BP917533
Clone id YMU001_000102_A08
Library
Length 396
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000102_A08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TCTCGCAGCCAACTTTGGTTGGCCTATCTTCCAAATGGATGTCACAAGTGCTTGTCTAAA
TGGAGATTTGGATAAAGAAGTTTATGTGGAGCAACCTCCTGGGTTTCGTATACCAAGCAA
GGAGAATTAGGTCTAATAGTAGTGGAAAGCATTGTATGGATTGAAGCAAGCTGGACGATA
GTGGTACCTCACACTTAACCAGGTTCTTGTGAAGCTAGGGTTACGGCGTACATCATTAGA
TTCCAACTATTATGTCGTCTTTGTTGGCTCTTTGGTAGCGATGGTGATTGTCGATGTGGA
CAATCCCATTTTCACAGGCTCGTGGACCAACAGGATCAAGTCGATCATGAAAGCTATGGA
GACACGTTTCAAGATGACTGATCTTTGGCTTCTTCA
■■Homology search results ■■ -
sp_hit_id P10978
Definition sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum
Align length 129
Score (bit) 69.3
E-value 6.0e-12
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917533|Adiantum capillus-veneris mRNA, clone:
YMU001_000102_A08.
(396 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from tra... 69 6e-12
sp|P04146|COPIA_DROME Copia protein OS=Drosophila melanogaster G... 63 4e-10
sp|Q12088|YL11B_YEAST Transposon Ty1-LR1 Gag-Pol polyprotein OS=... 51 2e-06
sp|P0C2J0|YP13B_YEAST Transposon Ty1-PR2 Gag-Pol polyprotein OS=... 50 3e-06
sp|Q12414|YP11B_YEAST Transposon Ty1-PL Gag-Pol polyprotein OS=S... 50 3e-06
sp|Q12273|YO11B_YEAST Transposon Ty1-OL Gag-Pol polyprotein OS=S... 50 3e-06
sp|Q04670|YM14B_YEAST Transposon Ty1-MR2 Gag-Pol polyprotein OS=... 50 3e-06
sp|Q03434|YM12B_YEAST Transposon Ty1-ML2 Gag-Pol polyprotein OS=... 50 3e-06
sp|Q04711|YM11B_YEAST Transposon Ty1-ML1 Gag-Pol polyprotein OS=... 50 3e-06
sp|P0C2I5|YL12B_YEAST Transposon Ty1-LR2 Gag-Pol polyprotein OS=... 50 3e-06
sp|O13535|YH11B_YEAST Transposon Ty1-H Gag-Pol polyprotein OS=Sa... 50 3e-06
sp|Q12269|YG12B_YEAST Transposon Ty1-GR2 Gag-Pol polyprotein OS=... 50 3e-06
sp|Q03619|YE12B_YEAST Transposon Ty1-ER2 Gag-Pol polyprotein OS=... 50 3e-06
sp|Q03612|YE11B_YEAST Transposon Ty1-ER1 Gag-Pol polyprotein OS=... 50 3e-06
sp|P0C2I2|YD14B_YEAST Transposon Ty1-DR5 Gag-Pol polyprotein OS=... 50 3e-06
sp|Q99231|YD12B_YEAST Transposon Ty1-DR3 Gag-Pol polyprotein OS=... 50 3e-06
sp|Q03855|YD11B_YEAST Transposon Ty1-DR1 Gag-Pol polyprotein OS=... 50 3e-06
sp|P25600|YCH4_YEAST Putative transposon Ty5-1 protein YCL074W O... 50 3e-06
sp|O13527|YA11B_YEAST Transposon Ty1-A Gag-Pol polyprotein OS=Sa... 50 3e-06
sp|Q92393|YO12B_YEAST Transposon Ty1-OR Gag-Pol polyprotein OS=S... 50 5e-06
sp|Q12316|YG13B_YEAST Transposon Ty1-GR3 Gag-Pol polyprotein OS=... 50 5e-06
sp|Q12193|YB12B_YEAST Transposon Ty1-BR Gag-Pol polyprotein OS=S... 50 5e-06
sp|Q12490|YB11B_YEAST Transposon Ty1-BL Gag-Pol polyprotein OS=S... 50 5e-06
sp|Q04214|YM13B_YEAST Transposon Ty1-MR1 Gag-Pol polyprotein OS=... 49 6e-06
sp|Q12112|YN11B_YEAST Transposon Ty1-NL1 Gag-Pol polyprotein OS=... 49 1e-05
sp|P0C2I7|YL14B_YEAST Transposon Ty1-LR4 Gag-Pol polyprotein OS=... 49 1e-05
sp|P47024|YJ41B_YEAST Transposon Ty4-J Gag-Pol polyprotein OS=Sa... 49 1e-05
sp|P47100|YJ12B_YEAST Transposon Ty1-JR2 Gag-Pol polyprotein OS=... 49 1e-05
sp|P0C2J7|YH41B_YEAST Transposon Ty4-H Gag-Pol polyprotein OS=Sa... 49 1e-05
sp|P0C2I3|YD15B_YEAST Transposon Ty1-DR6 Gag-Pol polyprotein OS=... 49 1e-05

>sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from
transposon TNT 1-94 OS=Nicotiana tabacum PE=2 SV=1
Length = 1328

Score = 69.3 bits (168), Expect = 6e-12
Identities = 43/129 (33%), Positives = 70/129 (54%), Gaps = 1/129 (0%)
Frame = +2

Query: 2 LAANFGWPIFQMDVTSACLNGDLDKEVYVEQPPGFRIPSKEN*V***WKALYGLKQAGR* 181
LAA+ + Q+DV +A L+GDL++E+Y+EQP GF + K++ V K+LYGLKQA R
Sbjct: 910 LAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQ 969

Query: 182 WYLTLNQVLVKLGLRRTSLD-SNYYVVFVGSLVAMVIVDVDNPIFTGSWTNRIKSIMKAM 358
WY+ + + +T D Y+ F + ++++ VD+ + G I + +
Sbjct: 970 WYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDL 1029

Query: 359 ETRFKMTDL 385
F M DL
Sbjct: 1030 SKSFDMKDL 1038


>sp|P04146|COPIA_DROME Copia protein OS=Drosophila melanogaster GN=GIP
PE=1 SV=3
Length = 1409

Score = 63.2 bits (152), Expect = 4e-10
Identities = 42/134 (31%), Positives = 67/134 (50%), Gaps = 6/134 (4%)
Frame = +2

Query: 2 LAANFGWPIFQMDVTSACLNGDLDKEVYVEQPPGFRIPS----KEN*V***WKALYGLKQ 169
L + + QMDV +A LNG L +E+Y+ P G S K N KA+YGLKQ
Sbjct: 990 LVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQGISCNSDNVCKLN------KAIYGLKQ 1043

Query: 170 AGR*WYLTLNQVLVKLGLRRTSLDSNYYVVFVGSL--VAMVIVDVDNPIFTGSWTNRIKS 343
A R W+ Q L + +S+D Y++ G++ V++ VD+ + R+ +
Sbjct: 1044 AARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENIYVLLYVDDVVIATGDMTRMNN 1103

Query: 344 IMKAMETRFKMTDL 385
+ + +F+MTDL
Sbjct: 1104 FKRYLMEKFRMTDL 1117


>sp|Q12088|YL11B_YEAST Transposon Ty1-LR1 Gag-Pol polyprotein
OS=Saccharomyces cerevisiae GN=TY1B-LR1 PE=1 SV=1
Length = 1755

Score = 51.2 bits (121), Expect = 2e-06
Identities = 38/124 (30%), Positives = 64/124 (51%), Gaps = 1/124 (0%)
Frame = +2

Query: 2 LAANFGWPIFQMDVTSACLNGDLDKEVYVEQPPGFRIPSKEN*V***WKALYGLKQAGR* 181
LA++ + I Q+D++SA L D+ +E+Y+ PP + K + K+LYGLKQ+G
Sbjct: 1334 LASDNNYYITQLDISSAYLYADIKEELYIRPPPHLGMNDKLIRL---KKSLYGLKQSGAN 1390

Query: 182 WYLTLNQVLVK-LGLRRTSLDSNYYVVFVGSLVAMVIVDVDNPIFTGSWTNRIKSIMKAM 358
WY T+ L+K G+ + VF S V + + VD+ I N K I+ +
Sbjct: 1391 WYETIKSYLIKQCGMEEV---RGWSCVFKNSQVTICLF-VDDMILFSKDLNANKKIITTL 1446

Query: 359 ETRF 370
+ ++
Sbjct: 1447 KKQY 1450


>sp|P0C2J0|YP13B_YEAST Transposon Ty1-PR2 Gag-Pol polyprotein
OS=Saccharomyces cerevisiae GN=TY1B-PR2 PE=1 SV=1
Length = 1756

