BP917523 |
Clone id |
YMU001_000101_H07 |
Library |
YMU01 |
Length |
484 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000101_H07. |
Accession |
BP917523 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL2819Contig1 |
Sequence |
TGACTTCAGAACAGTATGTATGCATCAAAGAAGAGGTTCTCAAGTACGTACAACATGCGT ATGTGCAGATTCTCACAATGGGAAACGTTACACCTCTAGACACCGTATCGTTTCAAAGGA GGGATGCCCCTACAGCGCACCCAAAGGAGGGATGCCCCTACAGTGCACCCGAGGGAAGGA TGCCCCTACAGAGCACCCGAAAGTCGTGCGTGTAGACGACTTAAGAAAGATGTCAATTCC AGTGGCAGCAGTGGTTTTTGTCAAAATGAAACCCCTAGAAAGGGTGAAAGCACACCATGC AATGTGCTCTTTATTCATCCCCCATATATACAAACGCTCCTTTGCTTTGGTGAAACAGGC AACATGCCACATCCGACTGACCCTGTATGTCATCACAAACATCCCTTCCAGGTCCAACCA TCGATGTGGATCCGCAAAATCAAAACTCTCCAATCAAAAGGGGTATATGCAATCCCTCTC ATAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O35615 |
Definition |
sp|O35615|FOG1_MOUSE Zinc finger protein ZFPM1 OS=Mus musculus |
Align length |
128 |
Score (bit) |
34.3 |
E-value |
0.3 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917523|Adiantum capillus-veneris mRNA, clone: YMU001_000101_H07. (484 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|O35615|FOG1_MOUSE Zinc finger protein ZFPM1 OS=Mus musculus G... 34 0.30 sp|A6NM28|ZFP92_HUMAN Zinc finger protein 92 homolog OS=Homo sap... 31 2.6 sp|P62376|NXS2_HYDCY Short neurotoxin 2 (Fragment) OS=Hydrophis ... 30 4.4 sp|O27112|KORA_METTH 2-oxoglutarate synthase subunit korA OS=Met... 30 4.4 sp|A5N0V1|PROA_CLOK5 Gamma-glutamyl phosphate reductase OS=Clost... 30 5.7 sp|P26661|POLG_HCVJ8 Genome polyprotein OS=Hepatitis C virus gen... 30 5.7 sp|P62388|NXSA_PELPL Pelamitoxin a OS=Pelamis platurus PE=1 SV=1 30 5.7 sp|P62389|NXS5_ENHSC Toxin 5 OS=Enhydrina schistosa PE=1 SV=1 30 5.7 sp|P96315|CR1AF_BACTU Pesticidal crystal protein cry1Af (Fragmen... 30 5.7 sp|Q9DHD6|POLG_HCVJP Genome polyprotein OS=Hepatitis C virus gen... 30 7.5 sp|Q8UW26|NXS2_LAPHA Short neurotoxin 2 OS=Lapemis hardwickii PE... 30 7.5 sp|Q5UFR7|NXS2_ACAPE Short neurotoxin 2 OS=Acalyptophis peronii ... 30 7.5 sp|P68416|NXS1_LAPHA Short neurotoxin 1 OS=Lapemis hardwickii PE... 30 7.5 sp|Q5UFR8|NXS1_ACAPE Short neurotoxin 1 OS=Acalyptophis peronii ... 30 7.5 sp|Q8UW27|NXS16_LAPHA Short neurotoxin SN160 OS=Lapemis hardwick... 30 7.5 sp|O73606|KCNG2_CHICK Potassium voltage-gated channel subfamily ... 30 7.5 sp|Q7T384|SC5AC_DANRE Sodium-coupled monocarboxylate transporter... 29 9.8 sp|Q6J2U6|RN114_RAT RING finger protein 114 OS=Rattus norvegicus... 29 9.8 sp|P68414|NXSA_ACAPE Short neurotoxin 1 OS=Acalyptophis peronii ... 29 9.8 sp|P68413|NXS1_HYDOR Short neurotoxin 1 OS=Hydrophis ornatus PE=... 29 9.8 sp|P25494|NXS1_HYDCY Short neurotoxin 1 OS=Hydrophis cyanocinctu... 29 9.8 sp|P68415|NXS1_ENHSC Short neurotoxin 1 OS=Enhydrina schistosa P... 29 9.8 sp|P68412|NXS1_ASTST Short neurotoxin 1 OS=Astrotia stokesii PE=... 29 9.8 sp|P0A370|CR1AB_BACTK Pesticidal crystal protein cry1Ab OS=Bacil... 29 9.8 sp|P0A371|CR1AB_BACTB Pesticidal crystal protein cry1Ab OS=Bacil... 29 9.8 sp|P0A372|CR1AB_BACTA Pesticidal crystal protein cry1Ab OS=Bacil... 29 9.8
