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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP917451
Clone id YMU001_000101_A07
Library
Length 160
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000101_A07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CTCCATCTATGCTGCCAGCTTCACTAAGAGCCTCAAGGGACTCTCCAATTACTCCACTGG
TTTCTTTGTACCCCAGACTGTGAACAAGGATTTCTTCTTCACCGTCAGCTATGCTATTCA
GCCTTGCTCCACTTGCAATGTCTCGATATTCCCCGGATTC
■■Homology search results ■■ -
sp_hit_id Q1PDH6
Definition sp|Q1PDH6|LAC16_ARATH Laccase-16 OS=Arabidopsis thaliana
Align length 43
Score (bit) 40.0
E-value 0.004
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917451|Adiantum capillus-veneris mRNA, clone:
YMU001_000101_A07.
         (160 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q1PDH6|LAC16_ARATH Laccase-16 OS=Arabidopsis thaliana GN=LAC1...    40   0.004
sp|O81081|LAC2_ARATH Laccase-2 OS=Arabidopsis thaliana GN=LAC2 P...    37   0.040
sp|O80434|LAC4_ARATH Laccase-4 OS=Arabidopsis thaliana GN=IRX12 ...    36   0.053
sp|Q5N9X2|LAC4_ORYSJ Laccase-4 OS=Oryza sativa subsp. japonica G...    35   0.15 
sp|Q0IQU1|LAC22_ORYSJ Laccase-22 OS=Oryza sativa subsp. japonica...    33   0.45 
sp|Q9FJD5|LAC17_ARATH Laccase-17 OS=Arabidopsis thaliana GN=LAC1...    33   0.45 
sp|Q0DHL2|LAC12_ORYSJ Laccase-12/13 OS=Oryza sativa subsp. japon...    33   0.58 
sp|Q0DHL5|LAC11_ORYSJ Putative laccase-11 OS=Oryza sativa subsp....    32   0.76 
sp|Q10ND7|LAC10_ORYSJ Laccase-10 OS=Oryza sativa subsp. japonica...    31   1.7  
sp|Q8VZA1|LAC11_ARATH Laccase-11 OS=Arabidopsis thaliana GN=LAC1...    30   2.9  
sp|Q8RYM9|LAC2_ORYSJ Laccase-2 OS=Oryza sativa subsp. japonica G...    29   6.4  

>sp|Q1PDH6|LAC16_ARATH Laccase-16 OS=Arabidopsis thaliana GN=LAC16
           PE=2 SV=2
          Length = 566

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 18/43 (41%), Positives = 23/43 (53%)
 Frame = +2

Query: 11  AASFTKSLKGLSNYSTGFFVPQTVNKDFFFTVSYAIQPCSTCN 139
           A  FT+SL+ L++      VP TV    FFTV     PC +CN
Sbjct: 336 ATKFTRSLRSLNSLEYPARVPTTVEHSLFFTVGLGANPCQSCN 378


>sp|O81081|LAC2_ARATH Laccase-2 OS=Arabidopsis thaliana GN=LAC2 PE=2
           SV=1
          Length = 573

 Score = 36.6 bits (83), Expect = 0.040
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = +2

Query: 8   YAASFTKSLKGLSNYSTGFFVPQTVNKDFFFTVSYAIQPC 127
           YAA+FTK  + L++ +    VP+ V+K +FF +     PC
Sbjct: 336 YAANFTKMFRSLASSTFPANVPKVVDKQYFFAIGLGTNPC 375


>sp|O80434|LAC4_ARATH Laccase-4 OS=Arabidopsis thaliana GN=IRX12
           PE=2 SV=2
          Length = 558

 Score = 36.2 bits (82), Expect = 0.053
 Identities = 16/42 (38%), Positives = 23/42 (54%)
 Frame = +2

Query: 11  AASFTKSLKGLSNYSTGFFVPQTVNKDFFFTVSYAIQPCSTC 136
           A +FT SL+ L++      VP T++   FFTV   +  C TC
Sbjct: 328 ANNFTNSLRSLNSKKYPALVPTTIDHHLFFTVGLGLNACPTC 369


>sp|Q5N9X2|LAC4_ORYSJ Laccase-4 OS=Oryza sativa subsp. japonica
           GN=LAC4 PE=2 SV=1
          Length = 579

 Score = 34.7 bits (78), Expect = 0.15
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = +2

Query: 8   YAASFTKSLKGLSNYSTGFFVPQTVNKDFFFTVSYAIQPC 127
           +  +FT  L+ L+       VPQ+V+K FFFTV     PC
Sbjct: 344 FVTNFTDKLRSLATPEYPAAVPQSVDKRFFFTVGLGTLPC 383


