BP917552
Clone id YMU001_000102_C09
Library
Length 432
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000102_C09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
ATTACGAGAGATCTTGGAATGTCCTTTGCCTGGTGTAATTCCGGTGATCAACTATGAAAA
CTCATTTGATGTGCATGTGTTTGTCCTTATCTAAAGTTGAGCTCCATTGAAGTTTATGGG
GATTGGGTAGTCAAAAGTTTTAGGTTCTTGCACGTGTGTTCAAAGGGGTTCTCAAAAGCA
TTGTAACTTGGGTAGCCATGGCTTTCTCTTATCCGGAGTTTCATGGAAGAAGTGATGAAG
ATGTGGAAGATTTTTTGGAAAAGATGGAGGTTGCCTGCATTAGCAACCAGATTCATGACC
CTGCGCAGATGTTACGTCTTCTCCAAATTTGTTTGAAGAATGATGCACGAGTCTGGTCCA
AAACATTTGAAGAGGAGTTGCGTGCAGTGGATCCACCTGTAAGATTGAGTTGGGACAATC
TAAGGCATGGGT
■■Homology search results ■■ -
sp_hit_id Q8BLA1
Definition sp|Q8BLA1|DLEC1_MOUSE Deleted in lung and esophageal cancer protein 1 homolog OS=Mus musculus
Align length 91
Score (bit) 33.9
E-value 0.29
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917552|Adiantum capillus-veneris mRNA, clone:
YMU001_000102_C09.
(432 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8BLA1|DLEC1_MOUSE Deleted in lung and esophageal cancer prot... 34 0.29
sp|P07548|DFD_DROME Homeotic protein deformed OS=Drosophila mela... 31 1.9
sp|Q12766|SMF_HUMAN Protein SMF OS=Homo sapiens GN=SMF PE=2 SV=2 30 4.2
sp|Q6FIK6|LIP1_CANGA Ceramide synthase subunit LIP1 OS=Candida g... 30 5.5
sp|Q4ZHS0|GCYA3_CANFA Guanylate cyclase soluble subunit alpha-3 ... 30 5.6
sp|Q9LF53|RGL3_ARATH DELLA protein RGL3 OS=Arabidopsis thaliana ... 29 7.1
sp|Q9ERL9|GCYA3_MOUSE Guanylate cyclase soluble subunit alpha-3 ... 29 7.3
sp|Q8N1V2|WDR16_HUMAN WD repeat-containing protein 16 OS=Homo sa... 29 9.3

>sp|Q8BLA1|DLEC1_MOUSE Deleted in lung and esophageal cancer protein
1 homolog OS=Mus musculus GN=Dlec1 PE=2 SV=1
Length = 635

Score = 33.9 bits (76), Expect = 0.29
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Frame = +3

Query: 144 VLARVFKGVLKSIVTWVAMAFSYPEFHGRSDEDVEDFLEKMEVA-CISNQIHDPAQML-- 314
+LARVF+ + + V ++ S + G D E+FL++++ A I Q D A ML
Sbjct: 95 LLARVFRNLYTAQVIGDDLSDSLIKARGSEDARHEEFLDQLQQARAIYKQRLDEAAMLER 154

Query: 315 RLLQICLKNDARVWSKTFEEELRAVDPPVRL 407
++Q ++ A T + L+ V+ PV+L
Sbjct: 155 HIMQARARDIAETEHTTKQSRLQVVETPVKL 185


>sp|P07548|DFD_DROME Homeotic protein deformed OS=Drosophila
melanogaster GN=Dfd PE=1 SV=2
Length = 586

Score = 31.2 bits (69), Expect = 1.9
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 8/55 (14%)
Frame = -1

Query: 351 LVHHSSNKF--GEDVTSAQGHESGC*CRQPPSFPKNLPHLH------HFFHETPD 211
L HH SN G SA G+ S PPS P + PH H ++ H P+
Sbjct: 107 LPHHHSNSAISGHHQASAGGYSSNYANATPPSHPHSHPHAHPHQSLGYYVHHAPE 161


>sp|Q12766|SMF_HUMAN Protein SMF OS=Homo sapiens GN=SMF PE=2 SV=2
Length = 1538

Score = 30.0 bits (66), Expect = 4.2
Identities = 15/46 (32%), Positives = 28/46 (60%)
Frame = +3