Score = 50.4 bits (119), Expect = 3e-06
Identities = 38/124 (30%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
Frame = +2

Query: 2 LAANFGWPIFQMDVTSACLNGDLDKEVYVEQPPGFRIPSKEN*V***WKALYGLKQAGR* 181
LA + + I Q+D++SA L D+ +E+Y+ PP + K + K+LYGLKQ+G
Sbjct: 1335 LALDNNYYITQLDISSAYLYADIKEELYIRPPPHLGMNDKLIRL---KKSLYGLKQSGAN 1391

Query: 182 WYLTLNQVLVK-LGLRRTSLDSNYYVVFVGSLVAMVIVDVDNPIFTGSWTNRIKSIMKAM 358
WY T+ L+K G+ + VF S V + + VD+ I N K I+ +
Sbjct: 1392 WYETIKSYLIKQCGMEEV---RGWSCVFKNSQVTICLF-VDDMILFSKDLNANKKIITTL 1447

Query: 359 ETRF 370
+ ++
Sbjct: 1448 KKQY 1451


>sp|Q12414|YP11B_YEAST Transposon Ty1-PL Gag-Pol polyprotein
OS=Saccharomyces cerevisiae GN=TY1B-PL PE=2 SV=1
Length = 1755

Score = 50.4 bits (119), Expect = 3e-06
Identities = 38/124 (30%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
Frame = +2

Query: 2 LAANFGWPIFQMDVTSACLNGDLDKEVYVEQPPGFRIPSKEN*V***WKALYGLKQAGR* 181
LA + + I Q+D++SA L D+ +E+Y+ PP + K + K+LYGLKQ+G
Sbjct: 1334 LALDNNYYITQLDISSAYLYADIKEELYIRPPPHLGMNDKLIRL---KKSLYGLKQSGAN 1390

Query: 182 WYLTLNQVLVK-LGLRRTSLDSNYYVVFVGSLVAMVIVDVDNPIFTGSWTNRIKSIMKAM 358
WY T+ L+K G+ + VF S V + + VD+ I N K I+ +
Sbjct: 1391 WYETIKSYLIKQCGMEEV---RGWSCVFKNSQVTICLF-VDDMILFSKDLNANKKIITTL 1446

Query: 359 ETRF 370
+ ++
Sbjct: 1447 KKQY 1450


>sp|Q12273|YO11B_YEAST Transposon Ty1-OL Gag-Pol polyprotein
OS=Saccharomyces cerevisiae GN=TY1B-OL PE=3 SV=1
Length = 1755

Score = 50.4 bits (119), Expect = 3e-06
Identities = 38/124 (30%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
Frame = +2

Query: 2 LAANFGWPIFQMDVTSACLNGDLDKEVYVEQPPGFRIPSKEN*V***WKALYGLKQAGR* 181
LA + + I Q+D++SA L D+ +E+Y+ PP + K + K+LYGLKQ+G
Sbjct: 1334 LALDNNYYITQLDISSAYLYADIKEELYIRPPPHLGMNDKLIRL---KKSLYGLKQSGAN 1390

Query: 182 WYLTLNQVLVK-LGLRRTSLDSNYYVVFVGSLVAMVIVDVDNPIFTGSWTNRIKSIMKAM 358
WY T+ L+K G+ + VF S V + + VD+ I N K I+ +
Sbjct: 1391 WYETIKSYLIKQCGMEEV---RGWSCVFKNSQVTICLF-VDDMILFSKDLNANKKIITTL 1446

Query: 359 ETRF 370
+ ++
Sbjct: 1447 KKQY 1450


>sp|Q04670|YM14B_YEAST Transposon Ty1-MR2 Gag-Pol polyprotein
OS=Saccharomyces cerevisiae GN=TY1B-MR2 PE=1 SV=2
Length = 1755

Score = 50.4 bits (119), Expect = 3e-06
Identities = 38/124 (30%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
Frame = +2

Query: 2 LAANFGWPIFQMDVTSACLNGDLDKEVYVEQPPGFRIPSKEN*V***WKALYGLKQAGR* 181
LA + + I Q+D++SA L D+ +E+Y+ PP + K + K+LYGLKQ+G
Sbjct: 1334 LALDNNYYITQLDISSAYLYADIKEELYIRPPPHLGMNDKLIRL---KKSLYGLKQSGAN 1390

