BP917472 |
Clone id |
YMU001_000101_C05 |
Library |
YMU01 |
Length |
345 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000101_C05. |
Accession |
BP917472 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1823Contig1 |
Sequence |
TTGTTGAACAAGGTGAGTACATTGCATTCACATCAGTAAAGTAATTCCATGCTCCTTTAC CGAGTCTACGACAGCTAATAGTTTCCCCTCCAGCTTTTCATTCTTACGGGTGTAATACAA GGATGTAAACACATCAGCCTCCTTGGCACGCTCAGCCAGTACTTGGCCGACAATCCGACA GGCATTCAAGTCGCACCTTGACTTGATCACTGATCGCAAGTCCTTAGAATTGGTGCTTGC CACAGCAACAACCTTGTTGGACATGCGATGCATAATGCTTGCGTGGATGTACTTCTTGGA AATGAATACATCAATGGTAAATGGGAGCATGTATGCCTCTGTTCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
A9BG02 |
Definition |
sp|A9BG02|RL18_PETMO 50S ribosomal protein L18 OS=Petrotoga mobilis (strain DSM 10674 / SJ95) |
Align length |
91 |
Score (bit) |
58.5 |
E-value |
1.0e-08 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SVY5 |
Definition |
tr|A9SVY5|A9SVY5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
104 |
Score (bit) |
128.0 |
E-value |
2.0e-28 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917472|Adiantum capillus-veneris mRNA, clone: YMU001_000101_C05. (345 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SVY5|A9SVY5_PHYPA Predicted protein OS=Physcomitrella paten... 128 2e-28 tr|A9TM44|A9TM44_PHYPA Predicted protein (Fragment) OS=Physcomit... 125 1e-27 tr|B6TUI1|B6TUI1_MAIZE Structural constituent of ribosome OS=Zea... 125 1e-27 tr|A7QDQ1|A7QDQ1_VITVI Chromosome chr15 scaffold_82, whole genom... 123 4e-27 tr|Q6ZGY5|Q6ZGY5_ORYSJ cDNA clone:J023132I06, full insert sequen... 123 5e-27 tr|A2X8G7|A2X8G7_ORYSI Putative uncharacterized protein OS=Oryza... 123 5e-27 tr|Q8GW22|Q8GW22_ARATH Putative uncharacterized protein (At1g088... 122 7e-27 tr|A9NZ46|A9NZ46_PICSI Putative uncharacterized protein OS=Picea... 121 2e-26 tr|Q9LJX6|Q9LJX6_ARATH Genomic DNA, chromosome 3, P1 clone:MAL21... 119 6e-26 tr|A7QX13|A7QX13_VITVI Chromosome chr14 scaffold_211, whole geno... 119 6e-26 tr|Q8SB98|Q8SB98_ORYSA Putative uncharacterized protein OSJNBa00... 118 1e-25 tr|Q7XC72|Q7XC72_ORYSJ Os10g0559900 protein OS=Oryza sativa subs... 118 1e-25 tr|A2ZA70|A2ZA70_ORYSI Putative uncharacterized protein OS=Oryza... 118 1e-25 tr|B4FUY5|B4FUY5_MAIZE Putative uncharacterized protein OS=Zea m... 115 1e-24 tr|B8LMX3|B8LMX3_PICSI Putative uncharacterized protein OS=Picea... 