BP917478
Clone id YMU001_000101_C11
Library
Length 359
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000101_C11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
ATCTGAACATCATGATGGCGTACGTGCCTGGCTGAAGCATTATCCCAATATGTCAAATCA
AAATTCAACATCATCAGAGCTCTCCTGCATTGATTTGTGTGTGCGAGGGAGTAGCATAGA
GCGAGATCACCCTCAGCACAAACAATAACTGGATCTGAACACAGGGCCTACGTACCTACA
CGGTCGCACCTGGCGTTTGATGTGAGGCACCGCTGGTAGTAACGCATTCCAAATGATTGT
CTACTGAGCACCTTGCTTGACTGCAAGCTCCAACTTTATTCATGTCTTCATCACTCCCAC
TCCTTATAAAACTTCTAGATGTCGTCGGAACATCATTGTCCTTTCCTCCATTGTCAGGG
■■Homology search results ■■ -
sp_hit_id Q5BK01
Definition sp|Q5BK01|CF186_RAT UPF0624 protein C6orf186 homolog OS=Rattus norvegicus
Align length 64
Score (bit) 31.2
E-value 1.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917478|Adiantum capillus-veneris mRNA, clone:
YMU001_000101_C11.
(359 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q5BK01|CF186_RAT UPF0624 protein C6orf186 homolog OS=Rattus n... 31 1.7
sp|P74466|CLPR_SYNY3 Putative ATP-dependent Clp protease proteol... 30 2.9
sp|P46590|ALS1_CANAL Agglutinin-like protein 1 OS=Candida albica... 29 6.5

>sp|Q5BK01|CF186_RAT UPF0624 protein C6orf186 homolog OS=Rattus
norvegicus PE=2 SV=1
Length = 363

Score = 31.2 bits (69), Expect = 1.7
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Frame = -1

Query: 203 TSNARCDRVGT*ALCSD------PVIVCAEGDLALCYSLAHTNQCRRALMMLNFDLTYWD 42
T+ CDR+GT ++ +D P +VC + L + + T QCR + L D T+++
Sbjct: 134 TTQIACDRMGTNSVATDSGPALKPWLVCLDDRFGLAHQI-RTKQCRLYSLGLGSDDTHFE 192

Query: 41 NASA 30
+ A
Sbjct: 193 VSMA 196


>sp|P74466|CLPR_SYNY3 Putative ATP-dependent Clp protease
proteolytic subunit-like OS=Synechocystis sp. (strain
PCC 6803) GN=clpR PE=3 SV=1
Length = 225

Score = 30.4 bits (67), Expect = 2.9
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +2

Query: 17 GVRAWLKHYPNMSNQNSTSSELSCIDLCVRGSSIERDHPQHKQ*LDLNTGPT 172
G RA L H + NQN T ++ D+ +R + + + L LNTG T
Sbjct: 132 GYRASLPHATIVLNQNRTGAQGQATDIQIRAKEVISNKQTMLEILSLNTGQT 183


>sp|P46590|ALS1_CANAL Agglutinin-like protein 1 OS=Candida albicans
GN=ALS1 PE=4 SV=1
Length = 1260

Score = 29.3 bits (64), Expect = 6.5
Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 12/70 (17%)
Frame = -2

Query: 355 DNGGKDNDVPTTSRSFIRSGSDEDMNKVGACSQARCSV------------DNHLECVTTS 212
DN N VPT + S + S S+ED NK G+ A S+ +E TTS
Sbjct: 1044 DNTSSTNPVPTVATSTLASASEED-NKSGSHESASTSLKPSMGENSGLTTSTEIEATTTS 1102

Query: 211 GASHQTPGAT 182
+P +
Sbjct: 1103 PTEAPSPAVS 1112


tr_hit_id B0CZZ2
Definition tr|B0CZZ2|B0CZZ2_LACBS Predicted protein OS=Laccaria bicolor (strain S238N-H82)
Align length 53
Score (bit) 40.0
E-value 0.059
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917478|Adiantum capillus-veneris mRNA, clone:
YMU001_000101_C11.
(359 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B0CZZ2|B0CZZ2_LACBS Predicted protein OS=Laccaria bicolor (st... 40 0.059

>tr|B0CZZ2|B0CZZ2_LACBS Predicted protein OS=Laccaria bicolor
(strain S238N-H82) GN=LACBIDRAFT_311427 PE=4 SV=1
Length = 319

Score = 40.0 bits (92), Expect = 0.059
Identities = 23/53 (43%), Positives = 28/53 (52%)
Frame = +3

Query: 189 PGV*CEAPLVVTHSK*LSTEHLA*LQAPTLFMSSSLPLLIKLLDVVGTSLSFP 347
PG+ CE P+ HS S + L L LF S SLP + L + GTSLS P
Sbjct: 174 PGIHCEGPISHAHS---SVDSLVNLNGSPLFHSQSLPFISPSLPIPGTSLSVP 223