BP917536 |
Clone id |
YMU001_000102_A12 |
Library |
YMU01 |
Length |
303 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000102_A12. |
Accession |
BP917536 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
TGCACATTAAGCCGTAGAAGCGAACTTCTGGTTGTGTATGGAAAATCACAGAATACCACC AGCTTTTCTGCGCCTTGTAGCATTTGACATTGCTATTTCACCGAATCTATCTTCATTATT GTCGACTGTTCGGCCTGGTGCTGGAATATAATGACGCAGCCAGACACCGACGTACCACTG CTGAGGACGCATAATCTTCGTGTCAGGGTCGTCTAATGACTCTTTCCAATGTGCAAGATA TCCGGCCATTCGAGGGATGGCAAAAAGGACCGTGAAATACTCAGGAGGAAAACCTAAGGC TCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9LXS6 |
Definition |
sp|Q9LXS6|CISY2_ARATH Citrate synthase 2, peroxisomal OS=Arabidopsis thaliana |
Align length |
84 |
Score (bit) |
132.0 |
E-value |
5.0e-31 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917536|Adiantum capillus-veneris mRNA, clone: YMU001_000102_A12. (303 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q9LXS6|CISY2_ARATH Citrate synthase 2, peroxisomal OS=Arabido... 132 5e-31 sp|Q9SJH7|CISY3_ARATH Citrate synthase 3, peroxisomal OS=Arabido... 130 3e-30 sp|P49299|CYSZ_CUCMA Citrate synthase, glyoxysomal OS=Cucurbita ... 129 3e-30 sp|Q8MQU6|CISYP_DICDI Citrate synthase, peroxisomal OS=Dictyoste... 81 1e-15 sp|Q9LXS7|CISY1_ARATH Citrate synthase 1, peroxisomal OS=Arabido... 72 9e-13 sp|P51033|CISY_BARHE Citrate synthase OS=Bartonella henselae GN=... 70 4e-12 sp|Q86AV6|CISYC_DICDI Citrate synthase OS=Dictyostelium discoide... 70 4e-12 sp|P51038|CISY2_RHITR Citrate synthase, plasmid OS=Rhizobium tro... 69 1e-11 sp|O33915|CISY_RHIME Citrate synthase OS=Rhizobium meliloti GN=g... 68 1e-11 sp|P51037|CISY1_RHITR Citrate synthase, chromosomal OS=Rhizobium... 67 4e-11 sp|P51034|CISY_BARQU Citrate synthase OS=Bartonella quintana GN=... 66 6e-11 sp|Q10530|CISY1_MYCTU Citrate synthase 1 OS=Mycobacterium tuberc... 65 8e-11 sp|P94325|CISY_BRAJA Citrate synthase OS=Bradyrhizobium japonicu... 63 5e-10 sp|Q1RGV8|CISY_RICBR Citrate synthase OS=Rickettsia bellii (stra... 62 1e-09 sp|P20901|CISY_ACEAC Citrate synthase OS=Acetobacter aceti GN=aa... 62 1e-09 sp|P51043|CISY_RICTY Citrate synthase OS=Rickettsia typhi GN=glt... 61 2e-09 sp|P09948|CISY_RICPR Citrate synthase OS=Rickettsia prowazekii G... 61 2e-09 sp|P51040|CISY_RICFE Citrate synthase OS=Rickettsia felis GN=glt... 61 2e-09 sp|P51042|CISY_RICCN Citrate synthase OS=Rickettsia conorii GN=g... 61 2e-09 sp|P42457|CISY_CORGL Citrate synthase OS=Corynebacterium glutami... 59 6e-09 sp|Q59977|CISY_SYNY3 Citrate synthase OS=Synechocystis sp. (stra... 57 4e-08 sp|Q59734|CISY_RICBE Citrate synthase (Fragment) OS=Rickettsia b... 54 2e-07 sp|P18789|CISY_COXBU Citrate synthase OS=Coxiella burnetii GN=gl... 54 2e-07 sp|P51045|CISY_THIFE Citrate synthase OS=Thiobacillus ferrooxida... 