BP917551
Clone id YMU001_000102_C08
Library
Length 177
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000102_C08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GATCTGTCAAAGACAGCTTTCTCAACTTAGGAATGTCTGGTCGACAGTAGCTATATTGCG
GCAACAAAGGCAAGCAAAATTAGGACATCCTGGACCTGCCAATTTGGACCCCTCCTAGGC
TCAATACGCAGGATCGTCATTGGCAGGTGCAGACTTCTTGGATTGTGGGTTACCCTC
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917551|Adiantum capillus-veneris mRNA, clone:
YMU001_000102_C08.
(177 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id B7VPB8
Definition tr|B7VPB8|B7VPB8_VIBSP Permease OS=Vibrio splendidus LGP32
Align length 47
Score (bit) 32.7
E-value 9.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917551|Adiantum capillus-veneris mRNA, clone:
YMU001_000102_C08.
(177 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B7VPB8|B7VPB8_VIBSP Permease OS=Vibrio splendidus LGP32 GN=VS... 33 9.5

>tr|B7VPB8|B7VPB8_VIBSP Permease OS=Vibrio splendidus LGP32
GN=VS_1683 PE=4 SV=1
Length = 399

Score = 32.7 bits (73), Expect = 9.5
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +1

Query: 37 LVDSSYIAATKASKIRTSWTCQFGPLLGSIRRIVIGRC-RLLGLWVT 174
L+ Y+A T +SK+ WT +F PL G I+IG C L+G+ V+
Sbjct: 254 LIFLCYLAGTVSSKLSNKWTLRFDPLNG----ILIGVCISLIGMLVS 296