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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP917532
Clone id YMU001_000102_A07
Library
Length 410
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000102_A07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CCACTCCCCATGTAGTTGCTCACACTGGTGTAGGTCTTGGGAATCTCATCCCATTTACAT
TTTAAGGCGTCGAGATGGCCGCATGTCTGTGACCCATTCTCGAATATTTCATTTAAGCTT
GGGCTCTGAGAAGCATACATTAGCGTGCTGCTGGAGGAAGCAACATCAACATTACAATGT
GCCCCTCCTCCTGAGGCAGCATTGGTGCTTTGCAGCACCAAATGCCTTGAAAGCATGGAA
TATGCCCCATTATCTTTGTACTCACGTGCCTTCAGAACACTAAGTTTTCCTCTACTCGAA
GAAGCACTAGATTGGTCACTTCTGCATTCAGAAGCCTTGTCATTGCCGCTGAGGCCTCTG
CCGCTTGGACTAGCACAATCCTCTTTGCAGCTAAGCTGCTTGTTAATACC
■■Homology search results ■■ -
sp_hit_id Q58960
Definition sp|Q58960|Y1565_METJA Uncharacterized protein MJ1565 OS=Methanocaldococcus jannaschii
Align length 67
Score (bit) 33.1
E-value 0.45
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917532|Adiantum capillus-veneris mRNA, clone:
YMU001_000102_A07.
         (410 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q58960|Y1565_METJA Uncharacterized protein MJ1565 OS=Methanoc...    33   0.45 
sp|P16395|ACM1_DROME Muscarinic acetylcholine receptor DM1 OS=Dr...    33   0.45 
sp|O22042|M3K3_ARATH Mitogen-activated protein kinase kinase kin...    31   1.7  
sp|Q8K1S2|UNC5D_MOUSE Netrin receptor UNC5D OS=Mus musculus GN=U...    31   2.2  
sp|Q6UXZ4|UNC5D_HUMAN Netrin receptor UNC5D OS=Homo sapiens GN=U...    30   2.9  
sp|A4IGY6|S39AE_XENTR Zinc transporter ZIP14 OS=Xenopus tropical...    29   6.5  
sp|P32313|OPSR_CARAU Red-sensitive opsin OS=Carassius auratus PE...    29   6.5  
sp|O14092|HEM1_SCHPO 5-aminolevulinate synthase, mitochondrial O...    29   6.5  
sp|Q9VYD1|C1716_DROME Probable histone-lysine N-methyltransferas...    29   6.5  

>sp|Q58960|Y1565_METJA Uncharacterized protein MJ1565
           OS=Methanocaldococcus jannaschii GN=MJ1565 PE=4 SV=1
          Length = 513

 Score = 33.1 bits (74), Expect = 0.45
 Identities = 20/67 (29%), Positives = 30/67 (44%)
 Frame = -1

Query: 272 KAREYKDNGAYSMLSRHLVLQSTNAASGGGAHCNVDVASSSSTLMYASQSPSLNEIFENG 93
           K RE++DN +Y +L +  VL      +  GA     V       +Y +    L ++F NG
Sbjct: 67  KIREFEDNSSYYILGKIKVLGDIRDLNKDGALKLPRVPPKPGIPIYRADDELLKKVFGNG 126

Query: 92  SQTCGHL 72
               GHL
Sbjct: 127 HLKIGHL 133


>sp|P16395|ACM1_DROME Muscarinic acetylcholine receptor DM1
           OS=Drosophila melanogaster GN=mAcR-60C PE=2 SV=2
          Length = 805

 Score = 33.1 bits (74), Expect = 0.45
 Identities = 17/42 (40%), Positives = 24/42 (57%)
 Frame = -1

Query: 209 STNAASGGGAHCNVDVASSSSTLMYASQSPSLNEIFENGSQT 84
           S+NAA+GGG       A+S+S  M    +PS+  I E+G  T
Sbjct: 583 SSNAANGGGGGPGAGAAASASLSMQGDCAPSIKMIHEDGPTT 624


>sp|O22042|M3K3_ARATH Mitogen-activated protein kinase kinase kinase
           3 OS=Arabidopsis thaliana GN=ANP3 PE=1 SV=1
          Length = 651

