BP917512 |
Clone id |
YMU001_000101_G05 |
Library |
YMU01 |
Length |
335 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000101_G05. |
Accession |
BP917512 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
ACAAGTGTGTCACATGCAGCAAGACATGTTTATCCATTGGAGAAGGTGAGCGTGGAAGGG TCAGCATATCACAAGTCATGCTTCAAATGCTTACAATGAGGCTGTTCTATCAGCCCGTCT AACTATGCAGCCATGGAGGGCAGGCTTTATTGCAAGCACCACTTCAAGCAGCTCTTCAAA GAGAAAGGCAATTACAGCCAACTTCTCGTCAAGCTTCCCTCTTCTAAGCTGCCATAGTGT GCGAGATGCTTGCCTCTTCTGTTTCACACAAACACACATTCTCCCATTCTTCTTTCTTGC TCTTCTCTTTTACTTTTTTCTTTTATGTTTGATTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P29675 |
Definition |
sp|P29675|SF3_HELAN Pollen-specific protein SF3 OS=Helianthus annuus |
Align length |
61 |
Score (bit) |
100.0 |
E-value |
2.0e-21 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NNM5 |
Definition |
tr|A9NNM5|A9NNM5_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
58 |
Score (bit) |
104.0 |
E-value |
2.0e-21 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917512|Adiantum capillus-veneris mRNA, clone: YMU001_000101_G05. (321 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NNM5|A9NNM5_PICSI Putative uncharacterized protein OS=Picea... 104 2e-21 tr|Q9ZTN6|Q9ZTN6_PETHY PGPS/D1 OS=Petunia hybrida GN=PGPS/D1 PE=... 104 2e-21 tr|Q84Q79|Q84Q79_ORYSJ Os03g0266100 protein OS=Oryza sativa subs... 103 3e-21 tr|A2XEV9|A2XEV9_ORYSI Putative uncharacterized protein OS=Oryza... 103 3e-21 tr|Q9SP40|Q9SP40_TOBAC LIM domain protein PLIM1 OS=Nicotiana tab... 103 4e-21 tr|Q9SNX4|Q9SNX4_TOBAC Pollen specific LIM domain protein 1a OS=... 103 4e-21 tr|Q9SNX3|Q9SNX3_TOBAC Pollen specific LIM domain protein 1b OS=... 103 6e-21 tr|A9SHN8|A9SHN8_PHYPA Predicted protein OS=Physcomitrella paten... 103 6e-21 tr|A9SY81|A9SY81_PHYPA Predicted protein OS=Physcomitrella paten... 101 2e-20 tr|Q9SP34|Q9SP34_HELAN LIM domain protein PLIM1b OS=Helianthus a... 100 4e-20 tr|Q549A3|Q549A3_HELAN LIM domain protein PLIM1a OS=Helianthus a... 100 4e-20 tr|A9NNB4|A9NNB4_PICSI Putative uncharacterized protein OS=Picea... 100 4e-20 tr|A9PII9|A9PII9_POPTR Putative uncharacterized protein OS=Popul... 100 5e-20 tr|A9PDK3|A9PDK3_POPTR Putative uncharacterized protein OS=Popul... 100 5e-20 tr|A5BSA7|A5BSA7_VITVI Putative uncharacterized protein (Chromos... 100 5e-20 tr|Q9M047|Q9M047_ARATH Transcription factor L2 OS=Arabidopsis th... 100 6e-20 tr|Q94JX2|Q94JX2_ARATH Transcription factor L2 OS=Arabidopsis th... 100 6e-20 tr|A9PDY3|A9PDY3_POPTR Putative uncharacterized protein OS=Popul... 100 6e-20 tr|A9PB06|A9PB06_POPTR Putative uncharacterized protein OS=Popul... 100 6e-20 tr|A9PAZ8|A9PAZ8_POPTR Putative uncharacterized protein OS=Popul... 