>sp|Q0IQU1|LAC22_ORYSJ Laccase-22 OS=Oryza sativa subsp. japonica
           GN=LAC22 PE=2 SV=2
          Length = 564

 Score = 33.1 bits (74), Expect = 0.45
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +2

Query: 14  ASFTKSLKGLSNYSTGFFVPQTVNKDFFFTVSYAIQPCSTC 136
           + FT SL  L++      VPQTV+     TV   + PC +C
Sbjct: 337 SKFTDSLHSLNSKEYPANVPQTVDHSLLLTVGVGVNPCPSC 377


>sp|Q9FJD5|LAC17_ARATH Laccase-17 OS=Arabidopsis thaliana GN=LAC17
           PE=2 SV=1
          Length = 577

 Score = 33.1 bits (74), Expect = 0.45
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = +2

Query: 8   YAASFTKSLKGLSNYSTGFFVPQTVNKDFFFTVSYAIQPCSTCN 139
           +A  F+  L+ L++ +    VP  V++ FFFTV     PC+  N
Sbjct: 339 FATKFSNKLRSLNSKNFPANVPLNVDRKFFFTVGLGTNPCNHKN 382


>sp|Q0DHL2|LAC12_ORYSJ Laccase-12/13 OS=Oryza sativa subsp. japonica
           GN=LAC12 PE=2 SV=1
          Length = 574

 Score = 32.7 bits (73), Expect = 0.58
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +2

Query: 14  ASFTKSLKGLSNYSTGFFVPQTVNKDFFFTVSYAIQPCS 130
           ++FT  L+ L++      VPQ V+  FFFTV     PC+
Sbjct: 341 SNFTAKLRSLASAGYPAAVPQQVDHRFFFTVGLGTHPCA 379


>sp|Q0DHL5|LAC11_ORYSJ Putative laccase-11 OS=Oryza sativa subsp.
           japonica GN=LAC11 PE=5 SV=2
          Length = 540

 Score = 32.3 bits (72), Expect = 0.76
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = +2

Query: 14  ASFTKSLKGLSNYSTGFFVPQTVNKDFFFTVSYAIQPCST 133
           A+F+ S + L++      VP+TV++ FFF V     PC +
Sbjct: 304 ANFSASFRSLASAQYPARVPRTVDRHFFFAVGLGADPCQS 343


>sp|Q10ND7|LAC10_ORYSJ Laccase-10 OS=Oryza sativa subsp. japonica
           GN=LAC10 PE=2 SV=1
          Length = 578

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 16/44 (36%), Positives = 21/44 (47%)
 Frame = +2

Query: 8   YAASFTKSLKGLSNYSTGFFVPQTVNKDFFFTVSYAIQPCSTCN 139
           +AA F   L+ L+       VP+ V+K FFF V     PC   N
Sbjct: 340 FAAGFAAKLRSLACPDYPSNVPRRVDKPFFFAVGLGTTPCPGSN 383


>sp|Q8VZA1|LAC11_ARATH Laccase-11 OS=Arabidopsis thaliana GN=LAC11
           PE=2 SV=1
          Length = 557