Query: 182 WYLTLNQVLVK-LGLRRTSLDSNYYVVFVGSLVAMVIVDVDNPIFTGSWTNRIKSIMKAM 358
WY T+ L+K G+ + VF S V + + VD+ I N K I+ +
Sbjct: 1391 WYETIKSYLIKQCGMEEV---RGWSCVFKNSQVTICLF-VDDMILFSKDLNANKKIITTL 1446

Query: 359 ETRF 370
+ ++
Sbjct: 1447 KKQY 1450


>sp|Q03434|YM12B_YEAST Transposon Ty1-ML2 Gag-Pol polyprotein
OS=Saccharomyces cerevisiae GN=TY1B-ML2 PE=2 SV=2
Length = 1755

Score = 50.4 bits (119), Expect = 3e-06
Identities = 38/124 (30%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
Frame = +2

Query: 2 LAANFGWPIFQMDVTSACLNGDLDKEVYVEQPPGFRIPSKEN*V***WKALYGLKQAGR* 181
LA + + I Q+D++SA L D+ +E+Y+ PP + K + K+LYGLKQ+G
Sbjct: 1334 LALDNNYYITQLDISSAYLYADIKEELYIRPPPHLGMNDKLIRL---KKSLYGLKQSGAN 1390

Query: 182 WYLTLNQVLVK-LGLRRTSLDSNYYVVFVGSLVAMVIVDVDNPIFTGSWTNRIKSIMKAM 358
WY T+ L+K G+ + VF S V + + VD+ I N K I+ +
Sbjct: 1391 WYETIKSYLIKQCGMEEV---RGWSCVFKNSQVTICLF-VDDMILFSKDLNANKKIITTL 1446

Query: 359 ETRF 370
+ ++
Sbjct: 1447 KKQY 1450


>sp|Q04711|YM11B_YEAST Transposon Ty1-ML1 Gag-Pol polyprotein
OS=Saccharomyces cerevisiae GN=TY1B-ML1 PE=2 SV=2
Length = 1755

Score = 50.4 bits (119), Expect = 3e-06
Identities = 38/124 (30%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
Frame = +2

Query: 2 LAANFGWPIFQMDVTSACLNGDLDKEVYVEQPPGFRIPSKEN*V***WKALYGLKQAGR* 181
LA + + I Q+D++SA L D+ +E+Y+ PP + K + K+LYGLKQ+G
Sbjct: 1334 LALDNNYYITQLDISSAYLYADIKEELYIRPPPHLGMNDKLIRL---KKSLYGLKQSGAN 1390

Query: 182 WYLTLNQVLVK-LGLRRTSLDSNYYVVFVGSLVAMVIVDVDNPIFTGSWTNRIKSIMKAM 358
WY T+ L+K G+ + VF S V + + VD+ I N K I+ +
Sbjct: 1391 WYETIKSYLIKQCGMEEV---RGWSCVFKNSQVTICLF-VDDMILFSKDLNANKKIITTL 1446

Query: 359 ETRF 370
+ ++
Sbjct: 1447 KKQY 1450


>sp|P0C2I5|YL12B_YEAST Transposon Ty1-LR2 Gag-Pol polyprotein
OS=Saccharomyces cerevisiae GN=TY1B-LR2 PE=3 SV=1
Length = 1755

Score = 50.4 bits (119), Expect = 3e-06
Identities = 38/124 (30%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
Frame = +2

Query: 2 LAANFGWPIFQMDVTSACLNGDLDKEVYVEQPPGFRIPSKEN*V***WKALYGLKQAGR* 181
LA + + I Q+D++SA L D+ +E+Y+ PP + K + K+LYGLKQ+G
Sbjct: 1334 LALDNNYYITQLDISSAYLYADIKEELYIRPPPHLGMNDKLIRL---KKSLYGLKQSGAN 1390

Query: 182 WYLTLNQVLVK-LGLRRTSLDSNYYVVFVGSLVAMVIVDVDNPIFTGSWTNRIKSIMKAM 358
WY T+ L+K G+ + VF S V + + VD+ I N K I+ +
Sbjct: 1391 WYETIKSYLIKQCGMEEV---RGWSCVFKNSQVTICLF-VDDMILFSKDLNANKKIITTL 1446

