BP917534
Clone id YMU001_000102_A10
Library
Length 373
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000102_A10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
ATATCAATGGGACTCTCAAGTTTTCATCATCTTTGTCCGCTCTGAATGGCAGAGAAACCT
CGTCAGCTGTCGTCCCTGCATTATAGACTATCACAAAACTTGGTTCTACAAGAAGAGAGG
CTGTATTTAGTAGCCAGATGCAAAATCTCATCCTCCAGCTTCTTCCTCTCCTCCAGGTCC
GAGCAGGAGAGCACCTTATCTTCAAGTTCTCTCACCCTCTCCTTCGCTGCAAGTGTGTGA
ATGACTCCTGCCAGCGTGATCTGCTCACCTGTCAACCTAACTACATGATGCATGTGTTGA
TCTTTCTCAAGATGGTGATTGCTACAGGCAGTTATGCGTATCTCACAATCGAAGTCCACT
TCTTGACCTTCTT
■■Homology search results ■■ -
sp_hit_id Q66JQ7
Definition sp|Q66JQ7|CASC5_MOUSE Protein CASC5 OS=Mus musculus
Align length 69
Score (bit) 33.5
E-value 0.34
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917534|Adiantum capillus-veneris mRNA, clone:
YMU001_000102_A10.
(373 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q66JQ7|CASC5_MOUSE Protein CASC5 OS=Mus musculus GN=Casc5 PE=... 33 0.34
sp|Q8TD10|MIPO1_HUMAN Mirror-image polydactyly gene 1 protein OS... 32 0.75
sp|Q0IJ05|OSBL9_XENTR Oxysterol-binding protein-related protein ... 31 1.7
sp|P55148|GVPK_ANAFL Protein gvpK OS=Anabaena flos-aquae GN=gvpK... 31 2.2
sp|B0TXA0|ACCA_FRAP2 Acetyl-coenzyme A carboxylase carboxyl tran... 30 4.9
sp|P51834|SMC_BACSU Chromosome partition protein smc OS=Bacillus... 29 6.4
sp|Q9UKK3|PARP4_HUMAN Poly [ADP-ribose] polymerase 4 OS=Homo sap... 29 6.4
sp|P26822|CH10_CLOPE 10 kDa chaperonin OS=Clostridium perfringen... 29 6.4
sp|Q0TN26|CH10_CLOP1 10 kDa chaperonin OS=Clostridium perfringen... 29 6.4
sp|Q95UN8|M3KSL_DROME Mitogen-activated protein kinase kinase ki... 29 8.3
sp|Q0SQQ6|CH10_CLOPS 10 kDa chaperonin OS=Clostridium perfringen... 29 8.3
sp|P27951|BAG_STRAG IgA FC receptor OS=Streptococcus agalactiae ... 29 8.3
sp|A4IXL3|ACCA_FRATW Acetyl-coenzyme A carboxylase carboxyl tran... 29 8.3
sp|Q0BNM6|ACCA_FRATO Acetyl-coenzyme A carboxylase carboxyl tran... 29 8.3
sp|A0Q808|ACCA_FRATN Acetyl-coenzyme A carboxylase carboxyl tran... 29 8.3
sp|Q2A5B4|ACCA_FRATH Acetyl-coenzyme A carboxylase carboxyl tran... 29 8.3
sp|A7N9Y7|ACCA_FRATF Acetyl-coenzyme A carboxylase carboxyl tran... 29 8.3

>sp|Q66JQ7|CASC5_MOUSE Protein CASC5 OS=Mus musculus GN=Casc5 PE=2
SV=2
Length = 1612

Score = 33.5 bits (75), Expect = 0.34
Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
Frame = -3

Query: 371 EGQEVDFDCEIRITACSNHHLEKDQHMHHVVRLTGEQITL---AGVIHTLAAKERVRELE 201
EG E D D T NH D+H H+V L G T+ G + + LE
Sbjct: 730 EGNEGDMDITKSCTVKINHRSLLDKHDSHLVSLAGTSKTILHARGQVEMEINRSHTTPLE 789

Query: 200 DKVLSCSDL 174
K++S SD+
Sbjct: 790 CKIISPSDI 798


>sp|Q8TD10|MIPO1_HUMAN Mirror-image polydactyly gene 1 protein
OS=Homo sapiens GN=MIPOL1 PE=2 SV=1
Length = 442

Score = 32.3 bits (72), Expect = 0.75
Identities = 31/95 (32%), Positives = 42/95 (44%), Gaps = 17/95 (17%)
Frame = -3

