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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP917504
Clone id YMU001_000101_F06
Library
Length 502
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000101_F06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
AACTGGAAGATTCGCGGCCGCGAATTCTTCCAATTTTCTTTTTTTTTTCTTTTAACATCG
CACTTGGTAGTAGTTATTAGTGTCTTAAGCTCGTAAAACGCGATGAGACAAACAAAAGCA
AGACCGAGATCTCTGATCTTAGTGCATTGGCAGTGCCATATGAAAAAAAAACACACACAC
ACACACAATTCTATTTTGAGAATCACCTATATACATTTTTTGTGACAACTCCTAGAGGTA
TTCATACTTGTTCTTTTAGGTGCAAAGACGACATCCAAGGGTGGAACCCTCACCCCACCC
CACGTAAGAGGGCTCCCAACCTATTTGTTGGCTATGCACATTCACTTTTGTTCATATTTG
TCGAGCTTGGTATTCTGGAGCCAATATTCTAGCATTTTGTGACCTTCTTTGTACTCCGCA
AGCACACGCTTGATTTTCTCAAACTTCTCGGCTTGCTTGCGCAATTTCTCCAAAAGTTCC
AAGTCCCTTTGTCTCATGTACA
■■Homology search results ■■ -
sp_hit_id Q6P5F6
Definition sp|Q6P5F6|S39AA_MOUSE Zinc transporter ZIP10 OS=Mus musculus
Align length 70
Score (bit) 33.9
E-value 0.33
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917504|Adiantum capillus-veneris mRNA, clone:
YMU001_000101_F06.
         (449 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6P5F6|S39AA_MOUSE Zinc transporter ZIP10 OS=Mus musculus GN=...    34   0.33 
sp|Q54PT3|C556A_DICDI Probable cytochrome P450 556A1 OS=Dictyost...    33   0.56 
sp|Q8NF91|SYNE1_HUMAN Nesprin-1 OS=Homo sapiens GN=SYNE1 PE=1 SV=2     31   2.1  
sp|Q96AA8|JKIP2_HUMAN Janus kinase and microtubule-interacting p...    31   2.8  
sp|Q646F6|TA2R7_PAPHA Taste receptor type 2 member 7 OS=Papio ha...    30   3.6  
sp|Q645T7|TA2R7_MACMU Taste receptor type 2 member 7 OS=Macaca m...    30   4.7  
sp|B2KIE9|SEPT8_RHIFE Septin-8 OS=Rhinolophus ferrumequinum GN=S...    30   4.7  
sp|B5FW69|SEPT8_OTOGA Septin-8 OS=Otolemur garnettii GN=SEPT8 PE...    30   4.7  
sp|Q92599|SEPT8_HUMAN Septin-8 OS=Homo sapiens GN=SEPT8 PE=1 SV=4      30   4.7  
sp|B1MTN8|SEPT8_CALMO Septin-8 OS=Callicebus moloch GN=SEPT8 PE=...    30   4.7  
sp|B0KWP7|SEPT8_CALJA Septin-8 OS=Callithrix jacchus GN=SEPT8 PE...    30   4.7  
sp|P46935|NEDD4_MOUSE E3 ubiquitin-protein ligase NEDD4 OS=Mus m...    30   4.7  
sp|Q646C4|TA2R7_PANTR Taste receptor type 2 member 7 (Fragment) ...    30   6.1  
sp|Q646D6|TA2R7_PANPA Taste receptor type 2 member 7 OS=Pan pani...    30   6.1  
sp|Q54KB8|SYEC_DICDI Probable glutamyl-tRNA synthetase, cytoplas...    30   6.1  
sp|B0BNF1|SEPT8_RAT Septin-8 OS=Rattus norvegicus GN=Sept8 PE=1 ...    30   6.1  
sp|Q8CHH9|SEPT8_MOUSE Septin-8 OS=Mus musculus GN=Sept8 PE=1 SV=4      30   6.1  
sp|Q9V297|MALE_PYRAB Maltotriose-binding protein OS=Pyrococcus a...    30   6.1  
sp|Q5JME8|DI195_ORYSJ Protein DEHYDRATION-INDUCED 19 homolog 5 O...    30   6.1  
sp|Q9NYW3|TA2R7_HUMAN Taste receptor type 2 member 7 OS=Homo sap...    29   8.0  
sp|Q646A2|TA2R7_GORGO Taste receptor type 2 member 7 OS=Gorilla ...    29   8.0  
sp|P97690|SMC3_RAT Structural maintenance of chromosomes protein...    29   8.0  
sp|Q5R4K5|SMC3_PONAB Structural maintenance of chromosomes prote...    29   8.0  
sp|Q9CW03|SMC3_MOUSE Structural maintenance of chromosomes prote...    29   8.0  
sp|Q9UQE7|SMC3_HUMAN Structural maintenance of chromosomes prote...    29   8.0  
sp|O97594|SMC3_BOVIN Structural maintenance of chromosomes prote...    29   8.0  

