_HUMAN Kinesin-like protein KIF13A OS=Homo sapien...    30   4.9  
sp|Q8NGJ3|O52E1_HUMAN Olfactory receptor 52E1 OS=Homo sapiens GN...    29   6.4  
sp|A1DB13|CFT1_NEOFI Protein cft1 OS=Neosartorya fischeri (strai...    29   8.4  
sp|O61366|GPRS_DROME Serine-enriched protein OS=Drosophila melan...    29   8.4  
sp|Q9NXF7|CD030_HUMAN Uncharacterized protein C4orf30 OS=Homo sa...    29   8.4  

>sp|Q6ZPY5|ZN507_MOUSE Zinc finger protein 507 OS=Mus musculus
           GN=Znf507 PE=2 SV=2
          Length = 941

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
 Frame = +3

Query: 72  RHHRRRQPYSLPSLRLHLREEVEP----RLPHCSPRLQTLHQLQEWNHEPKRVCKNRFHR 239
           R HR+RQPY  P    H+ E  +      + HC  R   +HQ ++        CK  F  
Sbjct: 650 RVHRQRQPYQCPICE-HIAENSKDLESHMINHCKTR---IHQCKQ--------CKESF-- 695

Query: 240 HFLLALRNHQ 269
           H+   LRNH+
Sbjct: 696 HYKSQLRNHE 705


>sp|O04940|CDS1_SOLTU Phosphatidate cytidylyltransferase OS=Solanum
           tuberosum GN=CDS1 PE=2 SV=1
          Length = 424

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
 Frame = +1

Query: 16  LFSNSVFTIA---EATPTTLVVAIIVVVNHTHCHLFGFIFGR 132
           +F+ S FT+A   E     L+ A ++V+N    + FGF FGR
Sbjct: 191 VFTQSAFTVANIFEGIFWFLLPASLIVINDIAAYFFGFFFGR 232


>sp|O04928|CDS1_ARATH Phosphatidate cytidylyltransferase
           OS=Arabidopsis thaliana GN=CDS1 PE=2 SV=1
          Length = 421

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
 Frame = +1

Query: 16  LFSNSVFTIA---EATPTTLVVAIIVVVNHTHCHLFGFIFGR 132
           +F+ S FT+A   E     L+ A ++++N    ++FGF FGR
Sbjct: 191 VFTQSSFTVANIFEGIFWFLLPASLIIINDIFAYIFGFFFGR 232


>sp|Q9H1H9|KI13A_HUMAN Kinesin-like protein KIF13A OS=Homo sapiens
            GN=KIF13A PE=1 SV=2
          Length = 1805

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -2

Query: 246  ESVDESDFYTPSLVHDSTPAVGEEFVDVE 160
            +  D ++  TPSLVHD  P+  +E  +VE
Sbjct: 1628 KDADSTEHSTPSLVHDFRPSSNKELTEVE 1656


>sp|Q8NGJ3|O52E1_HUMAN Olfactory receptor 52E1 OS=Homo sapiens
           GN=OR52E1 PE=3 SV=1
          Length = 308

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = -3

Query: 284 DP-CYRLMITKGQKKVSMKAIFTHPLWFMIPLLQLVKSL 171
           DP CY L++T     V   AIF  PL F+IP +  +  L
Sbjct: 127 DPLCYTLVLTNKVVSVMALAIFLRPLVFVIPFVLFILRL 165


>sp|A1DB13|CFT1_NEOFI Protein cft1 OS=Neosartorya fischeri (strain
           ATCC 1020 / DSM 3700 / NRRL 181) GN=cft1 PE=3 SV=1
          Length = 1400

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 19/58 (32%), Positives = 27/58 (46%)
 Frame = +1

Query: 4   RSCCLFSNSVFTIAEATPTTLVVAIIVVVNHTHCHLFGFIFGRRWNPDCLIVLHVYKL 177
           RSCCL+ +     +   PT+           THC LF F+     + DC   L+VY+L
Sbjct: 732 RSCCLYWDKAEIFSSTVPTS--------KQRTHCELFLFLL----SIDCR--LYVYRL 775


>sp|O61366|GPRS_DROME Serine-enriched protein OS=Drosophila
           melanogaster GN=gprs PE=2 SV=3
          Length = 1302

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 21/61 (34%), Positives = 24/61 (39%), Gaps = 7/61 (11%)
 Frame = +3

Query: 54  PNHSRCRHHRRRQPYSLPSLR-------LHLREEVEPRLPHCSPRLQTLHQLQEWNHEPK 212
           PN SR  H  R    SLP +R          R   E R P+ +P L     L   N E K
Sbjct: 333 PNSSRQHHRHRHHHQSLPKIRKAKSQSFRTRRSPSERRSPNNAPNLTLNTSLTSGNGEKK 392

Query: 213 R 215
           R
Sbjct: 393 R 393


>sp|Q9NXF7|CD030_HUMAN Uncharacterized protein C4orf30 OS=Homo
           sapiens GN=C4orf30 PE=2 SV=1
          Length = 216

