BP917545 |
Clone id |
YMU001_000102_C01 |
Library |
YMU01 |
Length |
516 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000102_C01. |
Accession |
BP917545 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CGTGCTTTTTCCGATCGTATTCCATAGCTTCAGTACACTCAGATCGCCAATGACTATCCC CCAAACAGAAAAGGCATGTCTTGGGGCGATTAGGATCTCGGCCACCTCTTCCGCGGCCTC GTCCTCCCCCTTGACCCCGTCCTCCTACTTGACCTTGCAGAGGCGGCTCTGGTGTATGAG CATGAGCCATCGCCACAGCAGGCTCTTGTCCCTGCCCTATCTGTGGTTGTTGCCAGGTAG AAGAGTCCCCTCATCTGCGACGACCCCGGCCATTGAAATAACATTCCAATGTATTATGAG TATTGGTCGTGCAAATCGCACACCACTTCTGATTCATTGCACATTCCTGAGCAGCATGGC CCGGATTCCGACATTGGGTACACCAGATTTCCTTTAGACTTTTAGCCACTGCAGCCGATT CCGTTGATCCGGAGGATACACCTTTCCCGTGACGCTGGGATTTTTTCCGTGGTGTCTCTT TGGATTCTTTTTCTGAATCGTTGTTGCCTGAGTCCG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O01836 |
Definition |
sp|O01836|GLH3_CAEEL ATP-dependent RNA helicase glh-3 OS=Caenorhabditis elegans |
Align length |
34 |
Score (bit) |
35.4 |
E-value |
0.16 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q6ZG47 |
Definition |
tr|Q6ZG47|Q6ZG47_ORYSJ Putative uncharacterized protein OJ1111_E05.15 OS=Oryza sativa subsp. japonica |
Align length |
74 |
Score (bit) |
52.4 |
E-value |
1.0e-05 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917545|Adiantum capillus-veneris mRNA, clone: YMU001_000102_C01. (516 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q6ZG47|Q6ZG47_ORYSJ Putative uncharacterized protein OJ1111_E... 52 1e-05 tr|B8BBV2|B8BBV2_ORYSI Putative uncharacterized protein OS=Oryza... 52 1e-05 tr|Q6CHX6|Q6CHX6_YARLI YALI0A03751p OS=Yarrowia lipolytica GN=YA... 41 0.031 tr|A3BLR4|A3BLR4_ORYSJ Putative uncharacterized protein OS=Oryza... 39 0.15 tr|Q9FH11|Q9FH11_ARATH Mutator-like transposase-like OS=Arabidop... 39 0.20 tr|A5E1K1|A5E1K1_LODEL Putative uncharacterized protein OS=Lodde... 38 0.34 tr|Q2UHU0|Q2UHU0_ASPOR Predicted protein OS=Aspergillus oryzae G... 37 0.44 tr|B8N8D5|B8N8D5_ASPFL Noc1p protein, putative OS=Aspergillus fl... 37 0.44 tr|Q6EIC6|Q6EIC6_HYAOR Putative zinc finger protein OS=Hyacinthu... 37 0.58 tr|Q677E2|Q677E2_HYAOR Ring zinc finger protein (Fragment) OS=Hy... 37 0.58 tr|Q10BE5|Q10BE5_ORYSJ Os03g0820700 protein OS=Oryza sativa subs... 37 0.75 tr|Q0DCJ3|Q0DCJ3_ORYSJ Os06g0321900 protein OS=Oryza sativa subs... 37 0.75 tr|B8BL49|B8BL49_ORYSI Putative uncharacterized protein OS=Oryza... 37 0.75 tr|B8AMB3|B8AMB3_ORYSI Putative uncharacterized protein OS=Oryza... 37 0.75 tr|Q5KQE3|Q5KQE3_ORYSJ cDNA clone:J023062D21, full insert sequen... 36 0.98 tr|Q53KQ2|Q53KQ2_ORYSJ Zinc knuckle family protein OS=Oryza sati... 36 0.98 tr|Q2QSN5|Q2QSN5_ORYSJ Retrotransposon protein, putative, Ty3-gy... 36 0.98 tr|B8AWJ1|B8AWJ1_ORYSI Putative uncharacterized protein OS=Oryza... 36 0.98 tr|B8AH41|B8AH41_ORYSI Putative uncharacterized protein OS=Oryza... 36 0.98 tr|A9S137|A9S137_PHYPA Predicted protein OS=Physcomitrella paten... 36 0.98 tr|A3AZ12|A3AZ12_ORYSJ Putative uncharacterized protein OS=Oryza... 