>sp|Q6P5F6|S39AA_MOUSE Zinc transporter ZIP10 OS=Mus musculus
           GN=Slc39a10 PE=1 SV=1
          Length = 833

 Score = 33.9 bits (76), Expect = 0.33
 Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
 Frame = +1

Query: 1   NIALGSSY*CLKLVKRDETNKSKTEISDLSALAVPYEKKTHTHTQFYFENHL----YTFF 168
           N+ LG     +K+V+ +  +     +S L  LAV   K  H+HT  +F NHL    +T  
Sbjct: 88  NLGLGE----IKVVEINHEDLGHDHVSHLDILAVQEGKHFHSHTHQHFHNHLNAENHTTT 143

Query: 169 VTTPRGIHTC 198
             T +  H C
Sbjct: 144 SVTSKRNHKC 153


>sp|Q54PT3|C556A_DICDI Probable cytochrome P450 556A1
           OS=Dictyostelium discoideum GN=cyp556a1 PE=3 SV=1
          Length = 657

 Score = 33.1 bits (74), Expect = 0.56
 Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
 Frame = +1

Query: 73  EISDLSALAVPYEKKTHTHTQFYFENHLYTFFVTTPR-----GIHTCSFRCKDDIQ 225
           EI D++A+   Y +K++ ++ ++  N    F +T         I+ C+F CKD +Q
Sbjct: 81  EIKDINAIQYVYNEKSNNYSLYWNLNKSSNFILTGSEIKRFFRIYYCAFNCKDSLQ 136


>sp|Q8NF91|SYNE1_HUMAN Nesprin-1 OS=Homo sapiens GN=SYNE1 PE=1 SV=2
          Length = 8797

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
 Frame = -3

Query: 444  MRQRDLELLEKLRKQAEKFEKIKRVLAEYKEGHKMLEYWL--QNTKLDKY 301
            +++R   + E+ ++   K EK+ R+  EY+   K  E WL  +  KLD+Y
Sbjct: 3469 LQERYRAIQERAKEAVTKSEKLVRLHQEYQRDLKAFEVWLGQEQEKLDQY 3518


>sp|Q96AA8|JKIP2_HUMAN Janus kinase and microtubule-interacting
           protein 2 OS=Homo sapiens GN=JAKMIP2 PE=2 SV=1
          Length = 810

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 14/49 (28%), Positives = 35/49 (71%)
 Frame = -3

Query: 438 QRDLELLEKLRKQAEKFEKIKRVLAEYKEGHKMLEYWLQNTKLDKYEQK 292
           +R+ ELLEK+ KQ  +  ++++ L + ++ +++LE+  +N +L++ E++
Sbjct: 551 KRNQELLEKIEKQEAENHRLQQELQDARDQNELLEF--RNLELEERERR 597


>sp|Q646F6|TA2R7_PAPHA Taste receptor type 2 member 7 OS=Papio
           hamadryas GN=TAS2R7 PE=3 SV=1
          Length = 317

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 23/89 (25%), Positives = 36/89 (40%), Gaps = 9/89 (10%)
 Frame = +2