>sp|O35615|FOG1_MOUSE Zinc finger protein ZFPM1 OS=Mus musculus GN=Zfpm1 PE=1 SV=1 Length = 995
Score = 34.3 bits (77), Expect = 0.30 Identities = 30/128 (23%), Positives = 48/128 (37%), Gaps = 3/128 (2%) Frame = +1
Query: 103 PYRFKGGMPLQRTQRRDAPTVHPRE--GCPYRAPESRACRRLKKDVNSSGSSGFCQNETP 276 P R G + R +P PRE PE+ A R + S GSS + P Sbjct: 634 PARAPAGAAAEPDPSRSSPGPGPREEEASGTTTPEAEAAGRGSEGSQSPGSSVDDAEDDP 693
Query: 277 RKGESTPCNVLFI-HPPYIQTLLCFGETGNMPHPTDPVCHHKHPFQVQPSMWIRKIKTLQ 453 + CN+ F H Y + + + P P P P P++ ++T + Sbjct: 694 SRTLCEACNIRFSRHETYTVHKRYYCASRHDPPPRRPPAPTTAPGPAAPALTAPPVRTRR 753
Query: 454 SKGVYAIP 477 + +Y +P Sbjct: 754 RRKLYELP 761
>sp|A6NM28|ZFP92_HUMAN Zinc finger protein 92 homolog OS=Homo sapiens GN=ZFP92 PE=2 SV=3 Length = 416
Score = 31.2 bits (69), Expect = 2.6 Identities = 34/146 (23%), Positives = 60/146 (41%), Gaps = 5/146 (3%) Frame = +2
Query: 32 RGSQVRTTCV-CADSHNGKRYTSRHRIVSKEGCPYSAPKGGMPLQCTRGKDAPTEHPKVV 208 +G++ R C C + + +HRI+ PY+ P+ G + R A EH ++ Sbjct: 146 KGAEKRYLCQQCGKAFSRSSNLIKHRIIHSGEKPYACPECG---KLFRRSFALLEHQRIH 202
Query: 209 RVDDLRKMSIPVAAVVFVKMKPLERVKAHHAMCSLF----IPHIYKRSFALVKQATCHIR 376 + + + P + F + L + + H+ F +++RSFAL++ A H Sbjct: 203 SGE--KPYACPECSKTFTRSSNLIKHQVIHSGERPFACGDCGKLFRRSFALLEHARVHSG 260
Query: 377 LTLYVITNIPSRSNHRCGSAKSKLSN 454 Y CG A S+ SN Sbjct: 261 ERPYACP--------ECGKAFSRSSN 278
>sp|P62376|NXS2_HYDCY Short neurotoxin 2 (Fragment) OS=Hydrophis cyanocinctus PE=1 SV=2 Length = 79
Score = 30.4 bits (67), Expect = 4.4 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Frame = +2
Query: 5 FRTVCMHQRRGSQVRTTCVCADSHNGKRYTSRHRIVSKE-GCPYSAPKGGMPLQC 166 + C +Q+ SQ +TT CA+S K+ S HR E GC K G+ L+C Sbjct: 18 YTMTCCNQQ-SSQPKTTTNCAESSCYKKTWSDHRGTRIERGCGCPQVKSGIKLEC 71
>sp|O27112|KORA_METTH 2-oxoglutarate synthase subunit korA OS=Methanobacterium thermoautotrophicum GN=korA PE=3 SV=3 Length = 376
Score = 30.4 bits (67), Expect = 4.4 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = +3
Query: 87 VTPLDTVSFQRRDAPTAHPKEGCPYSAPEGRMP 185 +T D V ++R P+ P+E P+SAPE +P Sbjct: 180 ITIPDRVKIRKRRGPSVPPEEFLPFSAPEDGVP 212
>sp|A5N0V1|PROA_CLOK5 Gamma-glutamyl phosphate reductase OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=proA PE=3 SV=1 Length = 418
Score = 30.0 bits (66), Expect = 5.7 Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 7/82 (8%) Frame = -2
