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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP917490
Clone id YMU001_000101_D12
Library
Length 560
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000101_D12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GCTTCCAACTTTTGGTCCATCATCAGATGCTCTCCTTTGAAGAGCTGTCACTCGCAATGG
ATGATATGGTCGGTCACTAGGATACGAGGTATTAGCAGAGCTGGACAAGCCGAAAGTTTC
CACACTCGAACCCAAACTATGCCGCATAGAAGAGCATCCCTGGAGACACCTAGATGCATT
CACTTCACCCAATGAGGAGACAGCTGCTGCCGTCCTGGATAGTACAAAGGATGCTTGCGC
CATAATGGGAATGTGCCCCCTAAGTAAAATTGATACACAGTTGGTAAAGAGATAAATCTC
TAAAAGTGGGCAATGGCACAATAATTGTATTGCCGGCGTGCAGTCCTGCAATATGTGCGC
AAGTCTGAAGGCATGGCTACATTAAAGACAGGTCGCGCTTTGGGGTGAGTGATGAGGAGA
GCGGCAAGGAAAATCAGGCTCTCCACGATGGAAATTCTCAGGCGAAGTATATCAAATTAA
TCAGAATTAGCGGAGCCCTTTCGCAACTTCACTGCGTGTTTTCCACAGTTGAGGCTCTTC
GTTCCGGCACGAAAACTTCT
■■Homology search results ■■ -
sp_hit_id Q8DQ60
Definition sp|Q8DQ60|PROA_STRR6 Gamma-glutamyl phosphate reductase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6)
Align length 40
Score (bit) 31.6
E-value 2.8
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917490|Adiantum capillus-veneris mRNA, clone:
YMU001_000101_D12.
         (560 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8DQ60|PROA_STRR6 Gamma-glutamyl phosphate reductase OS=Strep...    32   2.8  
sp|Q97R94|PROA_STRPN Gamma-glutamyl phosphate reductase OS=Strep...    32   2.8  
sp|Q04KZ2|PROA_STRP2 Gamma-glutamyl phosphate reductase OS=Strep...    32   2.8  
sp|Q8MQJ9|BRAT_DROME Brain tumor protein OS=Drosophila melanogas...    32   2.8  
sp|P22222|E13B_CELCE Glucan endo-1,3-beta-glucosidase OS=Cellulo...    31   4.7  
sp|A6RG85|NM111_AJECN Pro-apoptotic serine protease NMA111 OS=Aj...    30   6.2  
sp|Q59146|E13B_ARTSW Glucan endo-1,3-beta-glucosidase OS=Arthrob...    30   8.1  

>sp|Q8DQ60|PROA_STRR6 Gamma-glutamyl phosphate reductase
           OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6)
           GN=proA PE=3 SV=1
          Length = 420

 Score = 31.6 bits (70), Expect = 2.8
 Identities = 16/40 (40%), Positives = 19/40 (47%)
 Frame = +2

Query: 116 VSTLEPKLCRIEEHPWRHLDAFTSPNEETAAAVLDSTKDA 235
           VS+LE  +  IE H   H DA  + N E AA   D    A
Sbjct: 326 VSSLEEAVAHIESHSTHHSDAIVTENAEAAAYFTDQVDSA 365


>sp|Q97R94|PROA_STRPN Gamma-glutamyl phosphate reductase
           OS=Streptococcus pneumoniae GN=proA PE=3 SV=1
          Length = 420

 Score = 31.6 bits (70), Expect = 2.8
 Identities = 16/40 (40%), Positives = 19/40 (47%)
 Frame = +2

Query: 116 VSTLEPKLCRIEEHPWRHLDAFTSPNEETAAAVLDSTKDA 235
           VS+LE  +  IE H   H DA  + N E AA   D    A
Sbjct: 326 VSSLEEAVAHIESHSTHHSDAIVTENAEAAAYFTDQVDSA 365


>sp|Q04KZ2|PROA_STRP2 Gamma-glutamyl phosphate reductase
           OS=Streptococcus pneumoniae serotype 2 (strain D39 /
           NCTC 7466) GN=proA PE=3 SV=1
          Length = 420