36 0.98 tr|A7AWD1|A7AWD1_BABBO Zinc knuckle domain containing protein OS... 36 0.98 tr|B6SWI3|B6SWI3_MAIZE Putative uncharacterized protein OS=Zea m... 36 1.3 tr|A4RXZ9|A4RXZ9_OSTLU Predicted protein OS=Ostreococcus lucimar... 36 1.3 tr|A3A6D6|A3A6D6_ORYSJ Putative uncharacterized protein OS=Oryza... 36 1.3 tr|A2ZBM0|A2ZBM0_ORYSI Putative uncharacterized protein OS=Oryza... 36 1.3 tr|B8B849|B8B849_ORYSI Putative uncharacterized protein OS=Oryza... 35 1.7 tr|A9U4U9|A9U4U9_PHYPA Predicted protein OS=Physcomitrella paten... 35 1.7 tr|A9U408|A9U408_PHYPA Predicted protein OS=Physcomitrella paten... 35 1.7 tr|B3RSN3|B3RSN3_TRIAD Putative uncharacterized protein OS=Trich... 35 1.7
>tr|Q6ZG47|Q6ZG47_ORYSJ Putative uncharacterized protein OJ1111_E05.15 OS=Oryza sativa subsp. japonica GN=OJ1111_E05.15 PE=4 SV=1 Length = 468
Score = 52.4 bits (124), Expect = 1e-05 Identities = 26/74 (35%), Positives = 44/74 (59%) Frame = -3
Query: 499 DSEKESKETPRKKSQRHGKGVSSGSTESAAVAKSLKEIWCTQCRNPGHAAQECAMNQKWC 320 + EK+S+E+ K++ KGV + A + WC +CR+ GH A++C + +K+C Sbjct: 125 NKEKKSEES---KTEGDTKGVVKDGVDKGAQIRK----WCGKCRSMGHIAKDCVV-RKYC 176
Query: 319 AICTTNTHNTLECY 278 IC+ +HNT EC+ Sbjct: 177 VICSKVSHNTDECF 190
>tr|B8BBV2|B8BBV2_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_29594 PE=4 SV=1 Length = 697
Score = 52.4 bits (124), Expect = 1e-05 Identities = 26/74 (35%), Positives = 44/74 (59%) Frame = -3
Query: 499 DSEKESKETPRKKSQRHGKGVSSGSTESAAVAKSLKEIWCTQCRNPGHAAQECAMNQKWC 320 + EK+S+E+ K++ KGV + A + WC +CR+ GH A++C + +K+C Sbjct: 129 NKEKKSEES---KTEGDTKGVVKDGVDKGAQIRK----WCGKCRSMGHIAKDCVV-RKYC 180
Query: 319 AICTTNTHNTLECY 278 IC+ +HNT EC+ Sbjct: 181 VICSKVSHNTDECF 194
>tr|Q6CHX6|Q6CHX6_YARLI YALI0A03751p OS=Yarrowia lipolytica GN=YALI0A03751g PE=4 SV=1 Length = 514
Score = 41.2 bits (95), Expect = 0.031 Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 1/81 (1%) Frame = -3
Query: 514 DSGNNDSEKESKETPRKKSQRHGKGVSSGSTESAAVAKSLKEIWCTQCRNPGHAAQECAM 335 DS + + +T +K ++ G S + ++ K++ C C GH ++C Sbjct: 222 DSVESSTRATGSQT-QKATENFGDQNSQKANKATRTNKTIGVKACFLCNQTGHLVRDCPQ 280
Query: 334 NQ-KWCAICTTNTHNTLECYF 275 Q K+C C TN H+T +C F Sbjct: 281 YQAKFCLHCRTNDHSTADCLF 301
>tr|A3BLR4|A3BLR4_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_023986 PE=4 SV=1 Length = 594
Score = 38.9 bits (89), Expect = 0.15 Identities = 20/69 (28%), Positives = 36/69 (52%) Frame = -3
Query: 478 ETPRKKSQRHGKGVSSGSTESAAVAKSLKEIWCTQCRNPGHAAQECAMNQKWCAICTTNT 299 ET Q+ G +SGST + +++ C +C+ GH A++C + +C C+ T Sbjct: 262 ETEVHTEQQKGDLPNSGSTPAGMATN--QKLVCLRCKEKGHLARDCHA-RIFCTNCSKPT 318
Query: 298 HNTLECYFN 272 H T +C ++ Sbjct: 319 HKTEDCLYD 327
>tr|Q9FH11|Q9FH11_ARATH Mutator-like transposase-like OS=Arabidopsis thaliana PE=4 SV=1 Length = 825
Score = 38.5 bits (88), Expect = 0.20 Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 7/70 (10%) Frame = -3
