BP917517
Clone id YMU001_000101_G11
Library
Length 472
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000101_G11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GAGACAGCGGTACTTGAACATCAATTCTGAGGCTGTGGCGACTGCCACGAAGGATCTCAA
GCGGATTCTGAATCTGGATTTGTGCAGGATGTGATTTATGGGCTTGTCTCTGTACGATGT
AAAATGTGCTACGGAGGAGACGAGAAAAGTTATCCTTACGGCCAGGTAATGCGAATGGCT
TGCTGGGCTGAGTGATCCAATGTCAGATTTTAAGGCTACCAACTCGAGCTTGTCTTATCT
GGGACATTTCTTGGTTGGGAACTTTTACATGAAACGTGTGAAGGTTCCTGAAGGTTCTTT
GTCCAGAGGCTGTGTACTGAATTCAAAGTGAATGCGAGGATTAAGCATGGGCAGATCGAA
TGCAAAGGAGCATGCGGCGTTGAATGCTGTTTGGGATGGTACTCCGCATCCCTGTGTTTT
GCTACTGTGATGAGAGGAGAAGGTTCAAGAATTGCGTCCAGCTCTGTATAAT
■■Homology search results ■■ -
sp_hit_id Q6ZN11
Definition sp|Q6ZN11|ZN793_HUMAN Zinc finger protein 793 OS=Homo sapiens
Align length 31
Score (bit) 29.6
E-value 6.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917517|Adiantum capillus-veneris mRNA, clone:
YMU001_000101_G11.
(472 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q6ZN11|ZN793_HUMAN Zinc finger protein 793 OS=Homo sapiens GN... 30 6.9

>sp|Q6ZN11|ZN793_HUMAN Zinc finger protein 793 OS=Homo sapiens
GN=ZNF793 PE=2 SV=1
Length = 374

Score = 29.6 bits (65), Expect = 6.9
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +3

Query: 81 CAGCDLWACLCTM*NVLRRRREKLSLRPGNA 173
C GC W + + N+ R+RR+ + LRPG A
Sbjct: 73 CPGCHCWEDIWRV-NIQRKRRQDMLLRPGAA 102


tr_hit_id B8CGK5
Definition tr|B8CGK5|B8CGK5_THAPS Predicted protein OS=Thalassiosira pseudonana CCMP1335
Align length 83
Score (bit) 34.3
E-value 3.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917517|Adiantum capillus-veneris mRNA, clone:
YMU001_000101_G11.
(472 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B8CGK5|B8CGK5_THAPS Predicted protein OS=Thalassiosira pseudo... 34 3.2
tr|Q98SV6|Q98SV6_SCOCA Myostatin (Fragment) OS=Scomberomorus cav... 33 5.4
tr|Q4UAA3|Q4UAA3_THEAN Putative uncharacterized protein OS=Theil... 33 7.1
tr|A8NRK2|A8NRK2_COPC7 Putative uncharacterized protein OS=Copri... 33 7.1

>tr|B8CGK5|B8CGK5_THAPS Predicted protein OS=Thalassiosira pseudonana
CCMP1335 GN=THAPSDRAFT_12140 PE=4 SV=1
Length = 1965

Score = 34.3 bits (77), Expect = 3.2
Identities = 20/83 (24%), Positives = 34/83 (40%)
Frame = -1

Query: 277 TFHVKVPNQEMSQIRQARVGSLKI*HWITQPSKPFALPGRKDNFSRLLRSTFYIVQRQAH 98
T H VPN +M Q+R H+ P + +P +NF + S +H
Sbjct: 1816 TQHHSVPNLKMHSQHQSRSAQQHAPHYQHPPQRGDPIPMHHNNFQPHMLSNLNSSSLDSH 1875

Query: 97 KSHPAQIQIQNPLEILRGSRHSL 29
H + Q N ++G+ H++
Sbjct: 1876 SHHSSTQQFPNQPASIQGNHHTM 1898


>tr|Q98SV6|Q98SV6_SCOCA Myostatin (Fragment) OS=Scomberomorus
cavalla PE=2 SV=1
Length = 239

Score = 33.5 bits (75), Expect = 5.4
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Frame = -1

Query: 160 RKDNFSRLLRSTFYIVQRQAHKSHPAQIQIQNPLEILRGSRH----SLRIDVQVPLS 2
+K SR+LR+ ++ RQA ++ +QI + + GSRH SL+IDV +S
Sbjct: 86 QKFQASRVLRAQLWVYLRQADEATTVFLQISRLMPVADGSRHIRIRSLKIDVSAGVS 142


>tr|Q4UAA3|Q4UAA3_THEAN Putative uncharacterized protein
OS=Theileria annulata GN=TA07195 PE=4 SV=1
Length = 247

Score = 33.1 bits (74), Expect = 7.1
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = +2

Query: 224 SSLSYLGHFLVGNFYMKRVKVPEGSLSRGCVLNSK*MRGLSMGRSNAKEHAALNAVWDGT 403
S + + G +GN +R + GS R C +NS M L + + +N +W+ T
Sbjct: 31 SEIEFEGWIQMGNPVRERTRGCVGSCQRSCSMNSPNMHLLQNDNNCCSNNDVINVLWEHT 90

Query: 404 P 406
P
Sbjct: 91 P 91


>tr|A8NRK2|A8NRK2_COPC7 Putative uncharacterized protein
OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC
9003) GN=CC1G_11707 PE=4 SV=1
Length = 597

Score = 33.1 bits (74), Expect = 7.1
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Frame = -3

Query: 395 PKQHSTPHAPLHSICPCLILAFTLNSV----HSLWTKNLQEPSH 276
PK +STP PL + +++ + +S+ H+LW N+ EP+H
Sbjct: 501 PKVYSTPMHPLAARPGLMVVGYIASSISLLEHALWALNIGEPTH 544