Query: 174 KSIVTWVAMAFSYPEFHGRSDEDVEDFLEKMEVACISNQIHDPAQM 311
++++ ++ F++PEF G ++ +VEDF ME I Q+ PA +
Sbjct: 1147 ENVLALKSVEFTWPEFLGSNEVNVEDFWATMETEVI-EQVAFPASI 1191


>sp|Q6FIK6|LIP1_CANGA Ceramide synthase subunit LIP1 OS=Candida
glabrata GN=LIP1 PE=3 SV=1
Length = 144

Score = 29.6 bits (65), Expect = 5.5
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -2

Query: 404 SYRWIHCTQLLFKCFGPDSCII 339
+Y W HCT ++ + GPDS ++
Sbjct: 38 NYEWFHCTPVMERVGGPDSSVL 59


>sp|Q4ZHS0|GCYA3_CANFA Guanylate cyclase soluble subunit alpha-3
OS=Canis familiaris GN=GUCY1A3 PE=2 SV=1
Length = 690

Score = 29.6 bits (65), Expect = 5.6
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Frame = -1

Query: 270 PPSFPKNLPHLHHFF--HETPDKRKPWLPK 187
PP+FP +P + HF +E KPW K
Sbjct: 643 PPNFPSEIPGICHFLEAYEPATNSKPWFQK 672


>sp|Q9LF53|RGL3_ARATH DELLA protein RGL3 OS=Arabidopsis thaliana
GN=RGL3 PE=1 SV=1
Length = 523

Score = 29.3 bits (64), Expect = 7.1
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +3

Query: 225 GRSDEDVEDFLEKMEVACISNQIHDPAQMLRLLQICLKNDARVWSKTFEE 374
G D+++++FL + S+ + D AQ L L++ L ND S F +
Sbjct: 27 GGGDDNMDEFLAVLGYKVRSSDMADVAQKLEQLEMVLSNDIASSSNAFND 76


>sp|Q9ERL9|GCYA3_MOUSE Guanylate cyclase soluble subunit alpha-3
OS=Mus musculus GN=Gucy1a3 PE=2 SV=1
Length = 691

Score = 29.3 bits (64), Expect = 7.3
Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 3/28 (10%)
Frame = -1

Query: 270 PPSFPKNLPHLHHF---FHETPDKRKPW 196
PP+FP ++P + HF +H KPW
Sbjct: 643 PPNFPSDIPGICHFLDAYHHQGPNSKPW 670


>sp|Q8N1V2|WDR16_HUMAN WD repeat-containing protein 16 OS=Homo
sapiens GN=WDR16 PE=1 SV=3
Length = 620

Score = 28.9 bits (63), Expect = 9.3
Identities = 16/53 (30%), Positives = 21/53 (39%), Gaps = 3/53 (5%)
Frame = +3

Query: 249 DFLEKMEVACISNQIHD---PAQMLRLLQICLKNDARVWSKTFEEELRAVDPP 398
DF E + C + + D P L C K D RVW + EL + P
Sbjct: 321 DFKETLIATCHFDAVEDIVFPFGTAELFATCAKKDIRVWHTSSNRELLRITVP 373


tr_hit_id Q9SKF2
Definition tr|Q9SKF2|Q9SKF2_ARATH Putative Athila retroelement ORF1 protein OS=Arabidopsis thaliana
Align length 73
Score (bit) 38.1
E-value 0.22
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917552|Adiantum capillus-veneris mRNA, clone:
YMU001_000102_C09.
(432 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q9SKF2|Q9SKF2_ARATH Putative Athila retroelement ORF1 protein... 38 0.22
tr|Q9SKF3|Q9SKF3_ARATH Putative Athila retroelement ORF1 protein... 37 0.65
tr|Q4V821|Q4V821_XENLA MGC114828 protein OS=Xenopus laevis GN=wd... 36 1.1
tr|Q6IP46|Q6IP46_XENLA MGC78960 protein OS=Xenopus laevis GN=MGC... 35 1.9
tr|Q32NV2|Q32NV2_XENLA MGC78960 protein OS=Xenopus laevis GN=MGC... 35 1.9
tr|A8WH02|A8WH02_XENTR LOC100127736 protein OS=Xenopus tropicali... 35 1.9
tr|A5C7E6|A5C7E6_VITVI Putative uncharacterized protein OS=Vitis... 33 5.5
tr|Q9XX50|Q9XX50_CAEEL Protein Y38H6C.9, partially confirmed by ... 33 7.1
tr|A5H2Q7|A5H2Q7_LODEL Putative uncharacterized protein OS=Lodde... 33 7.1
tr|A5H2P5|A5H2P5_LODEL Putative uncharacterized protein OS=Lodde... 33 7.1
tr|Q2AA33|Q2AA33_ASPOF Retrotransposon gag protein OS=Asparagus ... 33 9.3