100 6e-20 tr|A7QL82|A7QL82_VITVI Chromosome chr3 scaffold_117, whole genom... 100 6e-20 tr|A0SVL2|A0SVL2_9ROSI LIM domain protein GLIM1a OS=Populus trem... 100 6e-20 tr|O04193|O04193_ARATH Putative LIM-domain protein (At2g39900/T2... 99 8e-20 tr|B7FME7|B7FME7_MEDTR Putative uncharacterized protein OS=Medic... 99 8e-20 tr|Q8SBC9|Q8SBC9_POPKI Transcription factor LIM OS=Populus kitak... 99 1e-19 tr|Q8SBC8|Q8SBC8_POPKI Transcription factor LIM OS=Populus kitak... 99 1e-19 tr|A0SVL6|A0SVL6_9ROSI LIM domain protein WLIM1b OS=Populus trem... 99 1e-19 tr|A0SVL5|A0SVL5_9ROSI LIM domain protein WLIM1a OS=Populus trem... 99 1e-19 tr|Q8VWW1|Q8VWW1_GOSHI LIM domain protein OS=Gossypium hirsutum ... 99 1e-19 tr|A9PE05|A9PE05_POPTR Putative uncharacterized protein OS=Popul... 99 1e-19
>tr|A9NNM5|A9NNM5_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 187
Score = 104 bits (260), Expect = 2e-21 Identities = 46/58 (79%), Positives = 49/58 (84%) Frame = +2
Query: 14 VYPLEKVSVEGSAYHKSCFKCLQ*GCSISPSNYAAMEGRLYCKHHFKQLFKEKGNYSQ 187 VYP+EKVSVEG YHK CFKC+ GC ISPSNY A+EGRLYCKHH QLFKEKGNYSQ Sbjct: 117 VYPIEKVSVEGVGYHKQCFKCIHGGCVISPSNYIAIEGRLYCKHHHAQLFKEKGNYSQ 174
Score = 62.0 bits (149), Expect = 1e-08 Identities = 25/55 (45%), Positives = 39/55 (70%) Frame = +2
Query: 14 VYPLEKVSVEGSAYHKSCFKCLQ*GCSISPSNYAAMEGRLYCKHHFKQLFKEKGN 178 VY +++++ +GS +HK+CF+C ++ SNY++ EG LYCK HF QLFK G+ Sbjct: 17 VYVVDQLTADGSVFHKACFRCHHCNGTLKLSNYSSFEGVLYCKPHFDQLFKRTGS 71
>tr|Q9ZTN6|Q9ZTN6_PETHY PGPS/D1 OS=Petunia hybrida GN=PGPS/D1 PE=2 SV=1 Length = 195
Score = 104 bits (259), Expect = 2e-21 Identities = 46/61 (75%), Positives = 52/61 (85%) Frame = +2
Query: 5 ARHVYPLEKVSVEGSAYHKSCFKCLQ*GCSISPSNYAAMEGRLYCKHHFKQLFKEKGNYS 184 ++ VYP+EKVSV G+AYHK+CFKC GC+ISPSNY A EGRLYCKHH QLFKEKGNYS Sbjct: 114 SKTVYPIEKVSVNGAAYHKACFKCTHGGCTISPSNYIAHEGRLYCKHHHIQLFKEKGNYS 173
Query: 185 Q 187 Q Sbjct: 174 Q 174
Score = 59.3 bits (142), Expect = 9e-08 Identities = 22/55 (40%), Positives = 37/55 (67%) Frame = +2
Query: 14 VYPLEKVSVEGSAYHKSCFKCLQ*GCSISPSNYAAMEGRLYCKHHFKQLFKEKGN 178 VY +++++ + YHK+CF+C ++ SN+ + EG +YC+HHF QLFK G+ Sbjct: 17 VYLVDRLAADNRVYHKACFRCYHCKSTLKLSNFNSFEGVIYCRHHFDQLFKRTGS 71
>tr|Q84Q79|Q84Q79_ORYSJ Os03g0266100 protein OS=Oryza sativa subsp. japonica GN=OJ1364E02.4 PE=2 SV=1 Length = 196
Score = 103 bits (258), Expect = 3e-21 Identities = 45/60 (75%), Positives = 52/60 (86%) Frame = +2
Query: 5 ARHVYPLEKVSVEGSAYHKSCFKCLQ*GCSISPSNYAAMEGRLYCKHHFKQLFKEKGNYS 184 ++ YPLEKV+VEG AYHKSCFKC GC+ISPSNYAA+EG LYCKHHF QLFKEKG+Y+ Sbjct: 112 SKTAYPLEKVTVEGQAYHKSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYN 171
Score = 70.1 bits (170), Expect = 5e-11 Identities = 28/58 (48%), Positives = 44/58 (75%) Frame = +2