Query: 363 VACFTKAKERLYIWGM-NKEHIAWCAFTLSRGFILTKTTAATGIDIFLKSSTRTT----- 202 V+ +A + +Y +G + E I +T S+ F+ AA +++ +STR T Sbjct: 324 VSSLDEALDHIYKYGTKHSEAIITNDYTSSQRFLREVDAAA----VYVNASTRFTDGEEF 379
Query: 201 -FGCSVGASFPRVHCRGIPPLG 139 FG +G S ++H RG P+G Sbjct: 380 GFGAEIGISTQKLHARG--PMG 399
>sp|P26661|POLG_HCVJ8 Genome polyprotein OS=Hepatitis C virus genotype 2b (isolate HC-J8) PE=1 SV=3 Length = 3033
Score = 30.0 bits (66), Expect = 5.7 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 3/34 (8%) Frame = -2
Query: 375 RMWHVAC---FTKAKERLYIWGMNKEHIAWCAFT 283 R+WH C FT K R+Y+ G+ A C FT Sbjct: 618 RLWHYPCTVNFTIFKARMYVGGVEHRFSAACNFT 651
>sp|P62388|NXSA_PELPL Pelamitoxin a OS=Pelamis platurus PE=1 SV=1 Length = 60
Score = 30.0 bits (66), Expect = 5.7 Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Frame = +2
Query: 17 CMHQRRGSQVRTTCVCADSHNGKRYTSRHRIVSKE-GCPYSAPKGGMPLQC 166 C +Q+ SQ +TT CA+S K+ S HR E GC K G+ L+C Sbjct: 3 CCNQQ-SSQPKTTTNCAESSCYKKTWSDHRGTRIERGCGCPQVKSGIKLEC 52
>sp|P62389|NXS5_ENHSC Toxin 5 OS=Enhydrina schistosa PE=1 SV=1 Length = 60
Score = 30.0 bits (66), Expect = 5.7 Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Frame = +2
Query: 17 CMHQRRGSQVRTTCVCADSHNGKRYTSRHRIVSKE-GCPYSAPKGGMPLQC 166 C +Q+ SQ +TT CA+S K+ S HR E GC K G+ L+C Sbjct: 3 CCNQQ-SSQPKTTTNCAESSCYKKTWSDHRGTRIERGCGCPQVKSGIKLEC 52
>sp|P96315|CR1AF_BACTU Pesticidal crystal protein cry1Af (Fragment) OS=Bacillus thuringiensis GN=cry1Af PE=2 SV=1 Length = 911
Score = 30.0 bits (66), Expect = 5.7 Identities = 15/45 (33%), Positives = 24/45 (53%) Frame = +2
Query: 59 VCADSHNGKRYTSRHRIVSKEGCPYSAPKGGMPLQCTRGKDAPTE 193 + D+H G+ Y S H+I++ +S P+ PL T G AP + Sbjct: 302 IYTDAHRGEYYWSGHQIMASP-VGFSGPEFTFPLYGTMGNSAPQQ 345
>sp|Q9DHD6|POLG_HCVJP Genome polyprotein OS=Hepatitis C virus genotype 2b (isolate JPUT971017) PE=3 SV=3 Length = 3033
Score = 29.6 bits (65), Expect = 7.5 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 3/34 (8%) Frame = -2
Query: 375 RMWHVAC---FTKAKERLYIWGMNKEHIAWCAFT 283 R+WH C FT K R+Y+ G+ A C FT Sbjct: 618 RLWHYPCTVNFTIFKVRMYVGGVEHRFSAACNFT 651
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B2WK67 |
Definition |
tr|B2WK67|B2WK67_PYRTR Putative uncharacterized protein OS=Pyrenophora tritici-repentis (strain Pt-1C-BFP) |
Align length |
51 |
Score (bit) |
32.3 |
E-value |
0.95 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917523|Adiantum capillus-veneris mRNA, clone: YMU001_000101_H07. (484 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B2WK67|B2WK67_PYRTR Putative uncharacterized protein OS=Pyren... 32 0.95 tr|Q4RI05|Q4RI05_TETNG Chromosome 8 SCAF15044, whole genome shot... 36 1.1 tr|B6SZ67|B6SZ67_MAIZE Calmodulin binding protein OS=Zea mays PE... 35 2.4 tr|A1DG60|A1DG60_NEOFI DDHD domain protein OS=Neosartorya fische... 