Query: 359 ETRF 370
+ ++
Sbjct: 1447 KKQY 1450


tr_hit_id Q9LH44
Definition tr|Q9LH44|Q9LH44_ARATH Copia-like retrotransposable element OS=Arabidopsis thaliana
Align length 128
Score (bit) 106.0
E-value 5.0e-22
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917533|Adiantum capillus-veneris mRNA, clone:
YMU001_000102_A08.
(396 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q9LH44|Q9LH44_ARATH Copia-like retrotransposable element OS=A... 106 5e-22
tr|Q9ZQE9|Q9ZQE9_ARATH Putative retroelement pol polyprotein OS=... 106 7e-22
tr|Q8L4X0|Q8L4X0_ORYSJ Os10g0130700 protein OS=Oryza sativa subs... 101 2e-20
tr|Q01KU7|Q01KU7_ORYSA OSIGBa0115A19.5 protein OS=Oryza sativa G... 101 2e-20
tr|Q60DG5|Q60DG5_ORYSJ Putative polyprotein OS=Oryza sativa subs... 101 2e-20
tr|Q9AUM6|Q9AUM6_ORYSA Putative gag-pol polyprotein OS=Oryza sat... 100 6e-20
tr|Q10F54|Q10F54_ORYSJ Retrotransposon protein, putative, Ty1-co... 100 6e-20
tr|A5B0R8|A5B0R8_VITVI Putative uncharacterized protein OS=Vitis... 100 6e-20
tr|Q0D5X2|Q0D5X2_ORYSJ Os07g0528100 protein (Fragment) OS=Oryza ... 99 8e-20
tr|B7EQQ7|B7EQQ7_ORYSJ cDNA clone:J023111N02, full insert sequen... 99 8e-20
tr|Q7XEA3|Q7XEA3_ORYSJ Retrotransposon protein, putative, Ty1-co... 99 1e-19
tr|Q7FAB9|Q7FAB9_ORYSJ OSJNBa0033H08.2 protein OS=Oryza sativa s... 99 1e-19
tr|Q2R072|Q2R072_ORYSJ Retrotransposon protein, putative, unclas... 99 1e-19
tr|Q2QZL2|Q2QZL2_ORYSJ Retrotransposon protein, putative, unclas... 99 1e-19
tr|Q0JE84|Q0JE84_ORYSJ Os04g0311300 protein OS=Oryza sativa subs... 99 1e-19
tr|Q0IRB1|Q0IRB1_ORYSJ Os11g0656500 protein (Fragment) OS=Oryza ... 99 1e-19
tr|Q0IR42|Q0IR42_ORYSJ Os11g0682500 protein (Fragment) OS=Oryza ... 99 1e-19
tr|Q01M13|Q01M13_ORYSA OSIGBa0148D14.8 protein (OSIGBa0130O15.1 ... 99 1e-19
tr|B8BH06|B8BH06_ORYSI Putative uncharacterized protein OS=Oryza... 99 1e-19
tr|Q2R0F6|Q2R0F6_ORYSJ Retrotransposon protein, putative, unclas... 98 2e-19
tr|Q7Y141|Q7Y141_ORYSJ Putative polyprotein (Retrotransposon pro... 98 2e-19
tr|Q2QXM6|Q2QXM6_ORYSJ Retrotransposon protein, putative, unclas... 98 2e-19
tr|Q2QLK1|Q2QLK1_ORYSJ Retrotransposon protein, putative, unclas... 98 2e-19
tr|A5AUK6|A5AUK6_VITVI Putative uncharacterized protein OS=Vitis... 97 3e-19
tr|Q25AG1|Q25AG1_ORYSA H0512B01.3 protein OS=Oryza sativa GN=H05... 97 4e-19
tr|Q8W3A4|Q8W3A4_ORYSA Putative gag-pol polyprotein OS=Oryza sat... 96 7e-19
tr|Q75IL9|Q75IL9_ORYSJ Pupative polyprotein OS=Oryza sativa subs... 96 7e-19
tr|Q5TKD7|Q5TKD7_ORYSJ Putative uncharacterized protein OSJNBa00... 96 7e-19
tr|Q2QWX3|Q2QWX3_ORYSJ Retrotransposon protein, putative, unclas... 96 7e-19
tr|Q10KL1|Q10KL1_ORYSJ Retrotransposon protein, putative, unclas... 96 7e-19

>tr|Q9LH44|Q9LH44_ARATH Copia-like retrotransposable element
OS=Arabidopsis thaliana PE=4 SV=1
Length = 1499

