BP917550 |
Clone id |
YMU001_000102_C07 |
Library |
YMU01 |
Length |
431 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000102_C07. |
Accession |
BP917550 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1576Contig1 |
Sequence |
GCCACAAATGGTGAGAGGAGCTCACCCATACCCTGGCAATATCCAGTCTCTGGATCAAAA AGAGCATACACCTCCAGTATAGAAACTAACCTCGCAGCATGATGCTGCAAACAAGGTTCT AGATCTAAATCCTCCTTAAGGCCAACATCCAACGCGAGCTGAGTTGCAGCTCCCTTTGTT ACACTGGCCTGAGAGGGTGAGTGTGCAACCCATTCGGCATTCATGCGAATGGCATCCAAT CTCATGATCCGCTGCCACATCGTAAACTCTTTCTTAGCCTGCACACTCATTTCTTCCCAT TTTGCAAGCTTGTCTTGCTCCATTGGGCTGTTCAAACTTTTGTCTGCACATTCTCTATGC TCTAGCAACAATGAACCATCTGTAGGGATCAGTGCAGGCAGAGACACATCAAAAACGTGC TGACTGTCTGG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q755I4 |
Definition |
sp|Q755I4|GYP5_ASHGO GTPase-activating protein GYP5 OS=Ashbya gossypii |
Align length |
29 |
Score (bit) |
36.2 |
E-value |
0.058 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LR92 |
Definition |
tr|B8LR92|B8LR92_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
142 |
Score (bit) |
132.0 |
E-value |
9.0e-30 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917550|Adiantum capillus-veneris mRNA, clone: YMU001_000102_C07. (431 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LR92|B8LR92_PICSI Putative uncharacterized protein OS=Picea... 132 9e-30 tr|A9NVH9|A9NVH9_PICSI Putative uncharacterized protein OS=Picea... 132 9e-30 tr|A9TX53|A9TX53_PHYPA Predicted protein (Fragment) OS=Physcomit... 117 2e-25 tr|A7QJ65|A7QJ65_VITVI Chromosome chr2 scaffold_105, whole genom... 116 5e-25 tr|A9RYK1|A9RYK1_PHYPA Predicted protein (Fragment) OS=Physcomit... 115 1e-24 tr|A5ADA4|A5ADA4_VITVI Putative uncharacterized protein OS=Vitis... 114 2e-24 tr|Q9FHY9|Q9FHY9_ARATH GTPase activator protein of Rab-like smal... 113 5e-24 tr|Q67YN2|Q67YN2_ARATH GTPase activator protein of Rab-like smal... 113 5e-24 tr|A7QEY2|A7QEY2_VITVI Chromosome chr16 scaffold_86, whole genom... 113 5e-24 tr|Q9FJC7|Q9FJC7_ARATH GTPase activator protein of Rab-like smal... 111 2e-23 tr|Q94BY9|Q94BY9_ARATH AT5g53570/MNC6_11 OS=Arabidopsis thaliana... 111 2e-23 tr|Q56WX5|Q56WX5_ARATH GTPase activator protein of Rab-like smal... 111 2e-23 tr|B4FIM1|B4FIM1_MAIZE Putative uncharacterized protein OS=Zea m... 110 3e-23 tr|Q6Z9D7|Q6Z9D7_ORYSJ Os08g0547200 protein OS=Oryza sativa subs... 107 3e-22 tr|Q69NG6|Q69NG6_ORYSJ Os09g0528800 protein OS=Oryza sativa subs... 107 3e-22 tr|B8B9D2|B8B9D2_ORYSI Putative uncharacterized protein OS=Oryza... 