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 19/56 (33%), Positives = 27/56 (48%)
 Frame = -1

Query: 176 CNVDVASSSSTLMYASQSPSLNEIFENGSQTCGHLDALKCKWDEIPKTYTSVSNYM 9
           CN++   ++      SQS  LN+ F   +  C   D   CK+DE PK   S SN +
Sbjct: 418 CNIESVRNN----VLSQSTDLNKSF---NPMCDSTDNWSCKFDESPKVMKSKSNLL 466


>sp|Q8K1S2|UNC5D_MOUSE Netrin receptor UNC5D OS=Mus musculus GN=Unc5d
            PE=2 SV=1
          Length = 956

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
 Frame = -1

Query: 242  YSMLSRHLVLQSTNAASGGGAHCNVDVASSSSTLMY----ASQSPSLNEIFENGSQTCGH 75
            YS+  R      T  A G          S +  L Y    +S S  +  ++E   Q  G 
Sbjct: 858  YSIRQRICATFDTPNAKGKDWQMLAQKNSINRNLSYFATQSSPSAVILNLWEARHQQDGD 917

Query: 74   LDALKCKWDEIPKTYTSVSN 15
            LD+L C  +EI +T+T +SN
Sbjct: 918  LDSLACALEEIGRTHTKLSN 937


>sp|Q6UXZ4|UNC5D_HUMAN Netrin receptor UNC5D OS=Homo sapiens GN=UNC5D
            PE=1 SV=1
          Length = 953

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
 Frame = -1

Query: 242  YSMLSRHLVLQSTNAASGGGAHCNVDVASSSSTLMY----ASQSPSLNEIFENGSQTCGH 75
            YS+  R      T  A G          S +  L Y    +S S  +  ++E   Q  G 
Sbjct: 855  YSIRQRICATFDTPNAKGKDWQMLAQKNSINRNLSYFATQSSPSAVILNLWEARHQHDGD 914

Query: 74   LDALKCKWDEIPKTYTSVSN 15
            LD+L C  +EI +T+T +SN
Sbjct: 915  LDSLACALEEIGRTHTKLSN 934


>sp|A4IGY6|S39AE_XENTR Zinc transporter ZIP14 OS=Xenopus tropicalis
           GN=slc39a14 PE=2 SV=1
          Length = 462

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 18/61 (29%), Positives = 28/61 (45%)
 Frame = -1

Query: 266 REYKDNGAYSMLSRHLVLQSTNAASGGGAHCNVDVASSSSTLMYASQSPSLNEIFENGSQ 87
           + Y +N + SM     +L++     GGG   N+    SSSTL  A    S + +   G Q
Sbjct: 37  QRYGENESLSMPQLQSLLENLEVGKGGGNQRNMSQCLSSSTLFAAHNLTSGSVVDAEGFQ 96

Query: 86  T 84
           +
Sbjct: 97  S 97


>sp|P32313|OPSR_CARAU Red-sensitive opsin OS=Carassius auratus PE=1
           SV=1
          Length = 357

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = +1

Query: 73  RWPHVCDPFSNISFKLGL*EAYISVLLEEATSTLQCAPP 189
           RW  VC PF N+ F      A   ++     S + CAPP
Sbjct: 148 RWVVVCKPFGNVKFDAKW--ASAGIIFSWVWSAIWCAPP 184


>sp|O14092|HEM1_SCHPO 5-aminolevulinate synthase, mitochondrial
           OS=Schizosaccharomyces pombe GN=hem1 PE=2 SV=1
          Length = 558

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 17/89 (19%)
 Frame = -1

Query: 221 LVLQSTNAASGGGAHCNVDVASSSSTLMYASQSPSLNEIF------ENGSQTCGHLDALK 60
           +V  +   A+  GA  +    S S  +   +  PSL+EI         GS+TC H DA+K
Sbjct: 40  VVRHALPVAAATGADVSRGFKSDSKQM---AMEPSLDEIHLKAGVVNTGSRTCRHADAVK 96