Score = 106 bits (265), Expect = 5e-22
Identities = 59/128 (46%), Positives = 79/128 (61%)
Frame = +2

Query: 2 LAANFGWPIFQMDVTSACLNGDLDKEVYVEQPPGFRIPSKEN*V***WKALYGLKQAGR* 181
+AA GW +FQMDV SA LNGDL++EVY+EQPPGF +E V KALYGLKQA R
Sbjct: 937 IAAQQGWKLFQMDVKSAFLNGDLEEEVYIEQPPGFIEEKEEGKVLKLHKALYGLKQAPRA 996

Query: 182 WYLTLNQVLVKLGLRRTSLDSNYYVVFVGSLVAMVIVDVDNPIFTGSWTNRIKSIMKAME 361
WY ++ +K G R+ D+ +YV + +V + VD+ I TGS I+ + M+
Sbjct: 997 WYGRIDGYFIKNGFERSINDAAFYVKKTSKEILVVSLYVDDIIVTGSNVKEIERFKEEMK 1056

Query: 362 TRFKMTDL 385
F+MTDL
Sbjct: 1057 NEFEMTDL 1064


>tr|Q9ZQE9|Q9ZQE9_ARATH Putative retroelement pol polyprotein
OS=Arabidopsis thaliana GN=At2g15650 PE=2 SV=1
Length = 1347

Score = 106 bits (264), Expect = 7e-22
Identities = 61/130 (46%), Positives = 81/130 (62%)
Frame = +2

Query: 5 AANFGWPIFQMDVTSACLNGDLDKEVYVEQPPGFRIPSKEN*V***WKALYGLKQAGR*W 184
AA W ++QMDV SA LNG+L++EVYV QPPGF I KE V +KALYGLKQA R W
Sbjct: 934 AAQMKWRLYQMDVKSAFLNGELEEEVYVTQPPGFVIEGKEEKVLRLYKALYGLKQAPRAW 993

Query: 185 YLTLNQVLVKLGLRRTSLDSNYYVVFVGSLVAMVIVDVDNPIFTGSWTNRIKSIMKAMET 364
Y ++ ++ G R+ D+ Y G V +V + VD+ I TG+ T+ I + K M+
Sbjct: 994 YERIDSYFIQNGFARSMNDAALYSKKKGEDVLIVSLYVDDLIITGNNTHLINTFKKNMKD 1053

Query: 365 RFKMTDLWLL 394
F+MTDL LL
Sbjct: 1054 EFEMTDLGLL 1063


>tr|Q8L4X0|Q8L4X0_ORYSJ Os10g0130700 protein OS=Oryza sativa subsp.
japonica GN=OSJNBb0072F04.17 PE=4 SV=1
Length = 1426

Score = 101 bits (252), Expect = 2e-20
Identities = 61/131 (46%), Positives = 79/131 (60%)
Frame = +2

Query: 2 LAANFGWPIFQMDVTSACLNGDLDKEVYVEQPPGFRIPSKEN*V***WKALYGLKQAGR* 181
+AAN GW I MDV SA LNGDL++EVYV QPPGF KE V KALYGLKQA R
Sbjct: 1011 VAANKGWEIHHMDVKSAFLNGDLEEEVYVVQPPGFIEKGKEGQVLRLKKALYGLKQAPRA 1070

Query: 182 WYLTLNQVLVKLGLRRTSLDSNYYVVFVGSLVAMVIVDVDNPIFTGSWTNRIKSIMKAME 361
W L+ L+ L ++ +S YV GS +V V VD+ I +G+ + I + M+
Sbjct: 1071 WNAKLHNTLISLNFIKSETESAVYVRGTGSSRLIVGVYVDDLIISGAQASEIDFFKEEMK 1130

Query: 362 TRFKMTDLWLL 394
+F+M+DL LL
Sbjct: 1131 KKFRMSDLGLL 1141


>tr|Q01KU7|Q01KU7_ORYSA OSIGBa0115A19.5 protein OS=Oryza sativa
GN=OSIGBa0115A19.5 PE=4 SV=1
Length = 1426

Score = 101 bits (252), Expect = 2e-20
Identities = 61/131 (46%), Positives = 79/131 (60%)
Frame = +2

Query: 2 LAANFGWPIFQMDVTSACLNGDLDKEVYVEQPPGFRIPSKEN*V***WKALYGLKQAGR* 181
+AAN GW I MDV SA LNGDL++EVYV QPPGF KE V KALYGLKQA R
Sbjct: 1011 VAANKGWEIHHMDVKSAFLNGDLEEEVYVVQPPGFIEKGKEGQVLRLKKALYGLKQAPRA 1070