Query: 14 VYPLEKVSVEGSAYHKSCFKCLQ*GCSISPSNYAAMEGRLYCKHHFKQLFKEKGNYSQ 187 VYP++++S +G +H+SCFKC ++S NY+++EG YCK HF+QLFKE G+Y++ Sbjct: 16 VYPMDQLSTDGVVFHRSCFKCQHCKSTLSLGNYSSIEGVPYCKPHFEQLFKETGSYNK 73
>tr|A2XEV9|A2XEV9_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_10876 PE=4 SV=1 Length = 196
Score = 103 bits (258), Expect = 3e-21 Identities = 45/60 (75%), Positives = 52/60 (86%) Frame = +2
Query: 5 ARHVYPLEKVSVEGSAYHKSCFKCLQ*GCSISPSNYAAMEGRLYCKHHFKQLFKEKGNYS 184 ++ YPLEKV+VEG AYHKSCFKC GC+ISPSNYAA+EG LYCKHHF QLFKEKG+Y+ Sbjct: 112 SKTAYPLEKVTVEGQAYHKSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYN 171
Score = 70.1 bits (170), Expect = 5e-11 Identities = 28/58 (48%), Positives = 44/58 (75%) Frame = +2
Query: 14 VYPLEKVSVEGSAYHKSCFKCLQ*GCSISPSNYAAMEGRLYCKHHFKQLFKEKGNYSQ 187 VYP++++S +G +H+SCFKC ++S NY+++EG YCK HF+QLFKE G+Y++ Sbjct: 16 VYPMDQLSTDGVVFHRSCFKCQHCKSTLSLGNYSSIEGVPYCKPHFEQLFKETGSYNK 73
>tr|Q9SP40|Q9SP40_TOBAC LIM domain protein PLIM1 OS=Nicotiana tabacum GN=PLIM1 PE=4 SV=1 Length = 191
Score = 103 bits (257), Expect = 4e-21 Identities = 46/58 (79%), Positives = 50/58 (86%) Frame = +2
Query: 14 VYPLEKVSVEGSAYHKSCFKCLQ*GCSISPSNYAAMEGRLYCKHHFKQLFKEKGNYSQ 187 VYP+EKVSV G+AYHK+CFKC GC+ISPSNY A EGRLYCKHH QLFKEKGNYSQ Sbjct: 117 VYPIEKVSVNGTAYHKACFKCSHGGCTISPSNYIAHEGRLYCKHHHIQLFKEKGNYSQ 174
Score = 55.1 bits (131), Expect = 2e-06 Identities = 21/55 (38%), Positives = 36/55 (65%) Frame = +2
Query: 14 VYPLEKVSVEGSAYHKSCFKCLQ*GCSISPSNYAAMEGRLYCKHHFKQLFKEKGN 178 VY +++++ + YHK+CF+C ++ SN+ + EG +YC+ HF QLFK G+ Sbjct: 17 VYLVDRLAADNRIYHKACFRCYHCKSTLKLSNFNSFEGVIYCRPHFDQLFKRTGS 71
>tr|Q9SNX4|Q9SNX4_TOBAC Pollen specific LIM domain protein 1a OS=Nicotiana tabacum PE=2 SV=1 Length = 191
Score = 103 bits (257), Expect = 4e-21 Identities = 46/58 (79%), Positives = 50/58 (86%) Frame = +2
Query: 14 VYPLEKVSVEGSAYHKSCFKCLQ*GCSISPSNYAAMEGRLYCKHHFKQLFKEKGNYSQ 187 VYP+EKVSV G+AYHK+CFKC GC+ISPSNY A EGRLYCKHH QLFKEKGNYSQ Sbjct: 117 VYPIEKVSVNGTAYHKACFKCSHGGCTISPSNYIAHEGRLYCKHHHIQLFKEKGNYSQ 174
Score = 55.1 bits (131), Expect = 2e-06 Identities = 21/55 (38%), Positives = 36/55 (65%) Frame = +2
Query: 14 VYPLEKVSVEGSAYHKSCFKCLQ*GCSISPSNYAAMEGRLYCKHHFKQLFKEKGN 178 VY +++++ + YHK+CF+C ++ SN+ + EG +YC+ HF QLFK G+ Sbjct: 17 VYLVDRLAADNRIYHKACFRCYHCKSTLKLSNFNSFEGVIYCRPHFDQLFKRTGS 71
>tr|Q9SNX3|Q9SNX3_TOBAC Pollen specific LIM domain protein 1b OS=Nicotiana tabacum PE=2 SV=1 Length = 181
Score = 103 bits (256), Expect = 6e-21 Identities = 46/58 (79%), Positives = 49/58 (84%) Frame = +2
Query: 14 VYPLEKVSVEGSAYHKSCFKCLQ*GCSISPSNYAAMEGRLYCKHHFKQLFKEKGNYSQ 187 VYP+EKVSV G+AYHK CFKC GC+ISPSNY A EGRLYCKHH QLFKEKGNYSQ Sbjct: 117 VYPIEKVSVNGTAYHKGCFKCSHGGCTISPSNYIAHEGRLYCKHHHIQLFKEKGNYSQ 174