Query: 95  WQCHMKK-KHTHTHNSILRITYIHFL*QLLEVFILVL--------LGAKTTSKGGTLTPP 247
           W C + K +H  T   +  +T + F   L+  F+L+L        +    T      T  
Sbjct: 170 WSCRVTKAQHASTKLFLNLVTLLPFSVCLVSFFLLILSLWRHIRRMQLSATGCRDPSTEA 229

Query: 248 HVRGLPTYLLAMHIHFCSYLSSLVFWSQY 334
           HVR L   +  + +    YLS L+  S Y
Sbjct: 230 HVRALKAVISFLFLFIAYYLSFLIATSSY 258


>sp|Q645T7|TA2R7_MACMU Taste receptor type 2 member 7 OS=Macaca
           mulatta GN=TAS2R7 PE=3 SV=1
          Length = 318

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 23/89 (25%), Positives = 36/89 (40%), Gaps = 9/89 (10%)
 Frame = +2

Query: 95  WQCHMKK-KHTHTHNSILRITYIHFL*QLLEVFILVL--------LGAKTTSKGGTLTPP 247
           W C + K +H  T   +  +T + F   L+  F+L+L        +    T      T  
Sbjct: 170 WSCRVTKAQHASTKLFLNLVTLLPFSVCLMSFFLLILSLWRHIRRMQLSATGCRDPSTEA 229

Query: 248 HVRGLPTYLLAMHIHFCSYLSSLVFWSQY 334
           HVR L   +  + +    YLS L+  S Y
Sbjct: 230 HVRALKAVISFLLLFIAYYLSFLIATSSY 258


>sp|B2KIE9|SEPT8_RHIFE Septin-8 OS=Rhinolophus ferrumequinum
           GN=SEPT8 PE=3 SV=1
          Length = 429

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 15/30 (50%), Positives = 21/30 (70%)
 Frame = -3

Query: 444 MRQRDLELLEKLRKQAEKFEKIKRVLAEYK 355
           +++ +LEL EK R+  EKFE +KRV  E K
Sbjct: 352 VKETELELKEKERELHEKFEHLKRVHQEEK 381


>sp|B5FW69|SEPT8_OTOGA Septin-8 OS=Otolemur garnettii GN=SEPT8 PE=3
           SV=1
          Length = 442

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 15/30 (50%), Positives = 21/30 (70%)
 Frame = -3

Query: 444 MRQRDLELLEKLRKQAEKFEKIKRVLAEYK 355
           +++ +LEL EK R+  EKFE +KRV  E K
Sbjct: 352 VKETELELKEKERELHEKFEHLKRVHQEEK 381


>sp|Q92599|SEPT8_HUMAN Septin-8 OS=Homo sapiens GN=SEPT8 PE=1 SV=4
          Length = 483

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 15/30 (50%), Positives = 21/30 (70%)
 Frame = -3

Query: 444 MRQRDLELLEKLRKQAEKFEKIKRVLAEYK 355
           +++ +LEL EK R+  EKFE +KRV  E K
Sbjct: 352 VKETELELKEKERELHEKFEHLKRVHQEEK 381


>sp|B1MTN8|SEPT8_CALMO Septin-8 OS=Callicebus moloch GN=SEPT8 PE=3
           SV=1
          Length = 429

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 15/30 (50%), Positives = 21/30 (70%)
 Frame = -3