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = +2

Query: 8   YAASFTKSLKGLSNYSTGFFVPQTVNKDFFFTVSYAIQPCSTC 136
           +A  +   LK L+  +    VP  V++  F+T+   I  C TC
Sbjct: 327 FALDYNGKLKSLNTPNFPALVPLKVDRRLFYTIGLGINACPTC 369
tr_hit_id O24042
Definition tr|O24042|O24042_LIRTU Laccase OS=Liriodendron tulipifera
Align length 40
Score (bit) 45.8
E-value 0.001
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917451|Adiantum capillus-veneris mRNA, clone:
YMU001_000101_A07.
         (160 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|O24042|O24042_LIRTU Laccase OS=Liriodendron tulipifera GN=LAC...    46   0.001
tr|Q9AUI6|Q9AUI6_PINTA Laccase OS=Pinus taeda GN=Lac1 PE=2 SV=1        44   0.004
tr|Q9AUH9|Q9AUH9_PINTA Laccase OS=Pinus taeda GN=Lac8 PE=2 SV=1        43   0.007
tr|O24044|O24044_LIRTU Laccase OS=Liriodendron tulipifera GN=LAC...    43   0.009
tr|O24043|O24043_LIRTU Laccase OS=Liriodendron tulipifera GN=LAC...    43   0.009
tr|O24041|O24041_LIRTU Laccase OS=Liriodendron tulipifera GN=LAC...    42   0.020
tr|B2BXX9|B2BXX9_9BRAS Putative uncharacterized protein OS=Capse...    42   0.020
tr|Q9ZQW2|Q9ZQW2_POPTR Laccase OS=Populus trichocarpa GN=lac110 ...    41   0.026
tr|A7PIP8|A7PIP8_VITVI Chromosome chr13 scaffold_17, whole genom...    41   0.026
tr|A5AEC2|A5AEC2_VITVI Putative uncharacterized protein OS=Vitis...    41   0.034
tr|Q693D3|Q693D3_BRANA Laccase-like multicopper oxidase 19 (Frag...    40   0.058
tr|A7PNP8|A7PNP8_VITVI Chromosome chr8 scaffold_23, whole genome...    40   0.058
tr|A7PNP6|A7PNP6_VITVI Chromosome chr8 scaffold_23, whole genome...    40   0.058
tr|A7PIS0|A7PIS0_VITVI Chromosome chr13 scaffold_17, whole genom...    40   0.058
tr|A5C7L3|A5C7L3_VITVI Putative uncharacterized protein OS=Vitis...    40   0.058
tr|A7PIS2|A7PIS2_VITVI Chromosome chr13 scaffold_17, whole genom...    40   0.076
tr|A7PIS1|A7PIS1_VITVI Chromosome chr13 scaffold_17, whole genom...    40   0.076
tr|A5ACW6|A5ACW6_VITVI Putative uncharacterized protein OS=Vitis...    40   0.076
tr|Q9ZQW5|Q9ZQW5_POPTR Laccase (Fragment) OS=Populus trichocarpa...    39   0.099
tr|Q9FSD0|Q9FSD0_POPTR Laccase (Fragment) OS=Populus trichocarpa...    39   0.099
tr|Q9AUI2|Q9AUI2_PINTA Laccase OS=Pinus taeda GN=Lac5 PE=2 SV=1        39   0.13 
tr|Q9AUI1|Q9AUI1_PINTA Laccase OS=Pinus taeda GN=Lac6 PE=2 SV=1        39   0.13 
tr|A7PIP9|A7PIP9_VITVI Chromosome chr13 scaffold_17, whole genom...    39   0.13 
tr|Q9AUI0|Q9AUI0_PINTA Laccase OS=Pinus taeda GN=Lac7 PE=2 SV=1        39   0.17 
tr|A7PNP7|A7PNP7_VITVI Chromosome chr8 scaffold_23, whole genome...    39   0.17 
tr|B6REK9|B6REK9_9BRAS Putative laccase OS=Boechera divaricarpa ...    38   0.22 
tr|P93368|P93368_TOBAC Diphenol oxidase (Fragment) OS=Nicotiana ...    38   0.29 
tr|Q9AUI4|Q9AUI4_PINTA Laccase OS=Pinus taeda GN=Lac3 PE=2 SV=1        37   0.38 
tr|A7NZA2|A7NZA2_VITVI Chromosome chr6 scaffold_3, whole genome ...    37   0.49 
tr|A5AKT5|A5AKT5_VITVI Putative uncharacterized protein OS=Vitis...    37   0.49 

>tr|O24042|O24042_LIRTU Laccase OS=Liriodendron tulipifera GN=LAC2-2
           PE=2 SV=1
          Length = 585

 Score = 45.8 bits (107), Expect = 0.001
 Identities = 20/40 (50%), Positives = 27/40 (67%)
 Frame = +2

Query: 8   YAASFTKSLKGLSNYSTGFFVPQTVNKDFFFTVSYAIQPC 127
           +AA++TK L+ L+N      VPQT+NK FFFTV    +PC
Sbjct: 350 FAANYTKRLRSLANAQFPANVPQTINKSFFFTVGLGSEPC 389


>tr|Q9AUI6|Q9AUI6_PINTA Laccase OS=Pinus taeda GN=Lac1 PE=2 SV=1
          Length = 586

 Score = 43.9 bits (102), Expect = 0.004
 Identities = 20/40 (50%), Positives = 25/40 (62%)
 Frame = +2

Query: 8   YAASFTKSLKGLSNYSTGFFVPQTVNKDFFFTVSYAIQPC 127
           +A +FT  LK L+N      VPQTV+K F+FTVS    PC
Sbjct: 350 FATNFTLKLKSLANAQYPALVPQTVDKKFYFTVSLGFNPC 389


>tr|Q9AUH9|Q9AUH9_PINTA Laccase OS=Pinus taeda GN=Lac8 PE=2 SV=1
          Length = 577

 Score = 43.1 bits (100), Expect = 0.007
 Identities = 18/44 (40%), Positives = 27/44 (61%)
 Frame = +2