Score = 55.1 bits (131), Expect = 2e-06 Identities = 21/55 (38%), Positives = 36/55 (65%) Frame = +2
Query: 14 VYPLEKVSVEGSAYHKSCFKCLQ*GCSISPSNYAAMEGRLYCKHHFKQLFKEKGN 178 VY +++++ + YHK+CF+C ++ SN+ + EG +YC+ HF QLFK G+ Sbjct: 17 VYLVDRLAADNRIYHKACFRCYHCKSTLKLSNFNSFEGVIYCRPHFDQLFKRTGS 71
>tr|A9SHN8|A9SHN8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_79552 PE=4 SV=1 Length = 191
Score = 103 bits (256), Expect = 6e-21 Identities = 44/61 (72%), Positives = 52/61 (85%) Frame = +2
Query: 5 ARHVYPLEKVSVEGSAYHKSCFKCLQ*GCSISPSNYAAMEGRLYCKHHFKQLFKEKGNYS 184 ++ VYP+EK +VEG YHK CFKC+ GC+ISPSNYAA+EGRLYCK H+ QLFKEKGNYS Sbjct: 113 SKTVYPIEKTTVEGLPYHKQCFKCVHGGCTISPSNYAALEGRLYCKPHYSQLFKEKGNYS 172
Query: 185 Q 187 Q Sbjct: 173 Q 173
Score = 62.4 bits (150), Expect = 1e-08 Identities = 26/58 (44%), Positives = 41/58 (70%) Frame = +2
Query: 14 VYPLEKVSVEGSAYHKSCFKCLQ*GCSISPSNYAAMEGRLYCKHHFKQLFKEKGNYSQ 187 VY +E+++ +G YHKSCF+C ++ +NYA++EG LYCK HF+QL K G++ + Sbjct: 17 VYLVEQLTADGVVYHKSCFRCNHCKGTLKLANYASLEGVLYCKPHFEQLLKVTGSFDK 74
>tr|A9SY81|A9SY81_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_234444 PE=4 SV=1 Length = 185
Score = 101 bits (252), Expect = 2e-20 Identities = 43/61 (70%), Positives = 52/61 (85%) Frame = +2
Query: 5 ARHVYPLEKVSVEGSAYHKSCFKCLQ*GCSISPSNYAAMEGRLYCKHHFKQLFKEKGNYS 184 ++ VYP++K +VEG YHK CFKC+ GC+ISPSNYAA+EGRLYCK H+ QLFKEKGNYS Sbjct: 113 SKTVYPIDKTTVEGLPYHKHCFKCVHGGCTISPSNYAALEGRLYCKPHYSQLFKEKGNYS 172
Query: 185 Q 187 Q Sbjct: 173 Q 173
Score = 60.1 bits (144), Expect = 5e-08 Identities = 25/58 (43%), Positives = 41/58 (70%) Frame = +2
Query: 14 VYPLEKVSVEGSAYHKSCFKCLQ*GCSISPSNYAAMEGRLYCKHHFKQLFKEKGNYSQ 187 VY +E+++ +G YHKSCF+C ++ ++YA++EG LYCK HF+QL K G++ + Sbjct: 17 VYLVEQLTADGVVYHKSCFRCNHCKGTLKLASYASLEGVLYCKPHFEQLLKLTGSFDK 74
>tr|Q9SP34|Q9SP34_HELAN LIM domain protein PLIM1b OS=Helianthus annuus GN=PLIM1b PE=2 SV=1 Length = 214
Score = 100 bits (249), Expect = 4e-20 Identities = 43/61 (70%), Positives = 52/61 (85%) Frame = +2
Query: 5 ARHVYPLEKVSVEGSAYHKSCFKCLQ*GCSISPSNYAAMEGRLYCKHHFKQLFKEKGNYS 184 A+ VYP+E+V V+G+AYH++CFKC GC+ISPSNY A EGRLYCKHH QLFK+KGNYS Sbjct: 114 AKIVYPIERVKVDGTAYHRACFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLFKKKGNYS 173
Query: 185 Q 187 Q Sbjct: 174 Q 174
Score = 56.2 bits (134), Expect = 8e-07 Identities = 22/55 (40%), Positives = 35/55 (63%) Frame = +2
Query: 14 VYPLEKVSVEGSAYHKSCFKCLQ*GCSISPSNYAAMEGRLYCKHHFKQLFKEKGN 178 VY ++K+ YHK+CF+C ++ SN+ + +G +YC+HHF QLFK G+ Sbjct: 18 VYLVDKLVANQRVYHKACFRCHHCNSTLKLSNFNSFDGVVYCRHHFDQLFKRTGS 72
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