Query: 182 WYLTLNQVLVKLGLRRTSLDSNYYVVFVGSLVAMVIVDVDNPIFTGSWTNRIKSIMKAME 361
W L+ L+ L ++ +S YV GS +V V VD+ I +G+ + I + M+
Sbjct: 1071 WNAKLHNTLISLNFIKSETESAVYVRGTGSSRLIVGVYVDDLIISGAQASEIDFFKEEMK 1130

Query: 362 TRFKMTDLWLL 394
+F+M+DL LL
Sbjct: 1131 KKFRMSDLGLL 1141


>tr|Q60DG5|Q60DG5_ORYSJ Putative polyprotein OS=Oryza sativa subsp.
japonica GN=B1110B01.4 PE=4 SV=1
Length = 1094

Score = 101 bits (251), Expect = 2e-20
Identities = 60/131 (45%), Positives = 78/131 (59%)
Frame = +2

Query: 2 LAANFGWPIFQMDVTSACLNGDLDKEVYVEQPPGFRIPSKEN*V***WKALYGLKQAGR* 181
LAA+ GW I MDV SA LNG+L+++VYV QPPGF + KEN V KALYGLKQA R
Sbjct: 683 LAAHEGWQIHHMDVKSAFLNGELEEDVYVVQPPGFVVEHKENKVLKLKKALYGLKQAPRA 742

Query: 182 WYLTLNQVLVKLGLRRTSLDSNYYVVFVGSLVAMVIVDVDNPIFTGSWTNRIKSIMKAME 361
WY L+ L L R++ ++ Y G+ +V V VD+ I TG+ I + M
Sbjct: 743 WYAKLDSTLANLDFVRSATENAVYTRGEGNARLVVGVYVDDLIITGALGTEIAKFKEQMR 802

Query: 362 TRFKMTDLWLL 394
+ F M+DL LL
Sbjct: 803 SMFSMSDLGLL 813


>tr|Q9AUM6|Q9AUM6_ORYSA Putative gag-pol polyprotein OS=Oryza sativa
GN=OSJNBa0067E01.5 PE=4 SV=1
Length = 1831

Score = 99.8 bits (247), Expect = 6e-20
Identities = 59/131 (45%), Positives = 79/131 (60%)
Frame = +2

Query: 2 LAANFGWPIFQMDVTSACLNGDLDKEVYVEQPPGFRIPSKEN*V***WKALYGLKQAGR* 181
LAA GW + MDV SA LNGDL KEVY QPPGF IPSKEN V KALYGL QA R
Sbjct: 1325 LAAQEGWRVHHMDVKSAFLNGDLKKEVYAHQPPGFVIPSKENKVLRLRKALYGLWQAPRA 1384

Query: 182 WYLTLNQVLVKLGLRRTSLDSNYYVVFVGSLVAMVIVDVDNPIFTGSWTNRIKSIMKAME 361
W L+ L ++G +++S ++ Y +V V VD+ + TG+ +++ + M+
Sbjct: 1385 WNAKLDSTLKQMGFQQSSHEAAVYRRGKDGNALLVGVYVDDLVITGTKEAEVEAFKEEMK 1444

Query: 362 TRFKMTDLWLL 394
F+M+DL LL
Sbjct: 1445 ATFQMSDLGLL 1455


>tr|Q10F54|Q10F54_ORYSJ Retrotransposon protein, putative, Ty1-copia
subclass OS=Oryza sativa subsp. japonica
GN=LOC_Os03g47702 PE=4 SV=1
Length = 2311

Score = 99.8 bits (247), Expect = 6e-20
Identities = 59/131 (45%), Positives = 79/131 (60%)
Frame = +2

Query: 2 LAANFGWPIFQMDVTSACLNGDLDKEVYVEQPPGFRIPSKEN*V***WKALYGLKQAGR* 181
LAA GW + MDV SA LNGDL KEVY QPPGF IPSKEN V KALYGL QA R
Sbjct: 1805 LAAQEGWRVHHMDVKSAFLNGDLKKEVYAHQPPGFVIPSKENKVLRLRKALYGLWQAPRA 1864