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +3

Query: 105 PSLRLHLREEVEPRLPHCSPRLQTLHQLQEW 197
           PS  +H+  E+  RL HCS  +  L  + EW
Sbjct: 83  PSTPVHILREIGLRLSHCSHCVPKLEPIPEW 113
tr_hit_id B4PAZ2
Definition tr|B4PAZ2|B4PAZ2_DROYA GE13258 OS=Drosophila yakuba
Align length 118
Score (bit) 36.2
E-value 0.85
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917448|Adiantum capillus-veneris mRNA, clone:
YMU001_000100_H11.
         (364 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B4PAZ2|B4PAZ2_DROYA GE13258 OS=Drosophila yakuba GN=GE13258 P...    36   0.85 
tr|B4PL64|B4PL64_DROYA GE25511 OS=Drosophila yakuba GN=GE25511 P...    35   2.5  
tr|Q29FH7|Q29FH7_DROPS GA12184 OS=Drosophila pseudoobscura pseud...    33   5.5  
tr|A3AAQ2|A3AAQ2_ORYSJ Putative uncharacterized protein OS=Oryza...    33   7.2  
tr|Q4D176|Q4D176_TRYCR Putative uncharacterized protein OS=Trypa...    33   9.3  

>tr|B4PAZ2|B4PAZ2_DROYA GE13258 OS=Drosophila yakuba GN=GE13258 PE=4
           SV=1
          Length = 456

 Score = 36.2 bits (82), Expect = 0.85
 Identities = 30/118 (25%), Positives = 50/118 (42%), Gaps = 5/118 (4%)
 Frame = +3

Query: 21  LEFCIHYC*GYPNHSRCRHHRRRQPYSLPSLRLHLREEVEPRLPHCSPRLQTLHQLQEWN 200
           +E  +  C  +  HS   H   ++ Y       +  E  EP+  H  P+   L  +   N
Sbjct: 250 IELGLEECSRHQPHSEYGHEGPQESYQ----PTYGAEVPEPQHTHPKPKQVDLEPVWSIN 305

Query: 201 HEPKRVCKNRFHRHFLLAL-----RNHQTIAWISWRGFLQHVGISPFPS*PPHTLSHH 359
            EPK   ++  H+    A      +N+Q+ + +SWR  +    +SP+ S P H   HH
Sbjct: 306 EEPKHGEQSGNHKAAAYAQSPELKKNYQSSSAVSWRQSVPWEYVSPYQSVPVH---HH 360


>tr|B4PL64|B4PL64_DROYA GE25511 OS=Drosophila yakuba GN=GE25511 PE=4
           SV=1
          Length = 1332

 Score = 34.7 bits (78), Expect = 2.5
 Identities = 21/87 (24%), Positives = 36/87 (41%)
 Frame = +3

Query: 54  PNHSRCRHHRRRQPYSLPSLRLHLREEVEPRLPHCSPRLQTLHQLQEWNHEPKRVCKNRF 233
           PNH    HH    P     L+L  +++ + +  H    L    QLQ   H+     +  +
Sbjct: 642 PNHHHHHHHHHHHP---SQLQLQQQQQQQQQQQHQQQPLHQQQQLQHQQHQQHH--QQHY 696

Query: 234 HRHFLLALRNHQTIAWISWRGFLQHVG 314
            +H +   ++ Q  + IS+RG     G
Sbjct: 697 QQHAIQHQQSQQQASKISYRGIFTTTG 723


>tr|Q29FH7|Q29FH7_DROPS GA12184 OS=Drosophila pseudoobscura
           pseudoobscura GN=GA12184 PE=4 SV=2
          Length = 475

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 17/53 (32%), Positives = 25/53 (47%)
 Frame = +3

Query: 51  YPNHSRCRHHRRRQPYSLPSLRLHLREEVEPRLPHCSPRLQTLHQLQEWNHEP 209
           +P H + +HH    P++ P    H +    P+ PH   +LQ  HQL    H P
Sbjct: 330 HPYHQQHQHH----PHAHPQHPQHSQHSQHPQHPHHQLQLQHQHQLHSHAHHP 378


>tr|A3AAQ2|A3AAQ2_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_007874 PE=4 SV=1
          Length = 181

 Score = 33.1 bits (74), Expect = 7.2
 Identities = 24/93 (25%), Positives = 37/93 (39%)
 Frame = +3

Query: 15  PFLEFCIHYC*GYPNHSRCRHHRRRQPYSLPSLRLHLREEVEPRLPHCSPRLQTLHQLQE 194
           P   FC  YC   P   R R H RR  +   ++R  +R  + PR P    R       +E
Sbjct: 27  PERRFCCPYCPEGPQRGRFRSHLRR--HYRAAVRGMVRGGLAPRAPFAVLRAAPFRDSRE 84

Query: 195 WNHEPKRVCKNRFHRHFLLALRNHQTIAWISWR 293
                +R  + R +R  ++A  +     W + R
Sbjct: 85  ARRRIRRDRRRRLNRGMMVAALSPNHAFWAAHR 117


>tr|Q4D176|Q4D176_TRYCR Putative uncharacterized protein
           OS=Trypanosoma cruzi GN=Tc00.1047053504173.30 PE=4 SV=1
          Length = 226

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 23/73 (31%), Positives = 31/73 (42%)
 Frame = +3

Query: 57  NHSRCRHHRRRQPYSLPSLRLHLREEVEPRLPHCSPRLQTLHQLQEWNHEPKRVCKNRFH 236
           N  R R HR  + Y LP  R  L  +   R+P  +P   T   LQ    E +RV    F+
Sbjct: 87  NRVRTRQHRFPRTYHLPDGRTVLHVDDFRRIPEAAPPPATEEGLQRQREEAERVPSPVFY 146

Query: 237 RHFLLALRNHQTI 275
                 LR+  +I
Sbjct: 147 GRSSYLLRSMSSI 159