107 3e-22 tr|A3BVG7|A3BVG7_ORYSJ Putative uncharacterized protein OS=Oryza... 107 3e-22 tr|Q94HX6|Q94HX6_ORYSA Putative GTPase activating protein OS=Ory... 106 5e-22 tr|Q7XCR7|Q7XCR7_ORYSJ Os10g0518100 protein OS=Oryza sativa subs... 106 5e-22 tr|B8BHW1|B8BHW1_ORYSI Putative uncharacterized protein OS=Oryza... 106 5e-22 tr|A3C6I1|A3C6I1_ORYSJ Putative uncharacterized protein OS=Oryza... 106 5e-22 tr|Q9FIN3|Q9FIN3_ARATH GTPase activator-like protein of Rab-like... 104 3e-21 tr|Q67XX9|Q67XX9_ARATH GTPase activator like protein of Rab-like... 104 3e-21 tr|Q0WLJ6|Q0WLJ6_ARATH GTPase activator-like protein of Rab-like... 104 3e-21 tr|Q9SG14|Q9SG14_ARATH Putative GTPase activator protein of Rab-... 103 3e-21 tr|Q4V3B4|Q4V3B4_ARATH At3g49350 (GTPase activating-like protein... 103 3e-21 tr|A3C0V1|A3C0V1_ORYSJ Putative uncharacterized protein OS=Oryza... 96 9e-19 tr|A2Z3C3|A2Z3C3_ORYSI Putative uncharacterized protein OS=Oryza... 96 9e-19 tr|B4FE62|B4FE62_MAIZE Putative uncharacterized protein OS=Zea m... 58 3e-07 tr|A9TWF8|A9TWF8_PHYPA Predicted protein (Fragment) OS=Physcomit... 50 6e-05
>tr|B8LR92|B8LR92_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 455
Score = 132 bits (332), Expect = 9e-30 Identities = 67/142 (47%), Positives = 97/142 (68%) Frame = -1
Query: 428 DSQHVFDVSLPALIPTDGSLLLEHRECADKSLNSPMEQDKLAKWEEMSVQAKKEFTMWQR 249 D ++F V + DG + + + KS ++ ++ D++ +E +A ++F+ WQR Sbjct: 141 DEYNLFPVKSSVTV-NDGQTVNDGQTQDRKSSDNEVKFDRIESLKERGPKALEDFSTWQR 199
Query: 248 IMRLDAIRMNAEWVAHSPSQASVTKGAATQLALDVGLKEDLDLEPCLQHHAARLVSILEV 69 I+RLDA+RMNAEW+ +SPSQA+V++ A+ L VGLK D LEP +HHAARLV+ILE Sbjct: 200 IIRLDAVRMNAEWIPYSPSQANVSEEEASVLGCHVGLKNDEHLEPSRKHHAARLVAILET 259
Query: 68 YALFDPETGYCQGMGELLSPFV 3 YAL+D + GYCQGM +LLSPFV Sbjct: 260 YALYDYDIGYCQGMSDLLSPFV 281
>tr|A9NVH9|A9NVH9_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 585
Score = 132 bits (332), Expect = 9e-30 Identities = 67/142 (47%), Positives = 97/142 (68%) Frame = -1
Query: 428 DSQHVFDVSLPALIPTDGSLLLEHRECADKSLNSPMEQDKLAKWEEMSVQAKKEFTMWQR 249 D ++F V + DG + + + KS ++ ++ D++ +E +A ++F+ WQR Sbjct: 271 DEYNLFPVKSSVTV-NDGQTVNDGQTQDRKSSDNEVKFDRIESLKERGPKALEDFSTWQR 329
Query: 248 IMRLDAIRMNAEWVAHSPSQASVTKGAATQLALDVGLKEDLDLEPCLQHHAARLVSILEV 69 I+RLDA+RMNAEW+ +SPSQA+V++ A+ L VGLK D LEP +HHAARLV+ILE Sbjct: 330 IIRLDAVRMNAEWIPYSPSQANVSEEEASVLGCHVGLKNDEHLEPSRKHHAARLVAILET 389
Query: 68 YALFDPETGYCQGMGELLSPFV 3 YAL+D + GYCQGM +LLSPFV Sbjct: 390 YALYDYDIGYCQGMSDLLSPFV 411
