BP917543 |
Clone id |
YMU001_000102_B09 |
Library |
YMU01 |
Length |
269 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000102_B09. |
Accession |
BP917543 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL2539Contig1 |
Sequence |
AATTCGCGGCCGCGAATATTCGCTTATGTACATTGGCTTGTCTTCTTCATTATTTGGATA GCTTCTAGGTTACCGCTGCCCTTGAGCCGAAGAACGGCATTCACTGCAAGATTGCCGAAG TGCACCTTGTCTTATGACAAGATTTCTGAGCTCAATGTGGTCATTGCAATGTTAAGCAAG TCTGTCCGAAACTTTTCTGGGTCGTCTCTGTTATCACGAACCCGTTTCTCAAGGACTCCT CTCGCACACTCAGCTGCCATTCTATATCC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P39076 |
Definition |
sp|P39076|TCPB_YEAST T-complex protein 1 subunit beta OS=Saccharomyces cerevisiae |
Align length |
75 |
Score (bit) |
83.2 |
E-value |
4.0e-16 |
Report |
 |
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9ST99 |
Definition |
tr|A9ST99|A9ST99_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
76 |
Score (bit) |
117.0 |
E-value |
2.0e-25 |
Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917543|Adiantum capillus-veneris mRNA, clone: YMU001_000102_B09. (251 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9ST99|A9ST99_PHYPA Predicted protein OS=Physcomitrella paten... 117 2e-25 tr|A9TSP4|A9TSP4_PHYPA Predicted protein OS=Physcomitrella paten... 115 1e-24 tr|B8AWH0|B8AWH0_ORYSI Putative uncharacterized protein OS=Oryza... 108 1e-22 tr|Q940P8|Q940P8_ARATH AT5g20890/F22D1_60 (Putative uncharacteri... 106 5e-22 tr|A7NVR6|A7NVR6_VITVI Chromosome chr18 scaffold_1, whole genome... 105 9e-22 tr|A5C537|A5C537_VITVI Putative uncharacterized protein OS=Vitis... 105 9e-22 tr|A2XJL6|A2XJL6_ORYSI Putative uncharacterized protein OS=Oryza... 104 3e-21 tr|A8J524|A8J524_CHLRE T-complex protein 1, beta subunit OS=Chla... 103 6e-21 tr|B6T8X5|B6T8X5_MAIZE T-complex protein 1 subunit beta OS=Zea m... 102 7e-21 tr|Q6AV23|Q6AV23_ORYSJ Os03g0619400 protein OS=Oryza sativa subs... 102 1e-20 tr|Q10GP3|Q10GP3_ORYSJ T-complex protein 1, beta subunit, putati... 96 1e-18 tr|Q2N143|Q2N143_9METZ Chaperonin complex component TCP-1 beta s... 93 6e-18 tr|Q013D6|Q013D6_OSTTA Putative TCP-1/cpn60 chaperonin family pr... 91 3e-17 tr|A4S1J1|A4S1J1_OSTLU Predicted protein OS=Ostreococcus lucimar... 89 1e-16 tr|Q7Q1P2|Q7Q1P2_ANOGA AGAP009694-PA (Fragment) OS=Anopheles gam... 89 1e-16 tr|A8P7V3|A8P7V3_COPC7 Putative uncharacterized protein OS=Copri... 89 1e-16 tr|A3LTV5|A3LTV5_PICST Predicted protein OS=Pichia stipitis GN=P... 88 2e-16 tr|B8P3Z8|B8P3Z8_9APHY Predicted protein (Fragment) OS=Postia pl... 87 3e-16 tr|Q8AVB7|Q8AVB7_XENLA Cct2-prov protein OS=Xenopus laevis GN=cc... 87 4e-16 tr|Q2N199|Q2N199_PLADU Chaperonin complex component TCP-1 beta s... 86 7e-16 tr|Q2N176|Q2N176_PRICU Chaperonin complex component TCP-1 beta s... 86 7e-16 tr|A9V3N2|A9V3N2_MONBE Predicted protein OS=Monosiga brevicollis... 86 7e-16 tr|Q5KP40|Q5KP40_CRYNE T-complex protein 1, beta subunit (Tcp-1-... 