Query: 59  C-----------KWDEIPKTYTSVSNYMG 6
                       K  ++PK Y S  N +G
Sbjct: 97  AAAEAATTTPVTKKHQMPKHYASDLNGVG 125


>sp|Q9VYD1|C1716_DROME Probable histone-lysine N-methyltransferase
           CG1716 OS=Drosophila melanogaster GN=Set2 PE=1 SV=2
          Length = 2313

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 23/57 (40%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
 Frame = +1

Query: 154 EEATSTLQCAPPP--EAALVLCSTKCLESMEYAPLSLYSRAFRTLSFPLLEEALDWS 318
           EE  +T+Q A PP  E A   CS+    S   APLS  SR  +TL     E A + S
Sbjct: 394 EEEDATVQRATPPGKEPAADSCSSAPRRSRRSAPLSGSSRQGKTLEETFAEIAAESS 450
tr_hit_id Q9XID0
Definition tr|Q9XID0|Q9XID0_ARATH F23M19.8 protein OS=Arabidopsis thaliana
Align length 59
Score (bit) 35.8
E-value 1.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917532|Adiantum capillus-veneris mRNA, clone:
YMU001_000102_A07.
         (410 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9XID0|Q9XID0_ARATH F23M19.8 protein OS=Arabidopsis thaliana ...    36   1.1  
tr|A7S2E2|A7S2E2_NEMVE Predicted protein OS=Nematostella vectens...    35   2.5  
tr|A8WG41|A8WG41_DANRE Hhat protein OS=Danio rerio GN=hhat PE=2 ...    33   7.1  
tr|Q1ECB8|Q1ECB8_DROME IP02907p OS=Drosophila melanogaster GN=mA...    33   7.1  
tr|B4QBX9|B4QBX9_DROSI GD24962 OS=Drosophila simulans GN=GD24962...    33   7.1  
tr|B4IHF2|B4IHF2_DROSE GM11841 OS=Drosophila sechellia GN=GM1184...    33   7.1  
tr|A7S0F4|A7S0F4_NEMVE Predicted protein (Fragment) OS=Nematoste...    33   7.1  
tr|B4J8B8|B4J8B8_DROGR GH19985 OS=Drosophila grimshawi GN=GH1998...    33   9.3  
tr|B6HGA1|B6HGA1_PENCH Pc20g11670 protein OS=Penicillium chrysog...    33   9.3  

>tr|Q9XID0|Q9XID0_ARATH F23M19.8 protein OS=Arabidopsis thaliana
            GN=At1g34260 PE=4 SV=1
          Length = 1456

 Score = 35.8 bits (81), Expect = 1.1
 Identities = 19/59 (32%), Positives = 30/59 (50%)
 Frame = +1

Query: 139  ISVLLEEATSTLQCAPPPEAALVLCSTKCLESMEYAPLSLYSRAFRTLSFPLLEEALDW 315
            +S    E+T+ L+  PPPE  +   S K +   +Y+ +SLY+  FR L        LD+
Sbjct: 1148 VSRFSSESTNRLETLPPPEVLVTFGSVKSVGKPKYSIVSLYADDFRDLRKRCCSSELDY 1206


>tr|A7S2E2|A7S2E2_NEMVE Predicted protein OS=Nematostella vectensis
           GN=v1g205728 PE=4 SV=1
          Length = 392

 Score = 34.7 bits (78), Expect = 2.5
 Identities = 28/107 (26%), Positives = 41/107 (38%), Gaps = 10/107 (9%)
 Frame = +2

Query: 2   HSPCSCSHWCRSW-ESHPIYI--LRRRDGRMSVTHSRIFHLSLGSEKHTLAC-CWRKQHQ 169
           H P + +  C +W +SH +Y+  + +    + V H        G    T  C  W K H 
Sbjct: 114 HGPKATTSTCPTWTKSHHLYLSHMDQEPPTLLVPH--------GPRATTSTCPTWTKSHH 165

Query: 170 HY------NVPLLLRQHWCFAAPNALKAWNMPHYLCTHVPSEH*VFL 292
            Y        P LL  H   A  +    W   H+L  H P  H ++L
Sbjct: 166 LYLSHMDQKPPPLLVPHGPRATTSTCPTWTKSHHLVPHGPRSHHLYL 212