Query: 511 SGNNDSEKESK---ETPRKKSQRHGKGVSSGSTESAAVAKSLKEIWCTQCRNPGHAAQEC 341 +G EK K E+P+KK + GKGV + V+K + I C +C GH + C Sbjct: 724 TGTKKKEKRKKGKNESPKKKKK--GKGVQEPPEKRTKVSKEGRSIRCGRCSTEGHNTRSC 781
Query: 340 ----AMNQKW 323 +N++W Sbjct: 782 PSVGVVNKRW 791
>tr|A5E1K1|A5E1K1_LODEL Putative uncharacterized protein OS=Lodderomyces elongisporus GN=LELG_03488 PE=4 SV=1 Length = 329
Score = 37.7 bits (86), Expect = 0.34 Identities = 23/71 (32%), Positives = 31/71 (43%) Frame = -3
Query: 493 EKESKETPRKKSQRHGKGVSSGSTESAAVAKSLKEIWCTQCRNPGHAAQECAMNQKWCAI 314 + ++K T KKS +G GV + +S A K + C CR E +N K Sbjct: 42 QNQNKITKAKKSTANGSGVKDHTNDSTAPIKRRTKTGCFTCRKRKKKCDEDKVNGK---- 97
Query: 313 CTTNTHNTLEC 281 C T N LEC Sbjct: 98 CQACTRNFLEC 108
>tr|Q2UHU0|Q2UHU0_ASPOR Predicted protein OS=Aspergillus oryzae GN=AO090023000313 PE=4 SV=1 Length = 673
Score = 37.4 bits (85), Expect = 0.44 Identities = 20/82 (24%), Positives = 34/82 (41%), Gaps = 1/82 (1%) Frame = -3
Query: 514 DSGNNDSEKESKETPRKKSQRHGKGVSSGSTESAAVAKSLKEIWCTQCRNPGHAAQECAM 335 DS + E+ P H + T V + LK + T P A+ Sbjct: 591 DSTDEKFTPETSPAPESAQSNHEDSTTPQKTGRDVVLEGLKGVATTSSMAPVAGKASGAV 650
Query: 334 NQ-KWCAICTTNTHNTLECYFN 272 ++ KWCA+C + H +++C F+ Sbjct: 651 DESKWCALCERDGHESIDCPFD 672
>tr|B8N8D5|B8N8D5_ASPFL Noc1p protein, putative OS=Aspergillus flavus NRRL3357 GN=AFLA_107290 PE=4 SV=1 Length = 673
Score = 37.4 bits (85), Expect = 0.44 Identities = 20/82 (24%), Positives = 34/82 (41%), Gaps = 1/82 (1%) Frame = -3
Query: 514 DSGNNDSEKESKETPRKKSQRHGKGVSSGSTESAAVAKSLKEIWCTQCRNPGHAAQECAM 335 DS + E+ P H + T V + LK + T P A+ Sbjct: 591 DSTDEKFTPETSPAPESAQSNHEDSTTPQKTGRDVVLEGLKGVATTSSMAPVAGKASGAV 650
Query: 334 NQ-KWCAICTTNTHNTLECYFN 272 ++ KWCA+C + H +++C F+ Sbjct: 651 DESKWCALCERDGHESIDCPFD 672
>tr|Q6EIC6|Q6EIC6_HYAOR Putative zinc finger protein OS=Hyacinthus orientalis PE=2 SV=1 Length = 244
Score = 37.0 bits (84), Expect = 0.58 Identities = 14/34 (41%), Positives = 18/34 (52%) Frame = -3
Query: 382 CTQCRNPGHAAQECAMNQKWCAICTTNTHNTLEC 281 C CR PGH A+EC N C +C + H +C Sbjct: 147 CNNCRKPGHLARECT-NDPVCNVCNVSGHVARQC 179
Score = 33.5 bits (75), Expect = 6.4 Identities = 17/50 (34%), Positives = 23/50 (46%) Frame = -3
Query: 430 GSTESAAVAKSLKEIWCTQCRNPGHAAQECAMNQKWCAICTTNTHNTLEC 281 G + AK+L C C+ PGH A EC+ N+ C C H +C Sbjct: 71 GHIAAECTAKTL----CWNCKEPGHMANECS-NEAVCHNCNKTGHLARDC 115
>tr|Q677E2|Q677E2_HYAOR Ring zinc finger protein (Fragment) OS=Hyacinthus orientalis GN=HRZ1 PE=2 SV=1 Length = 196
Score = 37.0 bits (84), Expect = 0.58 Identities = 14/34 (41%), Positives = 18/34 (52%) Frame = -3
Query: 382 CTQCRNPGHAAQECAMNQKWCAICTTNTHNTLEC 281 C CR PGH A+EC N C +C + H +C Sbjct: 147 CNNCRKPGHLARECT-NDPVCNVCNVSGHVARQC 179
Score = 33.5 bits (75), Expect = 6.4 Identities = 17/50 (34%), Positives = 23/50 (46%) Frame = -3
Query: 430 GSTESAAVAKSLKEIWCTQCRNPGHAAQECAMNQKWCAICTTNTHNTLEC 281 G + AK+L C C+ PGH A EC+ N+ C C H +C Sbjct: 71 GHIAAECTAKTL----CWNCKEPGHMANECS-NEAVCHNCNKTGHLARDC 115
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