>tr|A9TX53|A9TX53_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_31780 PE=4 SV=1 Length = 367
Score = 117 bits (294), Expect = 2e-25 Identities = 52/91 (57%), Positives = 72/91 (79%) Frame = -1
Query: 275 KKEFTMWQRIMRLDAIRMNAEWVAHSPSQASVTKGAATQLALDVGLKEDLDLEPCLQHHA 96 ++ F W+RI++LDA+RMNAEW+ ++ +QASVT A +L+ + GL +D LEP ++HHA Sbjct: 111 EENFQTWRRIIKLDAVRMNAEWIPYAATQASVTSQEAERLSKEAGLMDDEHLEPPMRHHA 170
Query: 95 ARLVSILEVYALFDPETGYCQGMGELLSPFV 3 AR+V ILE Y ++DPETGYCQGM +LLSPFV Sbjct: 171 ARVVLILEAYTMYDPETGYCQGMSDLLSPFV 201
>tr|A7QJ65|A7QJ65_VITVI Chromosome chr2 scaffold_105, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00000523001 PE=4 SV=1 Length = 553
Score = 116 bits (291), Expect = 5e-25 Identities = 59/113 (52%), Positives = 79/113 (69%) Frame = -1
Query: 341 KSLNSPMEQDKLAKWEEMSVQAKKEFTMWQRIMRLDAIRMNAEWVAHSPSQASVTKGAAT 162 K +SP E + +K ++ ++F WQRI+RLDA+R NAEW+ +SPSQA+V++ A Sbjct: 272 KENSSPSETESGSK-----LRMNEDFATWQRIIRLDAVRANAEWIIYSPSQAAVSEIKAR 326
Query: 161 QLALDVGLKEDLDLEPCLQHHAARLVSILEVYALFDPETGYCQGMGELLSPFV 3 + A VGLK+ LEPC HAARLV+ILE YAL+D E GYCQGM +LLSP + Sbjct: 327 RFAESVGLKDYDHLEPCRIFHAARLVAILEAYALYDSEIGYCQGMSDLLSPII 379
>tr|A9RYK1|A9RYK1_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_121602 PE=4 SV=1 Length = 274
Score = 115 bits (288), Expect = 1e-24 Identities = 53/91 (58%), Positives = 71/91 (78%) Frame = -1
Query: 275 KKEFTMWQRIMRLDAIRMNAEWVAHSPSQASVTKGAATQLALDVGLKEDLDLEPCLQHHA 96 +++F WQRI+RLDA+RMNAEW+ ++ +QA VT A +L+ GL++D LEP +HHA Sbjct: 6 EEDFQTWQRIIRLDAVRMNAEWIPYAETQAHVTFEEAARLSKVAGLQDDEHLEPPRRHHA 65
Query: 95 ARLVSILEVYALFDPETGYCQGMGELLSPFV 3 ARLV ILE Y ++DP+TGYCQGM +LLSPFV Sbjct: 66 ARLVLILEAYTIYDPKTGYCQGMSDLLSPFV 96
>tr|A5ADA4|A5ADA4_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_025995 PE=4 SV=1 Length = 266
Score = 114 bits (285), Expect = 2e-24 Identities = 54/90 (60%), Positives = 69/90 (76%) Frame = -1
Query: 272 KEFTMWQRIMRLDAIRMNAEWVAHSPSQASVTKGAATQLALDVGLKEDLDLEPCLQHHAA 93 ++F WQRI+RLDA+R NAEW+ +SPSQA+V++ A + A VGLK+ LEPC HAA Sbjct: 3 EDFATWQRIIRLDAVRANAEWIIYSPSQAAVSEIKARRFAESVGLKDYDHLEPCRIFHAA 62
Query: 92 RLVSILEVYALFDPETGYCQGMGELLSPFV 3 RLV+ILE YAL+D E GYCQGM +LLSP + Sbjct: 63 RLVAILEAYALYDSEIGYCQGMSDLLSPII 92
>tr|Q9FHY9|Q9FHY9_ARATH GTPase activator protein of Rab-like small GTPases-like protein OS=Arabidopsis thaliana PE=4 SV=1 Length = 506
Score = 113 bits (282), Expect = 5e-24 Identities = 58/115 (50%), Positives = 79/115 (68%), Gaps = 1/115 (0%) Frame = -1