34 3.1 tr|Q84RC8|Q84RC8_ARATH Putative uncharacterized protein At2g1471... 34 4.1 tr|O80980|O80980_ARATH Putative uncharacterized protein At2g1471... 34 4.1 tr|B4I428|B4I428_DROSE GM10616 OS=Drosophila sechellia GN=GM1061... 34 4.1 tr|B3RL80|B3RL80_TRIAD Predicted protein OS=Trichoplax adhaerens... 34 4.1 tr|Q9XVM1|Q9XVM1_CAEEL Protein F58G11.5, confirmed by transcript... 33 9.1 tr|A3MVA7|A3MVA7_PYRCJ Putative uncharacterized protein OS=Pyrob... 33 9.1
>tr|B2WK67|B2WK67_PYRTR Putative uncharacterized protein OS=Pyrenophora tritici-repentis (strain Pt-1C-BFP) GN=PTRG_10256 PE=4 SV=1 Length = 405
Score = 32.3 bits (72), Expect(2) = 0.95 Identities = 17/51 (33%), Positives = 21/51 (41%), Gaps = 2/51 (3%) Frame = +1
Query: 259 CQNETPRKGESTPCNVLFIHP--PYIQTLLCFGETGNMPHPTDPVCHHKHP 405 C+ ET P + HP P T C ET + PHP P+ HP Sbjct: 143 CEEETTSTHPVVPMKMTSFHPAPPAETTTPCEEETTSTPHPVVPMTTQSHP 193
Score = 22.7 bits (47), Expect(2) = 0.95 Identities = 8/24 (33%), Positives = 12/24 (50%) Frame = +3
Query: 381 PCMSSQTSLPGPTIDVDPQNQNSP 452 PC TS P P + + Q+ +P Sbjct: 233 PCEEESTSTPHPVVPMTTQSHPAP 256
>tr|Q4RI05|Q4RI05_TETNG Chromosome 8 SCAF15044, whole genome shotgun sequence. (Fragment) OS=Tetraodon nigroviridis GN=GSTENG00034093001 PE=4 SV=1 Length = 1689
Score = 35.8 bits (81), Expect = 1.1 Identities = 33/112 (29%), Positives = 46/112 (41%), Gaps = 12/112 (10%) Frame = +1
Query: 136 RTQRRDAPTVHPRE----GCPYRAPESRACRRLKKDVNSSGSSGFCQNETPRKGESTPCN 303 R+Q +A VH R G Y APE R+ + K + G N G+S C+ Sbjct: 261 RSQEPEAQMVHHRRSQVIGDTYVAPELRSKTQFLKSPKGAYKGG--NNGAGGGGKSAKCH 318
Query: 304 VLFIHPPYIQTLLCFG--------ETGNMPHPTDPVCHHKHPFQVQPSMWIR 435 HPP +Q L G + ++PH HH+HP Q S +R Sbjct: 319 GY--HPP-LQAALHSGAGAGHGGQDVYHLPHQGQSSGHHQHPLQYSHSKRVR 367
>tr|B6SZ67|B6SZ67_MAIZE Calmodulin binding protein OS=Zea mays PE=2 SV=1 Length = 406
Score = 34.7 bits (78), Expect = 2.4 Identities = 17/39 (43%), Positives = 23/39 (58%) Frame = +2
Query: 260 VKMKPLERVKAHHAMCSLFIPHIYKRSFALVKQATCHIR 376 V++KPL AH M S IY+RS +V+ TCH+R Sbjct: 169 VQVKPLATAPAHRRMLSDSSDSIYERSPRIVEMDTCHLR 207
>tr|A1DG60|A1DG60_NEOFI DDHD domain protein OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL 181) GN=NFIA_083180 PE=4 SV=1 Length = 821
Score = 34.3 bits (77), Expect = 3.1 Identities = 34/123 (27%), Positives = 49/123 (39%), Gaps = 2/123 (1%) Frame = +1
Query: 115 KGGMPLQRTQRRDAPTVHPREGCPYRAPESRACRRLKKDVNSSGSSGFCQNETPRKGEST 294 KG R+ A +EGC +R P S + V +S +SG E P S Sbjct: 566 KGNTIAGRSMIDGANMKRSKEGCDHRNPTSSSSASCGAPVQASTASG----EGPTIVSSP 621
Query: 295 PCNVLFIHPPYIQTLLCFGETGNMPHPTDPVCHHKHPFQVQPSMWIRKIKTLQS--KGVY 468 C L+ N+ HP+DPV + P + P+M K + L S K ++ Sbjct: 622 KCRQLY----------------NIFHPSDPVSYRIEPL-ISPAMSSLKPQPLPSVKKSLW 664
Query: 469 AIP 477 A P Sbjct: 665 AAP 667