86 7e-16 tr|Q6DIK2|Q6DIK2_XENTR Chaperonin containing TCP1, subunit 2 (Be... 86 1e-15 tr|Q4P0X8|Q4P0X8_USTMA Putative uncharacterized protein OS=Ustil... 86 1e-15 tr|B0D6Q0|B0D6Q0_LACBS Predicted protein OS=Laccaria bicolor (st... 86 1e-15 tr|Q0ZBX5|Q0ZBX5_GRYFI Putative accessory gland protein (Fragmen... 85 2e-15 tr|Q0ZBX4|Q0ZBX4_9ORTH Putative accessory gland protein (Fragmen... 85 2e-15 tr|A7T514|A7T514_NEMVE Predicted protein OS=Nematostella vectens... 85 2e-15 tr|A7SMT4|A7SMT4_NEMVE Predicted protein (Fragment) OS=Nematoste... 85 2e-15
>tr|A9ST99|A9ST99_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_215543 PE=3 SV=1 Length = 528
Score = 117 bits (294), Expect = 2e-25 Identities = 61/76 (80%), Positives = 67/76 (88%) Frame = -1
Query: 251 GYRMAAECARGVLEKRVRDNRDDPEKFRTDLLNIAMTTLSSEILS*DKVHFGNLAVNAVL 72 GYRMAAE AR LE VRDNRDD EKFR+DL+NIAMTTLSS+ILS DKVHF NLAV+AVL Sbjct: 125 GYRMAAEAARSALEAAVRDNRDDFEKFRSDLVNIAMTTLSSKILSQDKVHFANLAVDAVL 184
Query: 71 RLKGSGNLEAIQIMKK 24 RLKGS N+EAIQI+KK Sbjct: 185 RLKGSSNMEAIQIIKK 200
>tr|A9TSP4|A9TSP4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_197847 PE=3 SV=1 Length = 528
Score = 115 bits (288), Expect = 1e-24 Identities = 59/76 (77%), Positives = 67/76 (88%) Frame = -1
Query: 251 GYRMAAECARGVLEKRVRDNRDDPEKFRTDLLNIAMTTLSSEILS*DKVHFGNLAVNAVL 72 GYRMAAE AR LE VRDN+DD E+FR+DL+NIAMTTLSS+ILS DKVHF NLAV+AVL Sbjct: 125 GYRMAAEAARSALEAAVRDNKDDLERFRSDLVNIAMTTLSSKILSQDKVHFSNLAVDAVL 184
Query: 71 RLKGSGNLEAIQIMKK 24 RLKGS NLE+IQI+KK Sbjct: 185 RLKGSSNLESIQIIKK 200
>tr|B8AWH0|B8AWH0_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_20931 PE=4 SV=1 Length = 526
Score = 108 bits (270), Expect = 1e-22 Identities = 55/77 (71%), Positives = 66/77 (85%) Frame = -1
Query: 251 GYRMAAECARGVLEKRVRDNRDDPEKFRTDLLNIAMTTLSSEILS*DKVHFGNLAVNAVL 72 G+RMAAECAR L +R DN++D +KFR+DL+NIAMTTLSS+ILS DK +F LAV+AVL Sbjct: 123 GFRMAAECARDALLQRAMDNKEDSDKFRSDLMNIAMTTLSSKILSQDKEYFAGLAVDAVL 182
Query: 71 RLKGSGNLEAIQIMKKT 21 RLKGS NLEAIQI+KKT Sbjct: 183 RLKGSTNLEAIQILKKT 199
>tr|Q940P8|Q940P8_ARATH AT5g20890/F22D1_60 (Putative uncharacterized protein At5g20890) (T-complex protein 1, beta subunit) (Putative uncharacterized protein) OS=Arabidopsis thaliana GN=At5g20890 PE=2 SV=1 Length = 527
Score = 106 bits (265), Expect = 5e-22 Identities = 55/76 (72%), Positives = 63/76 (82%) Frame = -1
Query: 251 GYRMAAECARGVLEKRVRDNRDDPEKFRTDLLNIAMTTLSSEILS*DKVHFGNLAVNAVL 72 GYRMA+ECAR L KRV DN+D+ EKFR+DLL IAMTTL S+ILS DK HF +AV+AV Sbjct: 124 GYRMASECARNALLKRVIDNKDNAEKFRSDLLKIAMTTLCSKILSQDKEHFAEMAVDAVF 183
Query: 71 RLKGSGNLEAIQIMKK 24 RLKGS NLEAIQI+KK Sbjct: 184 RLKGSTNLEAIQIIKK 199
>tr|A7NVR6|A7NVR6_VITVI Chromosome chr18 scaffold_1, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00015538001 PE=3 SV=1 Length = 527
Score = 105 bits (263), Expect = 9e-22 Identities = 53/76 (69%), Positives = 64/76 (84%) Frame = -1