Query: 344 DKSLNSPMEQDKLAKWEEMSVQAKKEF-TMWQRIMRLDAIRMNAEWVAHSPSQASVTKGA 168 +K ++SP + K S A ++F + WQRI+RLDA+R N EWV +SP+QA+V++ Sbjct: 225 EKEISSPSSKPK-------SQAADEDFMSTWQRIIRLDAVRANDEWVPYSPTQAAVSETK 277
Query: 167 ATQLALDVGLKEDLDLEPCLQHHAARLVSILEVYALFDPETGYCQGMGELLSPFV 3 A +A+ VGL + LEPC HAARLV ILE YA++DPE GYCQGM +LLSP + Sbjct: 278 ARGIAIQVGLNDYDHLEPCRIFHAARLVGILEAYAVYDPEIGYCQGMSDLLSPLI 332
>tr|Q67YN2|Q67YN2_ARATH GTPase activator protein of Rab-like small GTPases-like protein OS=Arabidopsis thaliana GN=At5g41940 PE=2 SV=1 Length = 549
Score = 113 bits (282), Expect = 5e-24 Identities = 58/115 (50%), Positives = 79/115 (68%), Gaps = 1/115 (0%) Frame = -1
Query: 344 DKSLNSPMEQDKLAKWEEMSVQAKKEF-TMWQRIMRLDAIRMNAEWVAHSPSQASVTKGA 168 +K ++SP + K S A ++F + WQRI+RLDA+R N EWV +SP+QA+V++ Sbjct: 268 EKEISSPSSKPK-------SQAADEDFMSTWQRIIRLDAVRANDEWVPYSPTQAAVSETK 320
Query: 167 ATQLALDVGLKEDLDLEPCLQHHAARLVSILEVYALFDPETGYCQGMGELLSPFV 3 A +A+ VGL + LEPC HAARLV ILE YA++DPE GYCQGM +LLSP + Sbjct: 321 ARGIAIQVGLNDYDHLEPCRIFHAARLVGILEAYAVYDPEIGYCQGMSDLLSPLI 375
>tr|A7QEY2|A7QEY2_VITVI Chromosome chr16 scaffold_86, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00037201001 PE=4 SV=1 Length = 513
Score = 113 bits (282), Expect = 5e-24 Identities = 57/118 (48%), Positives = 80/118 (67%), Gaps = 1/118 (0%) Frame = -1
Query: 353 ECADKSLNSPMEQDKLAKWEEMS-VQAKKEFTMWQRIMRLDAIRMNAEWVAHSPSQASVT 177 E +D + + +K E S ++ ++F WQRI+R+DA+R N+EW+ +SP+QA+V+ Sbjct: 218 ESSDSDSSEDPDDSSPSKTEVHSKIRTAEDFATWQRIIRVDAVRANSEWIPYSPAQAAVS 277
Query: 176 KGAATQLALDVGLKEDLDLEPCLQHHAARLVSILEVYALFDPETGYCQGMGELLSPFV 3 +G A A VGLK+ LEP HAARLV+ILE YAL+DPE GYCQGM +LLSP + Sbjct: 278 EGRARCSAEAVGLKDYDHLEPSRIFHAARLVAILEAYALYDPEIGYCQGMSDLLSPII 335
>tr|Q9FJC7|Q9FJC7_ARATH GTPase activator protein of Rab-like small GTPases-like protein OS=Arabidopsis thaliana PE=4 SV=1 Length = 524
Score = 111 bits (278), Expect = 2e-23 Identities = 56/118 (47%), Positives = 78/118 (66%), Gaps = 4/118 (3%) Frame = -1
Query: 344 DKSLNSPMEQDKL----AKWEEMSVQAKKEFTMWQRIMRLDAIRMNAEWVAHSPSQASVT 177 D S N+ E L A ++ V ++F+ WQRI+RLDA+R ++EW +SP ++T Sbjct: 225 DNSNNNSEENSSLLVAAASEVQVEVAVHEDFSTWQRIIRLDALRADSEWANYSPYSTAIT 284
Query: 176 KGAATQLALDVGLKEDLDLEPCLQHHAARLVSILEVYALFDPETGYCQGMGELLSPFV 3 + A +LA VGLK+ LE C +HAARLV+ILE YA++DPE GYCQGM +LLSP + Sbjct: 285 ESKARRLAESVGLKDYDHLESCRLYHAARLVAILEAYAMYDPEIGYCQGMSDLLSPIL 342
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