>tr|Q9SKF2|Q9SKF2_ARATH Putative Athila retroelement ORF1 protein
OS=Arabidopsis thaliana GN=At2g13260 PE=4 SV=1
Length = 622

Score = 38.1 bits (87), Expect = 0.22
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Frame = +3

Query: 216 EFHGRSDEDVEDFLEKMEVACIS---NQIHDPAQMLRLLQICLKNDARVWSKTFEEELRA 386
+FHG S ED D LE+ ++ C + N I + A LRL L + AR+W K + R+
Sbjct: 71 KFHGLSMEDPLDHLEQFDMLCSTVKINGISEDAFKLRLFPFSLGDRARIWEKNLPQ--RS 128

Query: 387 VDPPVRLSWDNLR 425
+ SWD +
Sbjct: 129 I-----TSWDQCK 136


>tr|Q9SKF3|Q9SKF3_ARATH Putative Athila retroelement ORF1 protein
OS=Arabidopsis thaliana GN=At2g13250 PE=2 SV=1
Length = 507

Score = 36.6 bits (83), Expect = 0.65
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +3

Query: 216 EFHGRSDEDVEDFLEKMEVACIS---NQIHDPAQMLRLLQICLKNDARVWSKTFEE 374
+FHG S ED D L++ ++ C + N I + A LRL L + AR+W K +
Sbjct: 144 KFHGLSMEDPLDHLDQFDMLCSTVKINGISEDAFKLRLFPFSLGDRARIWEKNLPQ 199


>tr|Q4V821|Q4V821_XENLA MGC114828 protein OS=Xenopus laevis GN=wdr16
PE=2 SV=1
Length = 617

Score = 35.8 bits (81), Expect = 1.1
Identities = 24/68 (35%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
Frame = +3

Query: 204 FSYPEFHGRSDEDVEDFLEKMEVACISNQIHD---PAQMLRLLQICLKNDARVWSKTFEE 374
F+YPEF E++ C S I+D P L C KND RVW T +
Sbjct: 313 FNYPEFK-----------EELITTCHSEAINDITFPFGTSELFATCSKNDIRVWHTTTHK 361

Query: 375 ELRAVDPP 398
EL V P
Sbjct: 362 ELLRVTVP 369


>tr|Q6IP46|Q6IP46_XENLA MGC78960 protein OS=Xenopus laevis
GN=MGC78960 PE=2 SV=1
Length = 619

Score = 35.0 bits (79), Expect = 1.9
Identities = 26/81 (32%), Positives = 35/81 (43%), Gaps = 5/81 (6%)
Frame = +3

Query: 204 FSYPEFHGRSDEDVEDFLEKMEVACISNQIHD---PAQMLRLLQICLKNDARVWSKTFEE 374
F+YPEF E++ C S I+D P L C KND RVW T +
Sbjct: 315 FNYPEFK-----------EELITTCHSEAINDITFPFGTSELFATCSKNDIRVWHTTTHK 363

Query: 375 ELRAVDPP--VRLSWDNLRHG 431
E+ + P L+ D +R G
Sbjct: 364 EMLRITVPNMTCLAIDFMRDG 384


>tr|Q32NV2|Q32NV2_XENLA MGC78960 protein OS=Xenopus laevis
GN=MGC78960 PE=2 SV=1
Length = 619

Score = 35.0 bits (79), Expect = 1.9
Identities = 26/81 (32%), Positives = 35/81 (43%), Gaps = 5/81 (6%)
Frame = +3

