BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917527|Adiantum capillus-veneris mRNA, clone:
YMU001_000102_A02.
         (491 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O29622|SYI_ARCFU Isoleucyl-tRNA synthetase OS=Archaeoglobus f...    31   2.7  
sp|Q6YR34|SYI_ONYPE Isoleucyl-tRNA synthetase OS=Onion yellows p...    31   3.5  
sp|Q9N2V9|PDE6_CAEEL Probable 3',5'-cyclic phosphodiesterase pde...    30   5.9  
sp|Q3AEP2|SYI_CARHZ Isoleucyl-tRNA synthetase OS=Carboxydothermu...    30   7.8  

>sp|O29622|SYI_ARCFU Isoleucyl-tRNA synthetase OS=Archaeoglobus
           fulgidus GN=ileS PE=3 SV=1
          Length = 1018

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 11/40 (27%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
 Frame = -2

Query: 115 YGHLWQ--QPKLAKGVSQWILCHKAIQQQVLKEFHKSLWV 2
           YGH W+   P + +   QW +    ++ ++L+E  K +W+
Sbjct: 388 YGHCWRCKTPIIYRATEQWFIKISELKDEMLEEIDKVMWI 427


>sp|Q6YR34|SYI_ONYPE Isoleucyl-tRNA synthetase OS=Onion yellows
           phytoplasma GN=ileS PE=3 SV=1
          Length = 900

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 5/75 (6%)
 Frame = -2

Query: 211 IGRYLG---TLENQDY*SDVELKKI*KKAYGYFLNYGHLWQ--QPKLAKGVSQWILCHKA 47
           + +Y G   T  N+   SD+E      KA     +Y H W+  +P ++  + QW +  K 
Sbjct: 357 VSKYQGLFYTKANEAIISDLEKDHSLLKADVILHSYPHDWRTKKPVISLALPQWFVSIKK 416

Query: 46  IQQQVLKEFHKSLWV 2
           I+  +L+E  K  W+
Sbjct: 417 IKSLLLEETQKVKWI 431


>sp|Q9N2V9|PDE6_CAEEL Probable 3',5'-cyclic phosphodiesterase pde-6
           OS=Caenorhabditis elegans GN=pde-6 PE=2 SV=1
          Length = 760

 Score = 30.0 bits (66), Expect = 5.9
 Identities = 25/89 (28%), Positives = 36/89 (40%), Gaps = 5/89 (5%)
 Frame = +2

Query: 221 LTIIHRLS-KCFKHLSSRTSISMN----EMMYRNSNPHHHSLLASPRHLHT*LETTCQQL 385
           LT+ H  +   F  LS    I M     EM+       H   LA    +H   +   +Q 
Sbjct: 582 LTLQHNANVNIFSSLSREEFIQMRHAMVEMVLATDISRHFEYLAKFNKMHV-TDVPEEQR 640

Query: 386 DYLSGNVMNFMVKCFSKSNPWKHSNICYR 472
           D  S  + + +VKC   SNP +   +C R
Sbjct: 641 DTNSLTICDMLVKCADISNPAREWGLCQR 669


>sp|Q3AEP2|SYI_CARHZ Isoleucyl-tRNA synthetase OS=Carboxydothermus
           hydrogenoformans (strain Z-2901 / DSM 6008) GN=ileS PE=3
           SV=1
          Length = 925

 Score = 29.6 bits (65), Expect = 7.8
 Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
 Frame = -2

Query: 118 NYGHLWQ--QPKLAKGVSQWILCHKAIQQQVLKEFHKSLWV 2
           +Y H W+   P + +   QW       ++Q LKE  K  W+
Sbjct: 391 SYPHCWRCKNPVIFRATEQWFASIDGFREQALKEIEKVEWI 431