Query: 182 WYLTLNQVLVKLGLRRTSLDSNYYVVFVGSLVAMVIVDVDNPIFTGSWTNRIKSIMKAME 361
W L+ L ++G +++S ++ Y +V V VD+ + TG+ +++ + M+
Sbjct: 1865 WNAKLDSTLKQMGFQQSSHEAAVYRRGKDGNALLVGVYVDDLVITGTKEAEVEAFKEEMK 1924

Query: 362 TRFKMTDLWLL 394
F+M+DL LL
Sbjct: 1925 ATFQMSDLGLL 1935


>tr|A5B0R8|A5B0R8_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_013540 PE=4 SV=1
Length = 894

Score = 99.8 bits (247), Expect = 6e-20
Identities = 59/128 (46%), Positives = 78/128 (60%)
Frame = +2

Query: 2 LAANFGWPIFQMDVTSACLNGDLDKEVYVEQPPGFRIPSKEN*V***WKALYGLKQAGR* 181
LAA W I Q+DV SA LNG +DKE+YVEQP G PSKE+ V KALYGLKQA R
Sbjct: 466 LAAQNSWHIHQLDVKSAFLNGFVDKEIYVEQPDGVVAPSKEDYVYLLRKALYGLKQAPRA 525

Query: 182 WYLTLNQVLVKLGLRRTSLDSNYYVVFVGSLVAMVIVDVDNPIFTGSWTNRIKSIMKAME 361
WY T+++ L KLG R+ ++ YV + ++ + VD+ + TG+ I+S M
Sbjct: 526 WYETMDKHLTKLGFVRSQSEATLYVKTNDVQLLIISLYVDDMLVTGNQPKLIQSFKDEMN 585

Query: 362 TRFKMTDL 385
F+MTDL
Sbjct: 586 KVFEMTDL 593


>tr|Q0D5X2|Q0D5X2_ORYSJ Os07g0528100 protein (Fragment) OS=Oryza
sativa subsp. japonica GN=Os07g0528100 PE=4 SV=1
Length = 1187

Score = 99.4 bits (246), Expect = 8e-20
Identities = 59/131 (45%), Positives = 78/131 (59%)
Frame = +2

Query: 2 LAANFGWPIFQMDVTSACLNGDLDKEVYVEQPPGFRIPSKEN*V***WKALYGLKQAGR* 181
LAA+ GW I MDV SA LNG+L+++VYV QPPGF + KEN V KALYGLKQA R
Sbjct: 776 LAAHEGWQIHHMDVKSAFLNGELEEDVYVVQPPGFVVEHKENKVLKLKKALYGLKQAPRA 835

Query: 182 WYLTLNQVLVKLGLRRTSLDSNYYVVFVGSLVAMVIVDVDNPIFTGSWTNRIKSIMKAME 361
WY L+ L L R++ ++ Y G+ +V V VD+ I TG+ I + M
Sbjct: 836 WYAKLDSTLANLDFVRSATENAVYTRGEGNARLVVGVYVDDLIITGALGTEIAKFKEQMR 895

Query: 362 TRFKMTDLWLL 394
+ F M++L LL
Sbjct: 896 SMFSMSNLGLL 906


>tr|B7EQQ7|B7EQQ7_ORYSJ cDNA clone:J023111N02, full insert sequence
OS=Oryza sativa subsp. japonica PE=2 SV=1
Length = 1094

Score = 99.4 bits (246), Expect = 8e-20
Identities = 59/131 (45%), Positives = 78/131 (59%)
Frame = +2

Query: 2 LAANFGWPIFQMDVTSACLNGDLDKEVYVEQPPGFRIPSKEN*V***WKALYGLKQAGR* 181
LAA+ GW I MDV SA LNG+L+++VYV QPPGF + KEN V KALYGLKQA R
Sbjct: 683 LAAHEGWQIHHMDVKSAFLNGELEEDVYVVQPPGFVVEHKENKVLKLKKALYGLKQAPRA 742

Query: 182 WYLTLNQVLVKLGLRRTSLDSNYYVVFVGSLVAMVIVDVDNPIFTGSWTNRIKSIMKAME 361
WY L+ L L R++ ++ Y G+ +V V VD+ I TG+ I + M
Sbjct: 743 WYAKLDSTLANLDFVRSATENAVYTRGEGNARLVVGVYVDDLIITGALGTEIAKFKEQMR 802

Query: 362 TRFKMTDLWLL 394
+ F M++L LL
Sbjct: 803 SMFSMSNLGLL 813