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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP917549
Clone id YMU001_000102_C06
Library
Length 547
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000102_C06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TCACATAAAGCTCTTGATTCATAAATAGTAAGTCTCATTTACAAACCCCCAGCCATAACT
AGTATTACATCATCATACTTCAAGTTCCAATCCCCTCTCTATAATATACAAGGATTTTCA
GCAAGCCCACCCGATGCAAGACAAAAGGTCAGCACACTAAGGAGCTAAACCCAGTATGTA
CATGCACAAAACACTTGAATACGTTTACTACAGATTCCCAATAAAGAGTGTCACATTTCC
CCTCATCATATAAAGCCAGCCATTTCATTTCAAAACTGGAAGTCCAGCACCTGCATAGGG
TGTAGCTGCTGAAGAGTCGGAATCGCACTTGCTCTCTCCTGATTTTACCAGAAATACACA
ATCGAAATCACACCATGTCCGGAAGTTGATACAACCCCACTGTTCCTTTCAATGCCAAGT
AGTACCGCACCCAAGTGAACTGCAGCAGATATGGCAGCAAAATCACCAACAACTCGTGAC
TCCTTTCGTAAAATGTGGGCTTCGGGAGTTGATGGGCATGTCCCCACCCTTAAAAGTTCA
GCGACAG
■■Homology search results ■■ -
sp_hit_id Q9HGL2
Definition sp|Q9HGL2|YHLA_SCHPO Uncharacterized calcium-binding protein C800.10c OS=Schizosaccharomyces pombe
Align length 46
Score (bit) 32.7
E-value 1.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917549|Adiantum capillus-veneris mRNA, clone:
YMU001_000102_C06.
         (547 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9HGL2|YHLA_SCHPO Uncharacterized calcium-binding protein C80...    33   1.2  
sp|O31809|YNDE_BACSU Spore germination protein yndE OS=Bacillus ...    32   2.0  
sp|P26371|KRA59_HUMAN Keratin-associated protein 5-9 OS=Homo sap...    31   4.5  
sp|Q6L8H1|KRA54_HUMAN Keratin-associated protein 5-4 OS=Homo sap...    30   7.7  

>sp|Q9HGL2|YHLA_SCHPO Uncharacterized calcium-binding protein
           C800.10c OS=Schizosaccharomyces pombe GN=SPBC800.10c
           PE=2 SV=1
          Length = 1116

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
 Frame = +1

Query: 364 EITPCPEVDTTPLFLSMPSS--TAPK*TAADMAAKSPTTRDSFRKM 495
           E  P PEVD+TP F S  S+  T  K T  D  +  PT  +SF  M
Sbjct: 708 EEAPKPEVDSTPRFPSFTSNGITTDKPTLPDTTSSVPTQHNSFDAM 753


>sp|O31809|YNDE_BACSU Spore germination protein yndE OS=Bacillus
           subtilis GN=yndE PE=1 SV=1
          Length = 363

 Score = 32.0 bits (71), Expect = 2.0
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = -1

Query: 517 AHQLPKPTFYERSHELLVILLPYLLQFTWVRYYLAL 410
           + Q PK TFYE S  ++   L +L+   ++ Y+LAL
Sbjct: 64  SQQYPKETFYEYSRHIVGKWLGHLISIVFITYFLAL 99


>sp|P26371|KRA59_HUMAN Keratin-associated protein 5-9 OS=Homo
           sapiens GN=KRTAP5-9 PE=2 SV=1
          Length = 169

 Score = 30.8 bits (68), Expect = 4.5
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -2

Query: 486 KGVTSCW*FCCHICCSSLGCGTT 418
           +G + C   CC  CCSS GCG++
Sbjct: 121 RGSSCCQSSCCKPCCSSSGCGSS 143


>sp|Q6L8H1|KRA54_HUMAN Keratin-associated protein 5-4 OS=Homo
           sapiens GN=KRTAP5-4 PE=2 SV=1
          Length = 288

 Score = 30.0 bits (66), Expect = 7.7
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -2

