BP917481
Clone id YMU001_000101_D03
Library
Length 422
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000101_D03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CCATGATGCAAGAGTGAATGCGGAAGAACGCAGAGGTTGGTGTGATGAGCAGAAGCTTCT
GCCAGCTTGATGGGATGGGATTGCTTGAAACCCTTAAAACGAAGGTAACTCGAAGAGGCA
GTGGGCAATTTCATAATCTAGATATATAGTAGGGGCTGTAGCTACAGTTGGCTTCCTGGG
AATGTCAGAAAGACTTTGAAGTGATTTGCAGATGTTGCTTAATTTGTGGAAGACAGATTG
TTCTGTTGCCGTTTTTCGACTTACAAACAACATAAGCATTGGTGATGGCAGTGGTCATAG
GTTCCTATGGAGTGTTAGCAACTAAGGAGAAAAGATGATGGCTAAGGGTTCTGCTGTGCT
TAACAGTGAAAAAGACTTCTGAGTGCCCACATTCCATTGATCGAGCCAAAGTAGAGCCAT
GC
■■Homology search results ■■ -
sp_hit_id Q58DB6
Definition sp|Q58DB6|EYA2_BOVIN Eyes absent homolog 2 OS=Bos taurus
Align length 40
Score (bit) 30.8
E-value 2.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917481|Adiantum capillus-veneris mRNA, clone:
YMU001_000101_D03.
(422 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q58DB6|EYA2_BOVIN Eyes absent homolog 2 OS=Bos taurus GN=EYA2... 31 2.3
sp|P14000|ARS_HEMPU Arylsulfatase OS=Hemicentrotus pulcherrimus ... 30 5.0
sp|Q6BMI2|HIR3_DEBHA Histone transcription regulator 3 homolog O... 29 6.6
sp|P33306|BCK2_YEAST Protein BCK2 OS=Saccharomyces cerevisiae GN... 29 8.6

>sp|Q58DB6|EYA2_BOVIN Eyes absent homolog 2 OS=Bos taurus GN=EYA2
PE=2 SV=1
Length = 537

Score = 30.8 bits (68), Expect = 2.3
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = -2

Query: 184 HSQEANCSYSPYYISRL*NCPLPLRV-TFVLRVSSNPIPS 68
+SQ + SY+P Y+ CP PL T+VL+ +S+ IPS
Sbjct: 173 YSQYYSSSYNPPYVPASSICPSPLSTSTYVLQEASHNIPS 212


>sp|P14000|ARS_HEMPU Arylsulfatase OS=Hemicentrotus pulcherrimus
PE=1 SV=1
Length = 551

Score = 29.6 bits (65), Expect = 5.0
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = -2

Query: 391 CGHSEVFFTVKHSRTLSHHLFSLVANTP 308
CGH +VF TVK T+ H +LV TP
Sbjct: 480 CGHEDVFLTVK--STVEEHKAALVKGTP 505


>sp|Q6BMI2|HIR3_DEBHA Histone transcription regulator 3 homolog
OS=Debaryomyces hansenii GN=HIR3 PE=3 SV=2
Length = 1776

Score = 29.3 bits (64), Expect = 6.6
Identities = 22/87 (25%), Positives = 41/87 (47%)
Frame = +2

Query: 128 IS*SRYIVGAVATVGFLGMSERL*SDLQMLLNLWKTDCSVAVFRLTNNISIGDGSGHRFL 307
+S R ++G + + L S + + L +LW+T CS + N++ + +G RF+
Sbjct: 1463 LSSDRNLIGLIQMLPKLRRSNSI---MVSLYSLWETLCSSICKIIRNSLKVDEGFTERFM 1519

Query: 308 WSVSN*GEKMMAKGSAVLNSEKDF*VP 388
S +K M ++L + K VP
Sbjct: 1520 SSSGY--QKFMMNSKSLLENMKGDGVP 1544


>sp|P33306|BCK2_YEAST Protein BCK2 OS=Saccharomyces cerevisiae
GN=BCK2 PE=1 SV=2
Length = 851

Score = 28.9 bits (63), Expect = 8.6
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -3

Query: 255 KTATEQSVFHKLSNICKSLQSLSDIPRKPTVATAPTIYLDYEIAH 121
++AT S ++LS SL S++D+P + I+LD + H
Sbjct: 429 RSATRGSSLYRLSRDLNSLPSVTDLPEMDSTTPVNEIFLDGQPQH 473


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917481|Adiantum capillus-veneris mRNA, clone:
YMU001_000101_D03.
(422 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******