54 3e-07 sp|Q59776|CISY_RICSL Citrate synthase (Fragment) OS=Rickettsia s... 53 5e-07 sp|Q59778|CISY_RICSI Citrate synthase (Fragment) OS=Rickettsia s... 53 5e-07 sp|Q59768|CISY_RICRH Citrate synthase (Fragment) OS=Rickettsia r... 53 5e-07 sp|Q59759|CISY_RICPA Citrate synthase (Fragment) OS=Rickettsia p... 53 5e-07 sp|Q59748|CISY_RICMA Citrate synthase (Fragment) OS=Rickettsia m... 53 5e-07 sp|Q59742|CISY_RICJA Citrate synthase (Fragment) OS=Rickettsia j... 53 5e-07
>sp|Q9LXS6|CISY2_ARATH Citrate synthase 2, peroxisomal OS=Arabidopsis thaliana GN=CSY2 PE=2 SV=1 Length = 514
Score = 132 bits (332), Expect = 5e-31 Identities = 58/84 (69%), Positives = 75/84 (89%), Gaps = 2/84 (2%) Frame = -1
Query: 303 RALGFPPEYFTVLFAIPRMAGYLAHWKESLDDPDTKIMRPQQWYVGVWLRHYIPAPGRTV 124 RA+GFPPE+FTVLFA+PRMAGYL+HW+ESLDDPDT+IMRPQQ Y GVW+RHY P RT+ Sbjct: 427 RAMGFPPEFFTVLFAVPRMAGYLSHWRESLDDPDTRIMRPQQAYTGVWMRHYEPVRERTL 486
Query: 123 --DNNEDRFGEIAMSNATRRRKAG 58 D+++D+FG++++SNA+RRR AG Sbjct: 487 SSDSDKDKFGQVSISNASRRRLAG 510
>sp|Q9SJH7|CISY3_ARATH Citrate synthase 3, peroxisomal OS=Arabidopsis thaliana GN=CSY3 PE=1 SV=1 Length = 509
Score = 130 bits (326), Expect = 3e-30 Identities = 61/85 (71%), Positives = 70/85 (82%), Gaps = 3/85 (3%) Frame = -1
Query: 303 RALGFPPEYFTVLFAIPRMAGYLAHWKESLDDPDTKIMRPQQWYVGVWLRHYIPAPGRTV 124 RA+GFPPE+FTVLFAIPRMAGYL+HWKESLDDPDTKIMRPQQ Y GVWLRHY P R V Sbjct: 422 RAMGFPPEFFTVLFAIPRMAGYLSHWKESLDDPDTKIMRPQQVYTGVWLRHYTPVRERIV 481
Query: 123 DNN---EDRFGEIAMSNATRRRKAG 58 ++ D+ G++A SNA+RRR AG Sbjct: 482 TDDSKESDKLGQVATSNASRRRLAG 506
>sp|P49299|CYSZ_CUCMA Citrate synthase, glyoxysomal OS=Cucurbita maxima PE=1 SV=1 Length = 516
Score = 129 bits (325), Expect = 3e-30 Identities = 58/82 (70%), Positives = 69/82 (84%) Frame = -1
Query: 303 RALGFPPEYFTVLFAIPRMAGYLAHWKESLDDPDTKIMRPQQWYVGVWLRHYIPAPGRTV 124 RA+GFPPE+FTVLFAIPRMAGYLAHW+ESLDDPDTKI+RPQQ Y G WLRHYIP R V Sbjct: 432 RAMGFPPEFFTVLFAIPRMAGYLAHWRESLDDPDTKIIRPQQVYTGEWLRHYIPPNERLV 491
Query: 123 DNNEDRFGEIAMSNATRRRKAG 58 DR G++++SNA++RR +G Sbjct: 492 PAKADRLGQVSVSNASKRRLSG 513
>sp|Q8MQU6|CISYP_DICDI Citrate synthase, peroxisomal OS=Dictyostelium discoideum GN=cshA PE=2 SV=1 Length = 492
Score = 81.3 bits (199), Expect = 1e-15 Identities = 34/58 (58%), Positives = 43/58 (74%) Frame = -1
Query: 303 RALGFPPEYFTVLFAIPRMAGYLAHWKESLDDPDTKIMRPQQWYVGVWLRHYIPAPGR 130 +A+GFP + F VLF IPR G+LAHW E L+DP+TKI RP+Q Y G W R+Y+P GR Sbjct: 410 KAMGFPTDMFPVLFTIPRAVGWLAHWVEHLEDPETKIYRPRQVYKGEWFRNYVPIDGR 467
>sp|Q9LXS7|CISY1_ARATH Citrate synthase 1, peroxisomal OS=Arabidopsis thaliana GN=CSY1 PE=2 SV=1 Length = 480