Query: 350 DCEIRITACSNHHL--EKD----------QHMHHVVRLTGEQITLAGVIHTLAAKERVRE 207
+C++RITA L E+D Q +HHV Q + + H A + R
Sbjct: 253 ECKMRITAEEMSALIEERDAALSKCKRLEQELHHVKEQN--QTSANNMRHLTAENNQERA 310

Query: 206 LEDKVLSCSDLEER-----KKLEDEILHLATKYSL 117
L+ K+LS E KKLE+EI L YSL
Sbjct: 311 LKAKLLSMQQARETAVQQYKKLEEEIQTLRVYYSL 345


>sp|Q0IJ05|OSBL9_XENTR Oxysterol-binding protein-related protein 9
OS=Xenopus tropicalis GN=osbpl9 PE=2 SV=1
Length = 739

Score = 31.2 bits (69), Expect = 1.7
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = -3

Query: 221 ERVRELEDKVLSCSDLEERKKLED 150
++++ +DK+ SC D E+RKK+ED
Sbjct: 136 DQIKLFDDKIQSCKDDEQRKKIED 159


>sp|P55148|GVPK_ANAFL Protein gvpK OS=Anabaena flos-aquae GN=gvpK
PE=4 SV=1
Length = 155

Score = 30.8 bits (68), Expect = 2.2
Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Frame = -3

Query: 260 ITLAGVIHTLAAKERVRELEDKVLSCSDLEER----KKLEDEILHLATKYSL 117
+T+ ++ L + +R +E+ +LS DLE +KLE++ILHL + +
Sbjct: 30 LTVLELVRQLMEAQVIRRMEEDLLSEPDLERAADSLQKLEEQILHLCEMFEV 81


>sp|B0TXA0|ACCA_FRAP2 Acetyl-coenzyme A carboxylase carboxyl
transferase subunit alpha OS=Francisella philomiragia
subsp. philomiragia (strain ATCC 25017) GN=accA PE=3
SV=1
Length = 315

Score = 29.6 bits (65), Expect = 4.9
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -3

Query: 224 KERVRELEDKVLSCSDLEERKKLEDEILHLATK 126
+ +++E+EDK+ S S + E +K E EI L K
Sbjct: 7 ESKIKEIEDKITSLSHVYEDEKTESEIKKLGKK 39


>sp|P51834|SMC_BACSU Chromosome partition protein smc OS=Bacillus
subtilis GN=smc PE=1 SV=2
Length = 1186

Score = 29.3 bits (64), Expect = 6.4
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Frame = -3

Query: 296 HMHHVVRLTGEQITLAGVIHTLAAKE-------RVRELEDKVLSCSDLEERKK-LEDEIL 141
H + +V L G+ + G + A K+ R RELED +++EE+ LE E+
Sbjct: 642 HRYRIVTLEGDVVNPGGSMTGGAVKKKNNSLLGRSRELEDVTKRLAEMEEKTALLEQEVK 701

Query: 140 HLATKYSLSSCRTKFCD 90
L K+S+ K D
Sbjct: 702 TL--KHSIQDMEKKLAD 716


>sp|Q9UKK3|PARP4_HUMAN Poly [ADP-ribose] polymerase 4 OS=Homo sapiens
GN=PARP4 PE=1 SV=2
Length = 1724

Score = 29.3 bits (64), Expect = 6.4
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Frame = -3

Query: 284 VVRLTGEQITLAGVIHTLAAKERVRELEDKVLSCSDLEERKK---LEDEILHLATKYSLS 114
+V T Q T +IH LAA+ +R+ ED +L ++ K L+ I+ L+ + SL
Sbjct: 1110 MVSTTELQKTTGTMIHKLAARALIRDYEDGILHENETSHEMKKQTLKSLIIKLSKENSLI 1169

Query: 113 SCRTKF 96
+ T F
Sbjct: 1170 TQFTSF 1175


>sp|P26822|CH10_CLOPE 10 kDa chaperonin OS=Clostridium perfringens
GN=groS PE=3 SV=1
Length = 94

Score = 29.3 bits (64), Expect = 6.4
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = -3

Query: 284 VVRLTGEQITLAGVIHTLAAKERVRELEDKVLSCSDLEERKKLEDEI 144
+ RL E+ T +G+I T AKER +E E + + + K+ E E+
Sbjct: 12 IKRLEAEETTKSGIIVTGTAKERPQEAEVVAVGPGAIVDGKRTEMEV 58


>sp|Q0TN26|CH10_CLOP1 10 kDa chaperonin OS=Clostridium perfringens
(strain ATCC 13124 / NCTC 8237 / Type A) GN=groS PE=3
SV=1
Length = 94