Query: 204 FSYPEFHGRSDEDVEDFLEKMEVACISNQIHD---PAQMLRLLQICLKNDARVWSKTFEE 374
F+YPEF E++ C S I+D P L C KND RVW T +
Sbjct: 315 FNYPEFK-----------EELITTCHSEAINDITFPFGTSELFATCSKNDIRVWHTTTHK 363

Query: 375 ELRAVDPP--VRLSWDNLRHG 431
E+ + P L+ D +R G
Sbjct: 364 EMLRITVPNMTCLAIDFMRDG 384


>tr|A8WH02|A8WH02_XENTR LOC100127736 protein OS=Xenopus tropicalis
GN=wdr16 PE=2 SV=1
Length = 617

Score = 35.0 bits (79), Expect = 1.9
Identities = 27/81 (33%), Positives = 34/81 (41%), Gaps = 5/81 (6%)
Frame = +3

Query: 204 FSYPEFHGRSDEDVEDFLEKMEVACISNQIHD---PAQMLRLLQICLKNDARVWSKTFEE 374
FSYPEF E++ C S I+D P L C KND RVW +
Sbjct: 313 FSYPEFK-----------EELIATCHSEAINDIAFPFGTSELFATCSKNDIRVWHTATHK 361

Query: 375 ELRAVDPP--VRLSWDNLRHG 431
EL + P L+ D +R G
Sbjct: 362 ELLRITVPNMTCLAIDFMRDG 382


>tr|A5C7E6|A5C7E6_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_007470 PE=4 SV=1
Length = 516

Score = 33.5 bits (75), Expect = 5.5
Identities = 17/71 (23%), Positives = 31/71 (43%)
Frame = +3

Query: 213 PEFHGRSDEDVEDFLEKMEVACISNQIHDPAQMLRLLQICLKNDARVWSKTFEEELRAVD 392
P F G SDE L + C +N + ++R+ + L +A +W ++
Sbjct: 243 PIFRGSSDECPVTHLSRFTKVCRANNVSSVEMIMRIFPVTLDGEAALWYDL------NIE 296

Query: 393 PPVRLSWDNLR 425
P LSW+ ++
Sbjct: 297 PYSSLSWEEIK 307


>tr|Q9XX50|Q9XX50_CAEEL Protein Y38H6C.9, partially confirmed by
transcript evidence OS=Caenorhabditis elegans
GN=Y38H6C.9 PE=2 SV=1
Length = 282

Score = 33.1 bits (74), Expect = 7.1
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Frame = +3

Query: 246 EDFLEKMEVACISNQIHDPAQMLRLLQIC--LKNDARVWSKTFEEELRAVDPPVRLSWDN 419
E +LEK+ V C++ I + L ++C +K +ARV S E++L D ++++D
Sbjct: 113 EGYLEKIYVDCVTGAIFEKLVELEQFKMCKYIKLEARVLS---EQQLLKFDSSFKVNYDF 169

Query: 420 LRH 428
L+H
Sbjct: 170 LQH 172


>tr|A5H2Q7|A5H2Q7_LODEL Putative uncharacterized protein
OS=Lodderomyces elongisporus GN=LELG_05772 PE=3 SV=1
Length = 565

Score = 33.1 bits (74), Expect = 7.1
Identities = 14/52 (26%), Positives = 31/52 (59%)
Frame = +3

Query: 216 EFHGRSDEDVEDFLEKMEVACISNQIHDPAQMLRLLQICLKNDARVWSKTFE 371
+F G+ +D++D + + ++ + + DP ++LRL++ K D ++ KT E
Sbjct: 208 DFTGKGLQDLQDGVLRTPLSPVKTFLDDPLRILRLIRFACKFDFKIEKKTLE 259


>tr|A5H2P5|A5H2P5_LODEL Putative uncharacterized protein
OS=Lodderomyces elongisporus GN=LELG_05760 PE=3 SV=1
Length = 535

Score = 33.1 bits (74), Expect = 7.1
Identities = 14/52 (26%), Positives = 31/52 (59%)
Frame = +3

Query: 216 EFHGRSDEDVEDFLEKMEVACISNQIHDPAQMLRLLQICLKNDARVWSKTFE 371
+F G+ +D++D + + ++ + + DP ++LRL++ K D ++ KT E
Sbjct: 178 DFTGKGLQDLQDGVLRTPLSPVKTFLDDPLRILRLIRFACKFDFKIEKKTLE 229