103 4e-21 tr|A7NWN3|A7NWN3_VITVI Chromosome chr5 scaffold_2, whole genome ... 90 6e-17 tr|Q9LJA1|Q9LJA1_ARATH Arabidopsis thaliana genomic DNA, chromos... 86 9e-16 tr|Q8LNU7|Q8LNU7_ORYSJ Putative uncharacterized protein OSJNBa00... 81 2e-14 tr|Q337J7|Q337J7_ORYSJ Os10g0484400 protein OS=Oryza sativa subs... 81 2e-14 tr|B8BHJ8|B8BHJ8_ORYSI Putative uncharacterized protein OS=Oryza... 81 2e-14 tr|B6TPY3|B6TPY3_MAIZE Putative uncharacterized protein OS=Zea m... 76 7e-13 tr|A9S9N7|A9S9N7_PHYPA Predicted protein OS=Physcomitrella paten... 70 7e-11 tr|Q0DYI9|Q0DYI9_ORYSJ Os02g0689700 protein (Fragment) OS=Oryza ... 66 1e-09 tr|Q8LDK5|Q8LDK5_ARATH Putative uncharacterized protein (At5g278... 65 2e-09 tr|A5B7I1|A5B7I1_VITVI Putative uncharacterized protein OS=Vitis... 64 4e-09 tr|Q1EHT9|Q1EHT9_ORYSJ cDNA clone:001-122-F11, full insert seque... 63 8e-09 tr|A2ZRE8|A2ZRE8_ORYSJ Putative uncharacterized protein OS=Oryza... 63 8e-09 tr|A2XXJ6|A2XXJ6_ORYSI Putative uncharacterized protein OS=Oryza... 62 1e-08 tr|B6SMG7|B6SMG7_MAIZE 50S ribosomal protein L18 OS=Zea mays PE=... 61 3e-08 tr|B5ZYV1|B5ZYV1_RHILW Ribosomal protein L18 OS=Rhizobium legumi... 59 2e-07
>tr|A9SVY5|A9SVY5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_216270 PE=4 SV=1 Length = 196
Score = 128 bits (321), Expect = 2e-28 Identities = 59/104 (56%), Positives = 80/104 (76%) Frame = -1
Query: 345 RTEAYMLPFTIDVFISKKYIHASIMHRMSNKVVAVASTNSKDLRSVIKSRCDLNACRIVG 166 RTE Y PF +DVFIS KY+HA +MHR+++ VV+VA+TN+KDLR + S D NACR++G Sbjct: 93 RTEKYFKPFILDVFISSKYVHAKVMHRVTSSVVSVATTNAKDLRLSLPSLSDANACRLIG 152
Query: 165 QVLAERAKEADVFTSLYYTRKNEKLEGKLLAVVDSVKEHGITLL 34 Q++AER+ E D++ + RKNEKLEGKL V+DS EHG+TL+ Sbjct: 153 QLIAERSIEQDIYAVAFDLRKNEKLEGKLAIVIDSAIEHGLTLV 196
>tr|A9TM44|A9TM44_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_48641 PE=4 SV=1 Length = 118
Score = 125 bits (314), Expect = 1e-27 Identities = 59/103 (57%), Positives = 82/103 (79%) Frame = -1
Query: 345 RTEAYMLPFTIDVFISKKYIHASIMHRMSNKVVAVASTNSKDLRSVIKSRCDLNACRIVG 166 RTE + PF++DVF+S KYIHAS+MHR+++KVVAV STN+K+ R+ +KS D AC++VG Sbjct: 16 RTEKCLRPFSLDVFLSGKYIHASVMHRVTSKVVAVCSTNAKEFRNNLKSYKDFTACKVVG 75
Query: 165 QVLAERAKEADVFTSLYYTRKNEKLEGKLLAVVDSVKEHGITL 37 + LA+RAKEADVFT +Y RK EK EG+L AVV ++++ GI + Sbjct: 76 ETLAQRAKEADVFTVVYEPRKGEKFEGRLAAVVHTIEDSGINV 118
>tr|B6TUI1|B6TUI1_MAIZE Structural constituent of ribosome OS=Zea mays PE=2 SV=1 Length = 189