Score = 72.0 bits (175), Expect = 9e-13 Identities = 34/59 (57%), Positives = 41/59 (69%) Frame = -1
Query: 303 RALGFPPEYFTVLFAIPRMAGYLAHWKESLDDPDTKIMRPQQWYVGVWLRHYIPAPGRT 127 RA+G P + A+ R+AGYL+HW+ESLDDPDTKIMRPQQ Y G +RHY RT Sbjct: 424 RAMGIPSSFT----AVSRIAGYLSHWRESLDDPDTKIMRPQQVYTGAGIRHYETVRERT 478
>sp|P51033|CISY_BARHE Citrate synthase OS=Bartonella henselae GN=gltA PE=3 SV=1 Length = 431
Score = 69.7 bits (169), Expect = 4e-12 Identities = 32/58 (55%), Positives = 39/58 (67%) Frame = -1
Query: 303 RALGFPPEYFTVLFAIPRMAGYLAHWKESLDDPDTKIMRPQQWYVGVWLRHYIPAPGR 130 +ALGFP E FTVLFA+ R G++A WKE ++DP KI RP+Q Y G R YIP R Sbjct: 372 KALGFPTEMFTVLFALARSVGWVAQWKEMIEDPAQKISRPRQLYTGYAAREYIPIDKR 429
>sp|Q86AV6|CISYC_DICDI Citrate synthase OS=Dictyostelium discoideum GN=gltA PE=3 SV=1 Length = 512
Score = 69.7 bits (169), Expect = 4e-12 Identities = 33/80 (41%), Positives = 49/80 (61%) Frame = -1
Query: 303 RALGFPPEYFTVLFAIPRMAGYLAHWKESLDDPDTKIMRPQQWYVGVWLRHYIPAPGRTV 124 +++GFP + F VLF+IPR AG+LAHW E L DP+ +I RP+Q Y+G +Y+P R V Sbjct: 391 KSMGFPTDMFPVLFSIPRAAGWLAHWVEELADPELRIFRPRQIYMGRRNMNYVPMDARQV 450
Query: 123 DNNEDRFGEIAMSNATRRRK 64 + + S+ RR+ Sbjct: 451 QQHNSGEKLSSFSSGFDRRR 470
>sp|P51038|CISY2_RHITR Citrate synthase, plasmid OS=Rhizobium tropici GN=pcsA PE=3 SV=1 Length = 429
Score = 68.6 bits (166), Expect = 1e-11 Identities = 30/58 (51%), Positives = 39/58 (67%) Frame = -1
Query: 303 RALGFPPEYFTVLFAIPRMAGYLAHWKESLDDPDTKIMRPQQWYVGVWLRHYIPAPGR 130 +ALGFP FTVLFA+ R G++A W E ++DPD +I RP+Q Y G LR Y+P R Sbjct: 372 KALGFPTTMFTVLFALARTVGWIAQWNEMIEDPDQRIGRPRQLYTGAPLREYVPLSKR 429
>sp|O33915|CISY_RHIME Citrate synthase OS=Rhizobium meliloti GN=gltA PE=3 SV=2 Length = 429
Score = 68.2 bits (165), Expect = 1e-11 Identities = 30/58 (51%), Positives = 40/58 (68%) Frame = -1
Query: 303 RALGFPPEYFTVLFAIPRMAGYLAHWKESLDDPDTKIMRPQQWYVGVWLRHYIPAPGR 130 +ALGFP FTVLFA+ R G++A W E ++DP+ +I RP+Q YVG LR Y+P R Sbjct: 372 KALGFPTTMFTVLFALARTVGWIAQWNEMIEDPEQRIGRPRQLYVGAPLRDYVPISKR 429
>sp|P51037|CISY1_RHITR Citrate synthase, chromosomal OS=Rhizobium tropici GN=ccsA PE=3 SV=2 Length = 429
Score = 66.6 bits (161), Expect = 4e-11 Identities = 29/58 (50%), Positives = 38/58 (65%) Frame = -1
Query: 303 RALGFPPEYFTVLFAIPRMAGYLAHWKESLDDPDTKIMRPQQWYVGVWLRHYIPAPGR 130 +ALGFP FTVLFA+ R G++A W E ++DPD +I RP+ Y G LR Y+P R Sbjct: 372 KALGFPTTMFTVLFALARTVGWIAQWNEMIEDPDQRIGRPRHVYTGAPLREYVPVSKR 429
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B0M1B8 |
Definition |
tr|B0M1B8|B0M1B8_SOYBN Citrate synthase OS=Glycine max |
Align length |
82 |
Score (bit) |
133.0 |
E-value |
5.0e-30 |
Report |
|