>tr|A8WG41|A8WG41_DANRE Hhat protein OS=Danio rerio GN=hhat PE=2
           SV=1
          Length = 494

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 18/50 (36%), Positives = 28/50 (56%)
 Frame = +1

Query: 136 YISVLLEEATSTLQCAPPPEAALVLCSTKCLESMEYAPLSLYSRAFRTLS 285
           ++ VL+E A + L  +PP   A+V C T  ++    A +S +S AF  LS
Sbjct: 398 WVGVLVENAFALLFSSPPLRHAIVYCLTPRMQRRGLALISAFSTAFLILS 447


>tr|Q1ECB8|Q1ECB8_DROME IP02907p OS=Drosophila melanogaster
           GN=mAcR-60C PE=2 SV=1
          Length = 580

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 17/42 (40%), Positives = 24/42 (57%)
 Frame = -1

Query: 209 STNAASGGGAHCNVDVASSSSTLMYASQSPSLNEIFENGSQT 84
           S+NAA+GGG       A+S+S  M    +PS+  I E+G  T
Sbjct: 358 SSNAANGGGGGPGAGAAASASLSMQGDCAPSIKMIHEDGPTT 399


>tr|B4QBX9|B4QBX9_DROSI GD24962 OS=Drosophila simulans GN=GD24962
           PE=4 SV=1
          Length = 788

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 16/42 (38%), Positives = 24/42 (57%)
 Frame = -1

Query: 209 STNAASGGGAHCNVDVASSSSTLMYASQSPSLNEIFENGSQT 84
           S+NAA+GGG       A+S++  M    +PS+  I E+G  T
Sbjct: 566 SSNAANGGGGGAGAGAAASAALSMQGDCAPSIKMIHEDGPTT 607


>tr|B4IHF2|B4IHF2_DROSE GM11841 OS=Drosophila sechellia GN=GM11841
           PE=4 SV=1
          Length = 788

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 16/42 (38%), Positives = 24/42 (57%)
 Frame = -1

Query: 209 STNAASGGGAHCNVDVASSSSTLMYASQSPSLNEIFENGSQT 84
           S+NAA+GGG       A+S++  M    +PS+  I E+G  T
Sbjct: 566 SSNAANGGGGGAGAGAAASAALSMQGDCAPSIKMIHEDGPTT 607


>tr|A7S0F4|A7S0F4_NEMVE Predicted protein (Fragment) OS=Nematostella
           vectensis GN=v1g71950 PE=4 SV=1
          Length = 163

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 17/43 (39%), Positives = 22/43 (51%)
 Frame = +1

Query: 136 YISVLLEEATSTLQCAPPPEAALVLCSTKCLESMEYAPLSLYS 264
           +I VL   +T T  C+PPP     +CS   L S   AP S Y+
Sbjct: 50  HIHVLPPPSTHTFMCSPPPSTHRFMCSPLPLHSHSCAPPSPYT 92


>tr|B4J8B8|B4J8B8_DROGR GH19985 OS=Drosophila grimshawi GN=GH19985
           PE=4 SV=1
          Length = 392

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 16/52 (30%), Positives = 27/52 (51%)
 Frame = -1

Query: 167 DVASSSSTLMYASQSPSLNEIFENGSQTCGHLDALKCKWDEIPKTYTSVSNY 12
           DV +S S  + A+   +L  +FE G++   H        D +PKTYT++  +
Sbjct: 48  DVEASCSLQLLATSDDNLINVFEPGNEMRRHTRPKPQADDNVPKTYTAIKEH 99


>tr|B6HGA1|B6HGA1_PENCH Pc20g11670 protein OS=Penicillium
           chrysogenum Wisconsin 54-1255 GN=Pc20g11670 PE=4 SV=1
          Length = 1294

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +2

Query: 107 FHLSLGSEKHTLACCWRKQHQHYNVPLLLRQHWCFAAPNALK 232
           F++ L S       CW +QH  Y  PL +RQ + F  P  L+
Sbjct: 410 FNVFLASVHSVEVACWIRQHTEYLRPLWIRQPYEFVVPKELQ 451