Query: 8   YAASFTKSLKGLSNYSTGFFVPQTVNKDFFFTVSYAIQPCSTCN 139
           +A SFT  L+ L++      VPQT++++ FF V  A + C TCN
Sbjct: 348 FATSFTSKLRSLNSVQFPAKVPQTIDRNLFFAVGLATESCQTCN 391


>tr|O24044|O24044_LIRTU Laccase OS=Liriodendron tulipifera GN=LAC2-4
           PE=2 SV=1
          Length = 585

 Score = 42.7 bits (99), Expect = 0.009
 Identities = 19/40 (47%), Positives = 27/40 (67%)
 Frame = +2

Query: 8   YAASFTKSLKGLSNYSTGFFVPQTVNKDFFFTVSYAIQPC 127
           +AA++T+ L+ L+N      VPQTV++ FFFTV    QPC
Sbjct: 350 FAANYTRRLRSLANAQFPANVPQTVDRRFFFTVGLGTQPC 389


>tr|O24043|O24043_LIRTU Laccase OS=Liriodendron tulipifera GN=LAC2-3
           PE=2 SV=1
          Length = 586

 Score = 42.7 bits (99), Expect = 0.009
 Identities = 19/40 (47%), Positives = 27/40 (67%)
 Frame = +2

Query: 8   YAASFTKSLKGLSNYSTGFFVPQTVNKDFFFTVSYAIQPC 127
           +AA++T+ L+ L+N      VPQTV++ FFFTV    QPC
Sbjct: 351 FAANYTRRLRSLANAKFPANVPQTVDRRFFFTVGLGTQPC 390


>tr|O24041|O24041_LIRTU Laccase OS=Liriodendron tulipifera GN=LAC2-1
           PE=2 SV=1
          Length = 570

 Score = 41.6 bits (96), Expect = 0.020
 Identities = 18/40 (45%), Positives = 26/40 (65%)
 Frame = +2

Query: 8   YAASFTKSLKGLSNYSTGFFVPQTVNKDFFFTVSYAIQPC 127
           YAA +++ L+ L+N      VPQTV+K FFFT+  +  PC
Sbjct: 335 YAAKYSQRLRSLANAQFPANVPQTVDKHFFFTIGLSADPC 374


>tr|B2BXX9|B2BXX9_9BRAS Putative uncharacterized protein OS=Capsella
           rubella PE=4 SV=1
          Length = 573

 Score = 41.6 bits (96), Expect = 0.020
 Identities = 19/40 (47%), Positives = 26/40 (65%)
 Frame = +2

Query: 8   YAASFTKSLKGLSNYSTGFFVPQTVNKDFFFTVSYAIQPC 127
           YAA+FTK  + L++ +    VP+TV+K FFFTV     PC
Sbjct: 336 YAANFTKMFRSLASSTFPANVPKTVDKKFFFTVGLGTNPC 375


>tr|Q9ZQW2|Q9ZQW2_POPTR Laccase OS=Populus trichocarpa GN=lac110
           PE=2 SV=1
          Length = 580

 Score = 41.2 bits (95), Expect = 0.026
 Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
 Frame = +2

Query: 8   YAASFTKSLKGLSNYSTGFFVPQTVNKDFFFTVSYAIQPC---STC 136
           + A+FTK  + L+N      VPQTV++ FFFTV     PC   +TC
Sbjct: 344 FVANFTKKFRSLANAKFPANVPQTVDRKFFFTVGLGTNPCPKNTTC 389


>tr|A7PIP8|A7PIP8_VITVI Chromosome chr13 scaffold_17, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00018427001
           PE=4 SV=1
          Length = 584

 Score = 41.2 bits (95), Expect = 0.026
 Identities = 19/40 (47%), Positives = 25/40 (62%)
 Frame = +2

Query: 8   YAASFTKSLKGLSNYSTGFFVPQTVNKDFFFTVSYAIQPC 127
           +AA+FT+ L+ L+N      VPQ V+K FFFTV     PC
Sbjct: 348 FAANFTRKLRSLANTQFPANVPQKVDKRFFFTVGLGTNPC 387


>tr|A5AEC2|A5AEC2_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_033042 PE=4 SV=1
          Length = 547

 Score = 40.8 bits (94), Expect = 0.034
 Identities = 20/42 (47%), Positives = 25/42 (59%)
 Frame = +2

Query: 2   SIYAASFTKSLKGLSNYSTGFFVPQTVNKDFFFTVSYAIQPC 127
           S  AA+FT+ L+ L+N      VPQ V+K FFFTV     PC
Sbjct: 309 STVAANFTRKLRSLANTQFPANVPQKVDKRFFFTVGLGTNPC 350