BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917452|Adiantum capillus-veneris mRNA, clone:
YMU001_000101_A08.
         (355 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9U357|PEN2_CAEEL Gamma-secretase subunit pen-2 OS=Caenorhabd...    31   1.7  
sp|O44199|RAD50_CAEEL DNA repair protein rad-50 OS=Caenorhabditi...    30   3.7  
sp|Q5T9C2|F102A_HUMAN Protein FAM102A OS=Homo sapiens GN=FAM102A...    30   3.8  

>sp|Q9U357|PEN2_CAEEL Gamma-secretase subunit pen-2
           OS=Caenorhabditis elegans GN=pen-2 PE=2 SV=1
          Length = 101

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
 Frame = +1

Query: 16  FIIHRCSLPVAWSV-----FSDLFKKGSNPHECKALR*HVFSLPGQKYW 147
           F+I  C LP+ W V     FSD F K  N H  +  +  + S+ G  +W
Sbjct: 19  FLIGACFLPLVWIVNTFWFFSDAFCKPINAHRRQIRKYVIASIVGSIFW 67


>sp|O44199|RAD50_CAEEL DNA repair protein rad-50 OS=Caenorhabditis
           elegans GN=rad-50 PE=2 SV=1
          Length = 1298

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 22/59 (37%), Positives = 24/59 (40%)
 Frame = -3

Query: 230 CGCEGVRSSIKLEH*RKPLKGVRVV*APQYFCPGKLNTCYLRALHSCGLLPFLKRSEKT 54
           C CE    S KLE+ RK LK  R   AP       L   Y+    S G  P   R  KT
Sbjct: 618 CSCEAEEVSEKLENLRKRLKKARKDLAP-LSAKSNLYDSYIEESKSSGCCPLCDRDFKT 675


>sp|Q5T9C2|F102A_HUMAN Protein FAM102A OS=Homo sapiens GN=FAM102A
           PE=2 SV=2
          Length = 384

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 16/43 (37%), Positives = 24/43 (55%)
 Frame = +2

Query: 227 HSRSIDLAPVFQTSSQLSC*SATNALGMTMEAPPNLTQNSHRP 355
           HSRS  L+ +    +  +  SA+  LGMT+E P   ++  HRP
Sbjct: 246 HSRSSSLSDLTHRRNTSTSSSASGGLGMTVEGPEG-SEREHRP 287

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917452|Adiantum capillus-veneris mRNA, clone:
YMU001_000101_A08.
         (355 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B5EHG1|B5EHG1_GEOBB Cytochrome C family protein OS=Geobacter ...    34   3.2  
tr|A8N6E8|A8N6E8_COPC7 Predicted protein OS=Coprinopsis cinerea ...    33   9.1  

>tr|B5EHG1|B5EHG1_GEOBB Cytochrome C family protein OS=Geobacter
           bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622)
           GN=Gbem_1152 PE=3 SV=1
          Length = 1009

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
 Frame = +2

Query: 107 SGNMCLACQDRS---IGGPKPLLLPLRVSFNALA*WNYEHLHNHSRSIDLAPVFQTSSQL 277
           +G  CL+C DR+   IGG   L+ PL VSFNA       + HN++  +  A     +S +
Sbjct: 719 AGKGCLSCHDRNQRHIGGAGRLIAPLTVSFNA----ECSYCHNNAAVVQ-ANHLNMASHV 773

Query: 278 SC*SATNALGMTMEAPPNLTQN 343
           +      A+  T    P+ T N
Sbjct: 774 TTKGGDAAMACTTCHDPHGTSN 795


>tr|A8N6E8|A8N6E8_COPC7 Predicted protein OS=Coprinopsis cinerea
           (strain Okayama-7 / 130 / FGSC 9003) GN=CC1G_02052 PE=4
           SV=1
          Length = 107

 Score = 32.7 bits (73), Expect = 9.1
 Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = -3

Query: 182 KPLKGVRVV*APQYFCPGKLNTCY-LRALHSCGLLPFLKRSEKTDHATGR 36
           KP     VV AP    PG L   Y +R  H  G+ P+L +S  ++H TGR
Sbjct: 8   KPQLHTYVVWAPDCKDPGALERRYSVREQHLAGVAPYLNKSICSEHETGR 57