Query: 444 MRQRDLELLEKLRKQAEKFEKIKRVLAEYK 355
           +++ +LEL EK R+  EKFE +KRV  E K
Sbjct: 352 VKETELELKEKERELHEKFEHLKRVHQEEK 381
tr_hit_id B8AW37
Definition tr|B8AW37|B8AW37_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica
Align length 33
Score (bit) 33.9
E-value 4.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917504|Adiantum capillus-veneris mRNA, clone:
YMU001_000101_F06.
         (449 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B8AW37|B8AW37_ORYSI Putative uncharacterized protein OS=Oryza...    34   4.2  
tr|A3B268|A3B268_ORYSJ Putative uncharacterized protein OS=Oryza...    34   4.2  
tr|B3LCG8|B3LCG8_PLAKH Putative uncharacterized protein OS=Plasm...    34   4.2  
tr|B8ABW0|B8ABW0_ORYSI Putative uncharacterized protein OS=Oryza...    33   5.5  
tr|A5ZG93|A5ZG93_9BACE Putative uncharacterized protein OS=Bacte...    33   7.2  
tr|A0C348|A0C348_PARTE Chromosome undetermined scaffold_146, who...    33   7.2  
tr|Q89ZQ6|Q89ZQ6_BACTN Putative zinc protease OS=Bacteroides the...    33   9.4  
tr|A5ZXR7|A5ZXR7_9FIRM Putative uncharacterized protein OS=Rumin...    33   9.4  
tr|A5JZY2|A5JZY2_PLAVI Putative uncharacterized protein OS=Plasm...    33   9.4  
tr|A0CE54|A0CE54_PARTE Chromosome undetermined scaffold_170, who...    33   9.4  
tr|A0BLK0|A0BLK0_PARTE Chromosome undetermined scaffold_114, who...    33   9.4  

>tr|B8AW37|B8AW37_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_19300 PE=4 SV=1
          Length = 171

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
 Frame = +1

Query: 196 CSFRCKDDIQG--WNPHPTPRKRAPNLFVGYAH 288
           CS R +DD +G  W P P P +R P   V YAH
Sbjct: 21  CSVRWRDDSRGFLWYPAPRPPRRGPLAIVVYAH 53


>tr|A3B268|A3B268_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_017140 PE=4 SV=1
          Length = 156

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
 Frame = +1

Query: 196 CSFRCKDDIQG--WNPHPTPRKRAPNLFVGYAH 288
           CS R +DD +G  W P P P +R P   V YAH
Sbjct: 21  CSVRWRDDSRGFLWYPAPRPPRRGPLAIVVYAH 53


>tr|B3LCG8|B3LCG8_PLAKH Putative uncharacterized protein
           OS=Plasmodium knowlesi (strain H) GN=PKH_143450 PE=4
           SV=1
          Length = 923

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 19/117 (16%)
 Frame = +2

Query: 155 YIHFL*QLLEVFILVLL--GAKTTSKGGTLTPPHVRGLP-TYLLAMH----IHFCSYLSS 313
           YI+ L +LL  F L L   G    +    +  P +RGL  +Y L +H      F SYLS 
Sbjct: 208 YIYLL-RLLPKFCLPLYDSGILQYACEDPILNPKLRGLEISYRLLVHDILFYAFFSYLSD 266

Query: 314 LVFWSQ----------YSSIL*PSLYSA--STRLIFSNFSACLRNFSKSSKSLCLMY 448
           L FW++          Y S+   + Y +  + RL+F N    L NFS +   + L+Y
Sbjct: 267 LPFWAKPPIELLRIYNYESLYSFNDYESEHTERLVFHNIKNILYNFSDTLNKIELLY 323


>tr|B8ABW0|B8ABW0_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_02870 PE=4 SV=1
          Length = 195

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
 Frame = +1

Query: 196 CSFRCKDDIQG--WNPHPTPRKRAPNLFVGYAH 288
           CS R +DD +G  W P P P +R P   V YAH
Sbjct: 21  CSARWRDDSRGFLWYPAPRPPRRGPLAIVVYAH 53


>tr|A5ZG93|A5ZG93_9BACE Putative uncharacterized protein
           OS=Bacteroides caccae ATCC 43185 GN=BACCAC_01911 PE=4
           SV=1
          Length = 945

 Score = 33.1 bits (74), Expect = 7.2
 Identities = 21/47 (44%), Positives = 29/47 (61%), Gaps = 4/47 (8%)
 Frame = -3

Query: 429 LELLEKLRKQ---AEKFEKIKR-VLAEYKEGHKMLEYWLQNTKLDKY 301
           +E LEK+ K+   AE  +KIK  +L +YK+  K   YWL N  LD+Y
Sbjct: 853 VEQLEKMAKEGPSAEHMQKIKEYMLKKYKDAQKENGYWLNN--LDEY 897