Score = 29.3 bits (64), Expect = 6.4
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = -3

Query: 284 VVRLTGEQITLAGVIHTLAAKERVRELEDKVLSCSDLEERKKLEDEI 144
+ RL E+ T +G+I T AKER +E E + + + K+ E E+
Sbjct: 12 IKRLEAEETTKSGIIVTGTAKERPQEAEVVAVGPGAIVDGKRTEMEV 58


>sp|Q95UN8|M3KSL_DROME Mitogen-activated protein kinase kinase
kinase OS=Drosophila melanogaster GN=slpr PE=1 SV=1
Length = 1161

Score = 28.9 bits (63), Expect = 8.3
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = -3

Query: 344 EIRITACSNHHLEKDQHMHHVVRLTGEQITLAGVIHTLAAKER-VRELEDKVLSCSDLEE 168
++ ACS L + H++ ++I AGV+H L KE+ +R E+++L + E+
Sbjct: 398 QLESIACSKFTLTPQESFHYMQECWRKEI--AGVLHDLREKEKELRNKEEQLLRVQN-EQ 454

Query: 167 RKK 159
R+K
Sbjct: 455 REK 457


tr_hit_id Q9C843
Definition tr|Q9C843|Q9C843_ARATH Putative uncharacterized protein F8D11.10 OS=Arabidopsis thaliana
Align length 43
Score (bit) 37.0
E-value 0.49
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917534|Adiantum capillus-veneris mRNA, clone:
YMU001_000102_A10.
(373 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q9C843|Q9C843_ARATH Putative uncharacterized protein F8D11.10... 37 0.49
tr|Q54DV3|Q54DV3_DICDI Putative uncharacterized protein OS=Dicty... 36 1.1
tr|Q5BCW5|Q5BCW5_EMENI Putative uncharacterized protein OS=Emeri... 36 1.1
tr|B6EM25|B6EM25_ALISL Membrane associated GGDEF protein OS=Alii... 35 1.9
tr|A3KGI4|A3KGI4_MOUSE Cancer susceptibility candidate 5 OS=Mus ... 33 5.4
tr|A3KGI3|A3KGI3_MOUSE Cancer susceptibility candidate 5 OS=Mus ... 33 5.4
tr|Q2K8G6|Q2K8G6_RHIEC Probable sugar ABC transporter, ATP-bindi... 33 7.1
tr|Q4DZQ1|Q4DZQ1_TRYCR Putative uncharacterized protein OS=Trypa... 33 9.2
tr|B4L8G2|B4L8G2_DROMO GI14407 OS=Drosophila mojavensis GN=GI144... 33 9.2

>tr|Q9C843|Q9C843_ARATH Putative uncharacterized protein F8D11.10
OS=Arabidopsis thaliana GN=At1g42700 PE=4 SV=1
Length = 149

Score = 37.0 bits (84), Expect = 0.49
Identities = 17/43 (39%), Positives = 29/43 (67%)
Frame = -3

Query: 257 TLAGVIHTLAAKERVRELEDKVLSCSDLEERKKLEDEILHLAT 129
TL+ L+ RVRELEDK++ SDLE++ +E+++++T
Sbjct: 79 TLSKEQEVLSLNNRVRELEDKLVKMSDLEDKVDKMNEVIYIST 121


>tr|Q54DV3|Q54DV3_DICDI Putative uncharacterized protein
OS=Dictyostelium discoideum GN=DDB_0184163 PE=4 SV=1
Length = 918

Score = 35.8 bits (81), Expect = 1.1
Identities = 20/54 (37%), Positives = 33/54 (61%)
Frame = -3

Query: 257 TLAGVIHTLAAKERVRELEDKVLSCSDLEERKKLEDEILHLATKYSLSSCRTKF 96
T + IHTLAA + +++LE+ S+ +E+K +D+I+ L KY L S T +
Sbjct: 560 TNSNQIHTLAAFKHIQDLEE-----SERKEKKDNKDKIVELGKKYGLVSKHTSY 608


>tr|Q5BCW5|Q5BCW5_EMENI Putative uncharacterized protein
OS=Emericella nidulans GN=AN1615.2 PE=4 SV=1
Length = 636

Score = 35.8 bits (81), Expect = 1.1
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Frame = -3

Query: 365 QEVDFDCEIRITACSNHHLEKDQHMHHVVRLTGEQITLAGVIHTLAAKERVRELEDKVL- 189
+E+ CE S+ + H + R+ +Q T+ G IH L ++ +V + + L
Sbjct: 279 EELGARCETLTRDVSDLRDVRHHHEDEIRRMKQQQDTMTGAIHHLTSEVQVEQKRSEQLQ 338