>tr|Q84RC8|Q84RC8_ARATH Putative uncharacterized protein At2g14710 OS=Arabidopsis thaliana GN=At2g14710 PE=2 SV=1 Length = 362
Score = 33.9 bits (76), Expect = 4.1 Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 5/57 (8%) Frame = +1
Query: 280 KGESTPCNVLFIHPPYIQTLLCFGETGNM-----PHPTDPVCHHKHPFQVQPSMWIR 435 K +ST N I+ +QT +C GN+ TDP+C+H H F S+W+R Sbjct: 162 KSKSTNSNTNVIN---VQTAVCLN--GNLYWVCFREKTDPLCYHIHKFGFSNSIWVR 213
>tr|O80980|O80980_ARATH Putative uncharacterized protein At2g14710 (Putative uncharacterized protein) OS=Arabidopsis thaliana GN=At2g14710 PE=4 SV=1 Length = 362
Score = 33.9 bits (76), Expect = 4.1 Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 5/57 (8%) Frame = +1
Query: 280 KGESTPCNVLFIHPPYIQTLLCFGETGNM-----PHPTDPVCHHKHPFQVQPSMWIR 435 K +ST N I+ +QT +C GN+ TDP+C+H H F S+W+R Sbjct: 162 KSKSTNSNTNVIN---VQTAVCLN--GNLYWVCFREKTDPLCYHIHKFGFSNSIWVR 213
>tr|B4I428|B4I428_DROSE GM10616 OS=Drosophila sechellia GN=GM10616 PE=4 SV=1 Length = 2282
Score = 33.9 bits (76), Expect = 4.1 Identities = 26/76 (34%), Positives = 37/76 (48%) Frame = +1
Query: 73 SQWETLHL*TPYRFKGGMPLQRTQRRDAPTVHPREGCPYRAPESRACRRLKKDVNSSGSS 252 S WE L + P F+ + L T+ + +P + P + P S+ L+KDVN SGS Sbjct: 980 SDWEELDIDKPKEFEKAL-LTETEAQVSP-----KRAPSKRPASKKDTSLEKDVNESGS- 1032
Query: 253 GFCQNETPRKGESTPC 300 +NE R TPC Sbjct: 1033 ---ENEQDR--SYTPC 1043
>tr|B3RL80|B3RL80_TRIAD Predicted protein OS=Trichoplax adhaerens GN=TRIADDRAFT_51909 PE=4 SV=1 Length = 286
Score = 33.9 bits (76), Expect = 4.1 Identities = 13/33 (39%), Positives = 21/33 (63%) Frame = +2
Query: 89 YTSRHRIVSKEGCPYSAPKGGMPLQCTRGKDAP 187 +T RHR ++ G P+++P GMP+ TR + P Sbjct: 158 FTYRHRYINSRGRPFNSPSSGMPVPGTRITNPP 190
>tr|Q9XVM1|Q9XVM1_CAEEL Protein F58G11.5, confirmed by transcript evidence OS=Caenorhabditis elegans GN=tag-65 PE=2 SV=2 Length = 675
Score = 32.7 bits (73), Expect = 9.1 Identities = 20/65 (30%), Positives = 28/65 (43%) Frame = +1
Query: 103 PYRFKGGMPLQRTQRRDAPTVHPREGCPYRAPESRACRRLKKDVNSSGSSGFCQNETPRK 282 P + +R+ R P H R P R+P R RR + NSS SSG + Sbjct: 507 PENLREDSEARRSNSRSPPRDHKRSRSPSRSPSPR--RRQRSSSNSSRSSGSSSRSSSSS 564
Query: 283 GESTP 297 +S+P Sbjct: 565 RKSSP 569
>tr|A3MVA7|A3MVA7_PYRCJ Putative uncharacterized protein OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=Pcal_1149 PE=4 SV=1 Length = 378
Score = 32.7 bits (73), Expect = 9.1 Identities = 19/70 (27%), Positives = 31/70 (44%) Frame = -2
Query: 372 MWHVACFTKAKERLYIWGMNKEHIAWCAFTLSRGFILTKTTAATGIDIFLKSSTRTTFGC 193 +W +AKER K+ AW ++ G I+ K + I +K +T +G Sbjct: 123 IWRRIQLREAKERTGAALRLKDVFAWRTASILIGDIIAKALGIPNVVIAVKHPAKTIYGV 182
Query: 192 SVGASFPRVH 163 S+G PR + Sbjct: 183 SIGGRRPRFY 192
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