Score = 125 bits (313), Expect = 1e-27 Identities = 56/101 (55%), Positives = 80/101 (79%) Frame = -1
Query: 345 RTEAYMLPFTIDVFISKKYIHASIMHRMSNKVVAVASTNSKDLRSVIKSRCDLNACRIVG 166 RT+ YM PF ++VF SK+++HA +MHR ++KV+AVA+TNSKDLR + S D NACR +G Sbjct: 86 RTDMYMRPFLLNVFFSKRFVHAKVMHRGTSKVIAVATTNSKDLRLTLPSLVDDNACRTIG 145
Query: 165 QVLAERAKEADVFTSLYYTRKNEKLEGKLLAVVDSVKEHGI 43 +++AER+ +ADVF Y +KNE++EGKL V+D++KEHGI Sbjct: 146 RLIAERSMDADVFAMAYEPKKNERIEGKLGIVIDTIKEHGI 186
>tr|A7QDQ1|A7QDQ1_VITVI Chromosome chr15 scaffold_82, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00036689001 PE=4 SV=1 Length = 183
Score = 123 bits (309), Expect = 4e-27 Identities = 55/101 (54%), Positives = 82/101 (81%) Frame = -1
Query: 345 RTEAYMLPFTIDVFISKKYIHASIMHRMSNKVVAVASTNSKDLRSVIKSRCDLNACRIVG 166 +T+ YM PF ++VF SK++IHA +MHR ++KV++VA+TNSKDLR+ + S D NACR++G Sbjct: 80 KTDMYMRPFLLNVFFSKRFIHAKVMHRPTSKVISVATTNSKDLRNTLSSLTDHNACRVIG 139
Query: 165 QVLAERAKEADVFTSLYYTRKNEKLEGKLLAVVDSVKEHGI 43 +++AER+ EADVF Y RK+E++EGKL V+D++KE+GI Sbjct: 140 KLIAERSMEADVFAMSYEPRKDERIEGKLGIVLDTIKENGI 180
>tr|Q6ZGY5|Q6ZGY5_ORYSJ cDNA clone:J023132I06, full insert sequence OS=Oryza sativa subsp. japonica GN=OJ1743_B12.26 PE=2 SV=1 Length = 181
Score = 123 bits (308), Expect = 5e-27 Identities = 54/101 (53%), Positives = 81/101 (80%) Frame = -1
Query: 345 RTEAYMLPFTIDVFISKKYIHASIMHRMSNKVVAVASTNSKDLRSVIKSRCDLNACRIVG 166 RT+ YM PF ++VF SK+++HA ++HR ++KV++VASTN+KDLR+ + S D NACR +G Sbjct: 78 RTDMYMRPFLLNVFFSKRFVHAKVVHRGTSKVISVASTNAKDLRTTLPSLVDDNACRTIG 137
Query: 165 QVLAERAKEADVFTSLYYTRKNEKLEGKLLAVVDSVKEHGI 43 +++AER+ +ADVF Y +KNE++EGKL V+D++KEHGI Sbjct: 138 RLIAERSMDADVFAMSYEPKKNERIEGKLGIVIDTIKEHGI 178
>tr|A2X8G7|A2X8G7_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_08528 PE=4 SV=1 Length = 181
Score = 123 bits (308), Expect = 5e-27 Identities = 54/101 (53%), Positives = 81/101 (80%) Frame = -1
Query: 345 RTEAYMLPFTIDVFISKKYIHASIMHRMSNKVVAVASTNSKDLRSVIKSRCDLNACRIVG 166 RT+ YM PF ++VF SK+++HA ++HR ++KV++VASTN+KDLR+ + S D NACR +G Sbjct: 78 RTDMYMRPFLLNVFFSKRFVHAKVVHRGTSKVISVASTNAKDLRTTLPSLVDDNACRTIG 137
Query: 165 QVLAERAKEADVFTSLYYTRKNEKLEGKLLAVVDSVKEHGI 43 +++AER+ +ADVF Y +KNE++EGKL V+D++KEHGI Sbjct: 138 RLIAERSMDADVFAMSYEPKKNERIEGKLGIVIDTIKEHGI 178
>tr|Q8GW22|Q8GW22_ARATH Putative uncharacterized protein (At1g08850) OS=Arabidopsis thaliana GN=At1g08845 PE=2 SV=1 Length = 189