 Score = 31.6 bits (70), Expect = 2.8
 Identities = 16/40 (40%), Positives = 19/40 (47%)
 Frame = +2

Query: 116 VSTLEPKLCRIEEHPWRHLDAFTSPNEETAAAVLDSTKDA 235
           VS+LE  +  IE H   H DA  + N E AA   D    A
Sbjct: 326 VSSLEEAVAHIESHSTHHSDAIVTENAEAAAYFTDQVDSA 365


>sp|Q8MQJ9|BRAT_DROME Brain tumor protein OS=Drosophila melanogaster
           GN=brat PE=1 SV=2
          Length = 1037

 Score = 31.6 bits (70), Expect = 2.8
 Identities = 27/87 (31%), Positives = 36/87 (41%)
 Frame = -3

Query: 267 LLRGHIPIMAQASFVLSRTAAAVSSLGEVNASRCLQGCSSMRHSLGSSVETFGLSSSANT 88
           ++ GH PI           +A+VSS    ++S C    SS   S  SS  T GLS   +T
Sbjct: 66  VINGHHPI-----------SASVSSSSSASSSSCSSSSSSSSSSSSSSSSTSGLSGCGST 114

Query: 87  SYPSDRPYHPLRVTALQRRASDDGPKV 7
           S           V +    AS +GP V
Sbjct: 115 S---------SSVISANNVASSNGPGV 132


>sp|P22222|E13B_CELCE Glucan endo-1,3-beta-glucosidase
           OS=Cellulosimicrobium cellulans PE=1 SV=1
          Length = 548

 Score = 30.8 bits (68), Expect = 4.7
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = +3

Query: 372 HGYIKDRSRFGVSDEESGKENQALHDGNSQAKYIKLIRISGALSQL 509
           H  + +   +  + ++ G     +HDGN QA YIKL   +G  + L
Sbjct: 359 HQQMANGKAYAFAFDDVGAHESLVHDGNPQAAYIKLDPFTGTATPL 404


>sp|A6RG85|NM111_AJECN Pro-apoptotic serine protease NMA111
           OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=NMA111
           PE=3 SV=2
          Length = 1028

 Score = 30.4 bits (67), Expect = 6.2
 Identities = 14/52 (26%), Positives = 27/52 (51%)
 Frame = -1

Query: 476 FDILRLRISIVESLIFLAALLITHPKARPVFNVAMPSDLRTYCRTARRQYNY 321
           FD+  + +++ +S+I +A ++  HP          PS ++   +TAR   NY
Sbjct: 594 FDLCDINVTVADSIIVMAKVIFLHPLQNYTIIQYDPSLVQAPVKTARLSTNY 645


>sp|Q59146|E13B_ARTSW Glucan endo-1,3-beta-glucosidase
           OS=Arthrobacter sp. (strain YCWD3) GN=glcI PE=3 SV=1
          Length = 548

 Score = 30.0 bits (66), Expect = 8.1
 Identities = 13/46 (28%), Positives = 23/46 (50%)
 Frame = +3

Query: 372 HGYIKDRSRFGVSDEESGKENQALHDGNSQAKYIKLIRISGALSQL 509
           H  + +   +  + ++ G     +HDGN QA YIKL   +G  + +
Sbjct: 359 HQQMANGKAYAFAFDDVGAHESLVHDGNPQAAYIKLDPFTGTATPI 404
tr_hit_id Q228Z0
Definition tr|Q228Z0|Q228Z0_TETTH Putative uncharacterized protein OS=Tetrahymena thermophila SB210
Align length 40
Score (bit) 38.1
E-value 0.33
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917490|Adiantum capillus-veneris mRNA, clone:
YMU001_000101_D12.
         (560 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q228Z0|Q228Z0_TETTH Putative uncharacterized protein OS=Tetra...    38   0.33 
tr|Q5P2F3|Q5P2F3_AZOSE Probable cytidylyltransferase OS=Azoarcus...    34   6.2  
tr|Q5KM66|Q5KM66_CRYNE Expressed protein (Putative uncharacteriz...    34   6.2  
tr|Q2JBQ6|Q2JBQ6_FRASC Uricase OS=Frankia sp. (strain CcI3) GN=F...    33   8.1  
tr|A8XT64|A8XT64_CAEBR Putative uncharacterized protein OS=Caeno...    33   8.1  