Query: 251 GYRMAAECARGVLEKRVRDNRDDPEKFRTDLLNIAMTTLSSEILS*DKVHFGNLAVNAVL 72 GYRMAAECAR L ++V DN++D EKF+ DL+ IAMTTLSS+ILS DK HF LAV+AV+ Sbjct: 124 GYRMAAECARNALLQKVMDNKEDAEKFKLDLMKIAMTTLSSKILSQDKEHFAKLAVDAVM 183
Query: 71 RLKGSGNLEAIQIMKK 24 RLKGS NLE+IQI+KK Sbjct: 184 RLKGSTNLESIQIIKK 199
>tr|A5C537|A5C537_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_013560 PE=3 SV=1 Length = 579
Score = 105 bits (263), Expect = 9e-22 Identities = 53/76 (69%), Positives = 64/76 (84%) Frame = -1
Query: 251 GYRMAAECARGVLEKRVRDNRDDPEKFRTDLLNIAMTTLSSEILS*DKVHFGNLAVNAVL 72 GYRMAAECAR L ++V DN++D EKF+ DL+ IAMTTLSS+ILS DK HF LAV+AV+ Sbjct: 176 GYRMAAECARNALLQKVMDNKEDAEKFKLDLMKIAMTTLSSKILSQDKEHFAKLAVDAVM 235
Query: 71 RLKGSGNLEAIQIMKK 24 RLKGS NLE+IQI+KK Sbjct: 236 RLKGSTNLESIQIIKK 251
>tr|A2XJL6|A2XJL6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_12631 PE=3 SV=1 Length = 449
Score = 104 bits (259), Expect = 3e-21 Identities = 53/76 (69%), Positives = 64/76 (84%) Frame = -1
Query: 251 GYRMAAECARGVLEKRVRDNRDDPEKFRTDLLNIAMTTLSSEILS*DKVHFGNLAVNAVL 72 GYRMA ECAR L +R DN+++ +KFR+DL+NIAMTTLSS+ILS DK +F LAV+AVL Sbjct: 122 GYRMAVECARNALLERTMDNKENIDKFRSDLMNIAMTTLSSKILSQDKEYFAELAVDAVL 181
Query: 71 RLKGSGNLEAIQIMKK 24 RLKGS NLEAIQI+KK Sbjct: 182 RLKGSTNLEAIQILKK 197
>tr|A8J524|A8J524_CHLRE T-complex protein 1, beta subunit OS=Chlamydomonas reinhardtii GN=CCT2 PE=3 SV=1 Length = 528
Score = 103 bits (256), Expect = 6e-21 Identities = 52/77 (67%), Positives = 63/77 (81%) Frame = -1
Query: 251 GYRMAAECARGVLEKRVRDNRDDPEKFRTDLLNIAMTTLSSEILS*DKVHFGNLAVNAVL 72 GYR A +CARGVLE +++ D E+FR DLLNIA TTLSS+IL+ DK HF NLAV+A++ Sbjct: 127 GYREACDCARGVLETGAFNHQSDAEQFRQDLLNIAKTTLSSKILTVDKEHFANLAVDAIM 186
Query: 71 RLKGSGNLEAIQIMKKT 21 RLKGSGNLEAI I+KKT Sbjct: 187 RLKGSGNLEAIHIIKKT 203
>tr|B6T8X5|B6T8X5_MAIZE T-complex protein 1 subunit beta OS=Zea mays PE=2 SV=1 Length = 525
Score = 102 bits (255), Expect = 7e-21 Identities = 52/76 (68%), Positives = 64/76 (84%) Frame = -1
Query: 251 GYRMAAECARGVLEKRVRDNRDDPEKFRTDLLNIAMTTLSSEILS*DKVHFGNLAVNAVL 72 GYRMA ECAR L K+ DN+++ +KFR+DL+NIAMTTLSS+ILS DK +F LAV+AVL Sbjct: 122 GYRMALECARDSLLKKTMDNKENTDKFRSDLMNIAMTTLSSKILSQDKEYFAELAVDAVL 181
Query: 71 RLKGSGNLEAIQIMKK 24 RLKGS NLE+IQI+KK Sbjct: 182 RLKGSTNLESIQILKK 197
>tr|Q6AV23|Q6AV23_ORYSJ Os03g0619400 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0063J18.19 PE=3 SV=1 Length = 525
Score = 102 bits (254), Expect = 1e-20 Identities = 52/75 (69%), Positives = 63/75 (84%) Frame = -1
Query: 251 GYRMAAECARGVLEKRVRDNRDDPEKFRTDLLNIAMTTLSSEILS*DKVHFGNLAVNAVL 72 GYRMA ECAR L +R DN+++ +KFR+DL+NIAMTTLSS+ILS DK +F LAV+AVL Sbjct: 122 GYRMAVECARNALLERTMDNKENIDKFRSDLMNIAMTTLSSKILSQDKEYFAELAVDAVL 181
Query: 71 RLKGSGNLEAIQIMK 27 RLKGS NLEAIQI+K Sbjct: 182 RLKGSTNLEAIQILK 196
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