Score = 122 bits (307), Expect = 7e-27 Identities = 57/101 (56%), Positives = 82/101 (81%) Frame = -1
Query: 345 RTEAYMLPFTIDVFISKKYIHASIMHRMSNKVVAVASTNSKDLRSVIKSRCDLNACRIVG 166 RT AYM PFT+DVFISK+++ AS+ HR++ + VAVA TNSKD+++V++SRCD+ AC +G Sbjct: 82 RTVAYMEPFTLDVFISKRFVSASLTHRVTCRQVAVAGTNSKDVKAVLRSRCDIPACMSIG 141
Query: 165 QVLAERAKEADVFTSLYYTRKNEKLEGKLLAVVDSVKEHGI 43 ++L+ERAKEADV+T+ Y R +K EGK+ AVV S+ ++GI Sbjct: 142 RILSERAKEADVYTASYTPRDQDKFEGKIRAVVQSLIDNGI 182
>tr|A9NZ46|A9NZ46_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 186
Score = 121 bits (303), Expect = 2e-26 Identities = 55/103 (53%), Positives = 84/103 (81%) Frame = -1
Query: 345 RTEAYMLPFTIDVFISKKYIHASIMHRMSNKVVAVASTNSKDLRSVIKSRCDLNACRIVG 166 RT AYM PFT+DVFISK+++ ASI HR+++K VAVA TNSKD+++ ++S+ D+ AC +G Sbjct: 79 RTIAYMQPFTLDVFISKRFVSASITHRVTSKQVAVAGTNSKDIKAALRSKSDIPACLAIG 138
Query: 165 QVLAERAKEADVFTSLYYTRKNEKLEGKLLAVVDSVKEHGITL 37 ++LAER++EADV+T++Y R+ +K EGK+ AVV S+ ++GI + Sbjct: 139 RILAERSREADVYTAVYTPRERDKFEGKIRAVVQSLIDNGIDI 181
>tr|Q9LJX6|Q9LJX6_ARATH Genomic DNA, chromosome 3, P1 clone:MAL21 (Putative uncharacterized protein At3g20230) (Putative uncharacterized protein) OS=Arabidopsis thaliana GN=At3g20230 PE=2 SV=1 Length = 187
Score = 119 bits (299), Expect = 6e-26 Identities = 53/101 (52%), Positives = 80/101 (79%) Frame = -1
Query: 345 RTEAYMLPFTIDVFISKKYIHASIMHRMSNKVVAVASTNSKDLRSVIKSRCDLNACRIVG 166 RT+ YM PF ++VF S+K+IHA +MHR ++KV++VA+TN++D+R+ I S D ACR++G Sbjct: 83 RTDMYMRPFLLNVFFSRKFIHAKVMHRPTSKVISVATTNARDIRTNIPSLVDNEACRLIG 142
Query: 165 QVLAERAKEADVFTSLYYTRKNEKLEGKLLAVVDSVKEHGI 43 +++AER+ EADV+ Y RK E++EGKL V+D++KEHGI Sbjct: 143 KLIAERSMEADVYAVSYEPRKGERIEGKLGIVIDTIKEHGI 183
>tr|A7QX13|A7QX13_VITVI Chromosome chr14 scaffold_211, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00008905001 PE=4 SV=1 Length = 212
Score = 119 bits (299), Expect = 6e-26 Identities = 56/101 (55%), Positives = 81/101 (80%) Frame = -1
Query: 345 RTEAYMLPFTIDVFISKKYIHASIMHRMSNKVVAVASTNSKDLRSVIKSRCDLNACRIVG 166 RT AYM PFT+DV ISK+++ AS+ HR+++K VAVA TNSKD+++V+KSR D+ AC +G Sbjct: 105 RTGAYMEPFTLDVLISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLKSRSDIPACLAIG 164
Query: 165 QVLAERAKEADVFTSLYYTRKNEKLEGKLLAVVDSVKEHGI 43 ++L+ERA+EADV+T+ Y R +K EGK+ AVV S+ ++GI Sbjct: 165 RILSERAREADVYTASYTPRDRDKFEGKIRAVVQSLIDNGI 205
|