Query: 188 -SCSDLEERKK-LEDEILHLATKYS 120
S SDLE+++ L +++ HL +Y+
Sbjct: 339 SSVSDLEQKRDGLNNQLQHLQGEYN 363


>tr|B6EM25|B6EM25_ALISL Membrane associated GGDEF protein
OS=Aliivibrio salmonicida (strain LFI1238) GN=VSAL_I2704
PE=4 SV=1
Length = 629

Score = 35.0 bits (79), Expect = 1.9
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Frame = -3

Query: 275 LTGEQITLAGVIHTLAAKERVRELEDKVLSCSDLEERKKLEDEILHLATKYSLSSC--RT 102
L ++ L+ ++ K + ++++ +LS D+ +RK LE E+ +L+ K SLS C R
Sbjct: 428 LNKDEKKLSLLVRIQVVKNKRKDIQYYILSYIDITQRKLLEKELRYLSEKDSLSDCWNRR 487

Query: 101 KF 96
KF
Sbjct: 488 KF 489


>tr|A3KGI4|A3KGI4_MOUSE Cancer susceptibility candidate 5 OS=Mus
musculus GN=Casc5 PE=4 SV=1
Length = 1612

Score = 33.5 bits (75), Expect = 5.4
Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
Frame = -3

Query: 371 EGQEVDFDCEIRITACSNHHLEKDQHMHHVVRLTGEQITL---AGVIHTLAAKERVRELE 201
EG E D D T NH D+H H+V L G T+ G + + LE
Sbjct: 730 EGNEGDMDITKSCTVKINHRSLLDKHDSHLVSLAGTSKTILHARGQVEMEINRSHTTPLE 789

Query: 200 DKVLSCSDL 174
K++S SD+
Sbjct: 790 CKIISPSDI 798


>tr|A3KGI3|A3KGI3_MOUSE Cancer susceptibility candidate 5 OS=Mus
musculus GN=Casc5 PE=4 SV=1
Length = 2119

Score = 33.5 bits (75), Expect = 5.4
Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
Frame = -3

Query: 371 EGQEVDFDCEIRITACSNHHLEKDQHMHHVVRLTGEQITL---AGVIHTLAAKERVRELE 201
EG E D D T NH D+H H+V L G T+ G + + LE
Sbjct: 730 EGNEGDMDITKSCTVKINHRSLLDKHDSHLVSLAGTSKTILHARGQVEMEINRSHTTPLE 789

Query: 200 DKVLSCSDL 174
K++S SD+
Sbjct: 790 CKIISPSDI 798


>tr|Q2K8G6|Q2K8G6_RHIEC Probable sugar ABC transporter, ATP-binding
protein OS=Rhizobium etli (strain CFN 42 / ATCC 51251)
GN=RHE_CH02086 PE=3 SV=1
Length = 507

Score = 33.1 bits (74), Expect = 7.1
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = -3

Query: 287 HVVRLTGEQITLAGVIHTLAAKERVRE 207
H+ LTGE+IT AG++ +AA E +E
Sbjct: 479 HIAELTGERITAAGIVDAIAAAEHKKE 505


>tr|Q4DZQ1|Q4DZQ1_TRYCR Putative uncharacterized protein
OS=Trypanosoma cruzi GN=Tc00.1047053507711.270 PE=4 SV=1
Length = 212

Score = 32.7 bits (73), Expect = 9.2
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = -3

Query: 311 LEKDQHMHHVVRLTGEQITLAGVIHTLAAKERVRELEDKVLSCSDLEERKKLE 153
LE+ QH V + + + H A RVRELE + S SD E+R++L+
Sbjct: 85 LERSQHQLGVSFVNSQALDDEWRKHNAAVLGRVRELEQLIASTSDSEKREELQ 137


>tr|B4L8G2|B4L8G2_DROMO GI14407 OS=Drosophila mojavensis GN=GI14407
PE=4 SV=1
Length = 1225

Score = 32.7 bits (73), Expect = 9.2
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Frame = -3

Query: 344 EIRITACSNHHLEKDQHMHHVVRLTGEQITLAGVIHTLAAKE---RVRELEDKVLSCSDL 174
++ +ACS L + HH+ L ++I A V+H L KE R +E + K++ L
Sbjct: 379 QLESSACSKFTLTPQESFHHLQELWKKEI--AEVLHDLREKEKELRNKEEQLKLMQKKQL 436

Query: 173 EERKKLED 150
E+ KL++
Sbjct: 437 EKANKLQE 444