>tr|A0C348|A0C348_PARTE Chromosome undetermined scaffold_146, whole
           genome shotgun sequence OS=Paramecium tetraurelia
           GN=GSPATT00034693001 PE=4 SV=1
          Length = 547

 Score = 33.1 bits (74), Expect = 7.2
 Identities = 19/37 (51%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
 Frame = -3

Query: 441 RQRDLELLEKLRKQAEKFEKIKRVL-AEYKEGHKMLE 334
           R+R  +LLE  +KQAEKFEKI++ L A+  +  K LE
Sbjct: 240 RERQKKLLEDKKKQAEKFEKIRKKLEADELQQKKELE 276


>tr|Q89ZQ6|Q89ZQ6_BACTN Putative zinc protease OS=Bacteroides
           thetaiotaomicron GN=BT_4320 PE=3 SV=1
          Length = 946

 Score = 32.7 bits (73), Expect = 9.4
 Identities = 21/47 (44%), Positives = 29/47 (61%), Gaps = 4/47 (8%)
 Frame = -3

Query: 429 LELLEKLRKQ---AEKFEKIKR-VLAEYKEGHKMLEYWLQNTKLDKY 301
           +E LEK+ K+   AE  +KIK  +L +YK+  K   YWL N  LD+Y
Sbjct: 853 IEQLEKMAKEGPSAEHMQKIKEYMLKKYKDAQKENGYWLGN--LDEY 897


>tr|A5ZXR7|A5ZXR7_9FIRM Putative uncharacterized protein
           OS=Ruminococcus obeum ATCC 29174 GN=RUMOBE_03823 PE=4
           SV=1
          Length = 217

 Score = 32.7 bits (73), Expect = 9.4
 Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
 Frame = +2

Query: 185 VFILVLLGAKTTSKGGTLTPPHVRGLPTYLLAMHIHFCSYLSS----LVFWSQYSSIL*P 352
           +F+LV LG   T  GG L    + G+P Y+L  HI+ C+ +      +V +  + +++  
Sbjct: 131 MFLLVFLGT-ITGVGGGLLRDIMAGVPPYILVRHIYACASIVGAIVCVVLYRNFGAVV-- 187

Query: 353 SLYSASTRLIFSNFSA 400
           S+  AS  +I   + A
Sbjct: 188 SMVGASAVVILVRYLA 203


>tr|A5JZY2|A5JZY2_PLAVI Putative uncharacterized protein
           OS=Plasmodium vivax GN=PVX_123545 PE=4 SV=1
          Length = 960

 Score = 32.7 bits (73), Expect = 9.4
 Identities = 36/117 (30%), Positives = 54/117 (46%), Gaps = 19/117 (16%)
 Frame = +2

Query: 155 YIHFL*QLLEVFILVLL--GAKTTSKGGTLTPPHVRGLP-TYLLAMH----IHFCSYLSS 313
           YI+ L +LL  F L L   G    +    +  P +RGL  +Y L +H      F SYLS 
Sbjct: 206 YIYLL-RLLPKFCLPLYDSGILQYACEDPILNPKLRGLELSYRLLVHDILFYAFFSYLSD 264

Query: 314 LVFWSQ----------YSSIL*PSLYSA--STRLIFSNFSACLRNFSKSSKSLCLMY 448
           L FW++          Y S+   + Y +  + RL+F N    L NF+ +   + L+Y
Sbjct: 265 LPFWAKPPVELLRIYNYESLYSFNDYESEHTERLVFHNIKNILYNFADTLNKIELLY 321


>tr|A0CE54|A0CE54_PARTE Chromosome undetermined scaffold_170, whole
           genome shotgun sequence OS=Paramecium tetraurelia
           GN=GSPATT00037507001 PE=4 SV=1
          Length = 536

 Score = 32.7 bits (73), Expect = 9.4
 Identities = 15/27 (55%), Positives = 21/27 (77%)
 Frame = -3

Query: 441 RQRDLELLEKLRKQAEKFEKIKRVLAE 361
           R++  +LLE  +KQAEKFEKI++ L E
Sbjct: 229 REKQRKLLEDKQKQAEKFEKIRKKLEE 255