Query: 483 GVTSCW*FCCHICCSSLGCGTT 418
           G + C   CC  CCSS GCG++
Sbjct: 212 GSSCCQSSCCKPCCSSSGCGSS 233
tr_hit_id Q0DJX6
Definition tr|Q0DJX6|Q0DJX6_ORYSJ Os05g0215600 protein OS=Oryza sativa subsp. japonica
Align length 32
Score (bit) 39.3
E-value 0.016
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917549|Adiantum capillus-veneris mRNA, clone:
YMU001_000102_C06.
         (547 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q0DJX6|Q0DJX6_ORYSJ Os05g0215600 protein OS=Oryza sativa subs...    39   0.016
tr|A9THK3|A9THK3_PHYPA Predicted protein OS=Physcomitrella paten...    34   4.4  
tr|Q0C0F6|Q0C0F6_HYPNA Peptidase, family M28 OS=Hyphomonas neptu...    33   7.5  
tr|B8LEB0|B8LEB0_THAPS Predicted protein OS=Thalassiosira pseudo...    33   7.5  
tr|A5DGV4|A5DGV4_PICGU Predicted protein OS=Pichia guilliermondi...    33   7.6  
tr|B7S2E4|B7S2E4_9GAMM Putative uncharacterized protein OS=marin...    33   9.9  

>tr|Q0DJX6|Q0DJX6_ORYSJ Os05g0215600 protein OS=Oryza sativa subsp.
           japonica GN=Os05g0215600 PE=2 SV=1
          Length = 300

 Score = 39.3 bits (90), Expect(2) = 0.016
 Identities = 16/32 (50%), Positives = 23/32 (71%)
 Frame = -1

Query: 505 PKPTFYERSHELLVILLPYLLQFTWVRYYLAL 410
           PKPT++E S   L+ LLP+  + TW+R YL+L
Sbjct: 259 PKPTYFETSSLQLISLLPFWFKLTWMRCYLSL 290



 Score = 21.9 bits (45), Expect(2) = 0.016
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -3

Query: 545 VAELLRVGTCPSTPE 501
           V EL+R   CPSTP+
Sbjct: 246 VVELIRSLGCPSTPK 260


>tr|A9THK3|A9THK3_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_145732 PE=4 SV=1
          Length = 235

 Score = 34.3 bits (77), Expect = 4.4
 Identities = 14/36 (38%), Positives = 23/36 (63%)
 Frame = -1

Query: 505 PKPTFYERSHELLVILLPYLLQFTWVRYYLALKGTV 398
           P PT+Y +     + +  Y+ QFTW+R+Y AL+ T+
Sbjct: 186 PTPTYYHQ-----IGVFSYVQQFTWIRFYSALRNTL 216


>tr|Q0C0F6|Q0C0F6_HYPNA Peptidase, family M28 OS=Hyphomonas
           neptunium (strain ATCC 15444) GN=HNE_2090 PE=4 SV=1
          Length = 578

 Score = 33.5 bits (75), Expect = 7.5
 Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
 Frame = +1

Query: 325 ALALS*FYQKYTIEITPCPEVDTTP---LFLSMPSSTAPK*TAADMAAKSPTTRD 480
           ALAL+        E  P PE    P   L L +P +TAP+ TAAD+  +  T  D
Sbjct: 12  ALALAACSPSAPTEPAPAPEAPAAPAEELLLPLPDATAPEITAADIGVRVKTLAD 66


>tr|B8LEB0|B8LEB0_THAPS Predicted protein OS=Thalassiosira
           pseudonana CCMP1335 GN=THAPSDRAFT_bd787 PE=4 SV=1
          Length = 224

 Score = 33.5 bits (75), Expect = 7.5
 Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
 Frame = -1

Query: 346 KIRREQVRFRLF-SSYTLCRC-WTSSFEMKWLALYDEGKCDTLYWESVV 206
           K+ +    F +F +S+TLCR  W   F     A++ +GK D L W SV+
Sbjct: 140 KLNKNYTNFLIFFTSFTLCRILWVPYFIYNTYAIHLQGKIDYLIWPSVL 188


>tr|A5DGV4|A5DGV4_PICGU Predicted protein OS=Pichia guilliermondii
           GN=PGUG_02505 PE=4 SV=2
          Length = 389

 Score = 33.5 bits (75), Expect = 7.6
 Identities = 16/30 (53%), Positives = 22/30 (73%)
 Frame = +3

Query: 228 VSHFPSSYKASHFISKLEVQHLHRV*LLKS 317
           V+ F S YKAS F+SK  + HL+R+ L+KS
Sbjct: 344 VNKFSSKYKASKFVSKRRIAHLYRI-LIKS 372


>tr|B7S2E4|B7S2E4_9GAMM Putative uncharacterized protein OS=marine
           gamma proteobacterium HTCC2148 GN=GPB2148_324 PE=4 SV=1
          Length = 353

 Score = 33.1 bits (74), Expect = 9.9
 Identities = 13/28 (46%), Positives = 20/28 (71%)
 Frame = -3

Query: 437 HLGAVLLGIERNSGVVSTSGHGVISIVY 354
           H  ++  G+ERN G+V+T+ HGV +I Y
Sbjct: 297 HPESIAAGLERNPGIVATANHGVSAIPY 324