>tr|Q228Z0|Q228Z0_TETTH Putative uncharacterized protein
            OS=Tetrahymena thermophila SB210 GN=TTHERM_01466260 PE=4
            SV=1
          Length = 2847

 Score = 38.1 bits (87), Expect = 0.33
 Identities = 16/40 (40%), Positives = 25/40 (62%)
 Frame = -3

Query: 435  DFPCRSPHHSPQSATCL*CSHAFRLAHILQDCTPAIQLLC 316
            DFPC++   SPQ   CL C + ++L ++L+ CTP   + C
Sbjct: 1935 DFPCQTCQISPQE--CLSCFNNYKLENVLKQCTPICDISC 1972


>tr|Q5P2F3|Q5P2F3_AZOSE Probable cytidylyltransferase OS=Azoarcus
           sp. (strain EbN1) GN=AZOSEA23860 PE=4 SV=1
          Length = 187

 Score = 33.9 bits (76), Expect = 6.2
 Identities = 30/91 (32%), Positives = 37/91 (40%), Gaps = 7/91 (7%)
 Frame = -3

Query: 435 DFPCRSPHHSPQSATCL*CSHAFRLAHILQDCTPAIQLLCHCPLLEIYLFTN-CVSILLR 259
           D PC S   S +  T       FR A   + C P         L    +FTN C  IL R
Sbjct: 7   DLPCASTLESRRPQTATRKMRYFRPAFETKICPPEELASRAAALPRPLVFTNGCFDILHR 66

Query: 258 GHIPIMAQ------ASFVLSRTAAAVSSLGE 184
           GH+  +AQ      A  V   T A+V  LG+
Sbjct: 67  GHVTYLAQARALGAAMIVALNTDASVRRLGK 97


>tr|Q5KM66|Q5KM66_CRYNE Expressed protein (Putative uncharacterized
           protein) OS=Cryptococcus neoformans GN=CNB02770 PE=4
           SV=1
          Length = 197

 Score = 33.9 bits (76), Expect = 6.2
 Identities = 22/48 (45%), Positives = 26/48 (54%)
 Frame = -3

Query: 219 SRTAAAVSSLGEVNASRCLQGCSSMRHSLGSSVETFGLSSSANTSYPS 76
           S TAAA SS G+ +AS    G S+   S GSS  T    SSA+ S  S
Sbjct: 118 SATAAAGSSSGDSSASTTASGSSASSGSSGSSASTTASGSSASASSSS 165


>tr|Q2JBQ6|Q2JBQ6_FRASC Uricase OS=Frankia sp. (strain CcI3)
           GN=Francci3_1910 PE=3 SV=1
          Length = 297

 Score = 33.5 bits (75), Expect = 8.1
 Identities = 16/44 (36%), Positives = 22/44 (50%)
 Frame = -3

Query: 144 RHSLGSSVETFGLSSSANTSYPSDRPYHPLRVTALQRRASDDGP 13
           +H     +E FGL +     Y +DRPY  +  T L+  A D GP
Sbjct: 245 KHHFLVDLEPFGLDNPNTVYYAADRPYGKIEGTVLRDDAPDPGP 288


>tr|A8XT64|A8XT64_CAEBR Putative uncharacterized protein
           OS=Caenorhabditis briggsae GN=CBG18170 PE=4 SV=1
          Length = 389

 Score = 33.5 bits (75), Expect = 8.1
 Identities = 18/55 (32%), Positives = 29/55 (52%)
 Frame = +2

Query: 65  YGRSLGYEVLAELDKPKVSTLEPKLCRIEEHPWRHLDAFTSPNEETAAAVLDSTK 229
           + + L  E++ +LDK ++S     LCR+E   W     F +P+  T   V DST+
Sbjct: 122 FQQCLRAEMIQKLDKLELSDTIENLCRMEMEKWNLFVNFRAPDNITFEDVTDSTE 176