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917527|Adiantum capillus-veneris mRNA, clone:
YMU001_000102_A02.
         (491 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9SEB1|A9SEB1_PHYPA Predicted protein (Fragment) OS=Physcomit...    36   0.84 
tr|B6N423|B6N423_BRAFL Putative uncharacterized protein OS=Branc...    34   3.2  
tr|B6N407|B6N407_BRAFL Putative uncharacterized protein OS=Branc...    34   3.2  
tr|Q4Y1A2|Q4Y1A2_PLACH Putative uncharacterized protein (Fragmen...    33   5.5  
tr|Q6FA82|Q6FA82_ACIAD Sensor protein OS=Acinetobacter sp. (stra...    33   7.1  

>tr|A9SEB1|A9SEB1_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_46806 PE=4 SV=1
          Length = 75

 Score = 36.2 bits (82), Expect = 0.84
 Identities = 17/31 (54%), Positives = 21/31 (67%)
 Frame = -2

Query: 490 GMIALCSIANIAMLPWIAFTKTLNHEIHHIT 398
           GMI   S  +IAML WIA+ K+LN E  H+T
Sbjct: 34  GMITNWSTPDIAMLRWIAYIKSLNLEFKHVT 64


>tr|B6N423|B6N423_BRAFL Putative uncharacterized protein
           OS=Branchiostoma floridae GN=BRAFLDRAFT_125867 PE=4 SV=1
          Length = 1346

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 21/82 (25%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
 Frame = +2

Query: 113 IIQEVAISLLSNLLELY--ITSIILVLKCAKIATNNWPLTIIHRLSKCFKHLSSRTSISM 286
           +++ V + L   +LE Y  I S+I  L C+ ++ N W   +++ L + FK ++      M
Sbjct: 634 VLKVVGLVLRQQVLEFYEEILSLIYSLTCSSVSQNMWQ--VLYLLYENFKEVAFDYFTEM 691

Query: 287 NEMMYRNSNPHHHSLLASPRHL 352
              ++        + L+SP+HL
Sbjct: 692 MPCLHNYITVDTQAFLSSPKHL 713


>tr|B6N407|B6N407_BRAFL Putative uncharacterized protein
           OS=Branchiostoma floridae GN=BRAFLDRAFT_125858 PE=4 SV=1
          Length = 980

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 21/82 (25%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
 Frame = +2

Query: 113 IIQEVAISLLSNLLELY--ITSIILVLKCAKIATNNWPLTIIHRLSKCFKHLSSRTSISM 286
           +++ V + L   +LE Y  I S+I  L C+ ++ N W   +++ L + FK ++      M
Sbjct: 571 VLKVVGLVLRQQVLEFYEEILSLIYSLTCSSVSQNMWQ--VLYLLYENFKEVAFDYFTEM 628

Query: 287 NEMMYRNSNPHHHSLLASPRHL 352
              ++        + L+SP+HL
Sbjct: 629 MPCLHNYITVDTQAFLSSPKHL 650


>tr|Q4Y1A2|Q4Y1A2_PLACH Putative uncharacterized protein (Fragment)
            OS=Plasmodium chabaudi GN=PC000939.01.0 PE=4 SV=1
          Length = 1371

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 13/41 (31%), Positives = 24/41 (58%)
 Frame = -2

Query: 142  KKAYGYFLNYGHLWQQPKLAKGVSQWILCHKAIQQQVLKEF 20
            KK Y  F+ YG   + PK+ K    +++C++A + + L E+
Sbjct: 1314 KKKYSNFVKYGEKTKSPKMGKYYENFLMCYRANKHKNLHEY 1354


>tr|Q6FA82|Q6FA82_ACIAD Sensor protein OS=Acinetobacter sp. (strain
           ADP1) GN=ACIAD2238 PE=4 SV=1
          Length = 449

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
 Frame = -2

Query: 193 TLENQDY*SDVELKKI*KKAYGYFLNYGHLWQQPKLAKGVSQW-ILCHKAIQQQVLKEFH 17
           TL   D+  D+   +  +K YGYF + G LW+  +  K  S+  ++  + I+ +  + F 
Sbjct: 85  TLTYSDHHDDIAHTQHLEKGYGYFFHQGELWRSYEAEKNKSELKVMVIQPIKARFSEVFQ 144

Query: 16  KSLW 5
             LW
Sbjct: 145 SILW 148