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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP917561
Clone id YMU001_000102_D08
Library
Length 518
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000102_D08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
AGGGGCTATGTTAGTCCGGTTCAAGTGGATGGAGGCGTCAAATATAGAGCTCCAAGGATG
ATGCTACATGTGCTGGCGGGCCATTTTGGTCTCCATTGGAATGTGTTGAAGCTTCATGAA
GAATCTGTAAAGGGAGACTTCTTTGAATATGCATTCCTTGAGATGCTATATGCACGGATG
ATATTGCATGCAGGTTCAGAGATTTCTATTTTTGAGCTTTTCCCAGGGAATGCAGGGGCG
CCACGATCTATTGCAACAGCGTATCATGATTGGGAGGCAGCCCACATTTCACGAGGAGAA
ATATGGATTTCTCAATTCTCGGACGAAGAGATTCCAATACACACACAACAATTTTGTGGA
AACTTTATCGGGGCAGGTTGAACTGCCAGTTGCTGACATTGTGTCCAAGACTGCATGTGG
AAATTACCTGGTGGATGGACGAGCATTTGTACAATCAACAACAGGGAATAAGTTCGAATT
CTGGTTGCAGTTGAAAGGGGAGAAAGTGAGGTATGACA
■■Homology search results ■■ -
sp_hit_id Q2KJ63
Definition sp|Q2KJ63|KLKB1_BOVIN Plasma kallikrein OS=Bos taurus
Align length 66
Score (bit) 30.8
E-value 4.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917561|Adiantum capillus-veneris mRNA, clone:
YMU001_000102_D08.
         (518 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q2KJ63|KLKB1_BOVIN Plasma kallikrein OS=Bos taurus GN=KLKB1 P...    31   4.0  
sp|P13027|ARRS_MAIZE Anthocyanin regulatory R-S protein OS=Zea m...    31   4.0  
sp|P13526|ARLC_MAIZE Anthocyanin regulatory Lc protein OS=Zea ma...    31   4.0  
sp|P03235|YEC4_EBV Uncharacterized protein EC-RF4 OS=Epstein-Bar...    30   5.2  

>sp|Q2KJ63|KLKB1_BOVIN Plasma kallikrein OS=Bos taurus GN=KLKB1 PE=2
           SV=1
          Length = 636

 Score = 30.8 bits (68), Expect = 4.0
 Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
 Frame = +3

Query: 171 CTDDIACRFRDFYF*AFPRECRGATIYCNSVS*LGGSP----HFTRRNMDFS--ILGRRD 332
           CT  I C+F  F +  FP +CRG    C+    L GSP    + T+ +  +S  +  R D
Sbjct: 324 CTKMIRCQF--FTYSLFPEDCRGEKCKCSLRLSLDGSPTNITYGTQASSGYSLRLCKRGD 381

Query: 333 SNTHTT 350
           S   TT
Sbjct: 382 SRVCTT 387


>sp|P13027|ARRS_MAIZE Anthocyanin regulatory R-S protein OS=Zea mays
           GN=R-S PE=2 SV=1
          Length = 612

 Score = 30.8 bits (68), Expect = 4.0
 Identities = 17/43 (39%), Positives = 24/43 (55%)
 Frame = -2

Query: 181 SSVHIASQGMHIQRSLPLQILHEASTHSNGDQNGPPAHVASSL 53
           +SV + S  + +QRS  L+ L+EA     GD+   PA  A SL
Sbjct: 71  NSVELTSDQLVMQRSDQLRELYEALLSGEGDRRAAPARPAGSL 113


>sp|P13526|ARLC_MAIZE Anthocyanin regulatory Lc protein OS=Zea mays
           GN=LC PE=2 SV=1
          Length = 610

 Score = 30.8 bits (68), Expect = 4.0
 Identities = 17/43 (39%), Positives = 24/43 (55%)
 Frame = -2

Query: 181 SSVHIASQGMHIQRSLPLQILHEASTHSNGDQNGPPAHVASSL 53
           +SV + S  + +QRS  L+ L+EA     GD+   PA  A SL
Sbjct: 71  NSVELTSDQLVMQRSDQLRELYEALLSGEGDRRAAPARPAGSL 113


>sp|P03235|YEC4_EBV Uncharacterized protein EC-RF4 OS=Epstein-Barr
           virus (strain B95-8) GN=EC-RF4 PE=4 SV=1
          Length = 289

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 19/44 (43%), Positives = 24/44 (54%)
 Frame = +1

Query: 1   RGYVSPVQVDGGVKYRAPRMMLHVLAGHFGLHWNVLKLHEESVK 132
           RG+V  V V G V+   P  + HV+AGH  LH  V    EE V+
Sbjct: 17  RGWVDAVDVPGSVQNVGPVKVGHVVAGH-NLHAEVSDELEEGVE 59
tr_hit_id A5IZI7
Definition tr|A5IZI7|A5IZI7_MYCAP Putative uncharacterized protein OS=Mycoplasma agalactiae (strain PG2)
Align length 67
Score (bit) 34.3
E-value 3.8
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917561|Adiantum capillus-veneris mRNA, clone:
YMU001_000102_D08.
         (518 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A5IZI7|A5IZI7_MYCAP Putative uncharacterized protein OS=Mycop...    34   3.8  
tr|B2HMH4|B2HMH4_MYCMM Non-ribosomal peptide synthetase OS=Mycob...    33   6.5  
tr|A3DAL2|A3DAL2_SHEB5 Integrase, catalytic region OS=Shewanella...    33   6.5  
tr|A3D8F9|A3D8F9_SHEB5 Integrase, catalytic region OS=Shewanella...    33   6.5  
tr|A3D486|A3D486_SHEB5 Integrase, catalytic region OS=Shewanella...    33   6.5  
tr|A3CZ73|A3CZ73_SHEB5 Integrase, catalytic region OS=Shewanella...    33   6.5  
tr|A1RJP9|A1RJP9_SHESW Integrase, catalytic region OS=Shewanella...    33   6.5  
tr|A1REJ1|A1REJ1_SHESW Integrase, catalytic region OS=Shewanella...    33   6.5  
tr|A3IRB5|A3IRB5_9CHRO Cobalamin biosynthesis protein OS=Cyanoth...    33   6.5  
tr|A7BKQ2|A7BKQ2_9GAMM Putative uncharacterized protein OS=Beggi...    33   8.5  
tr|Q4D4B7|Q4D4B7_TRYCR Putative uncharacterized protein OS=Trypa...    33   8.5  

>tr|A5IZI7|A5IZI7_MYCAP Putative uncharacterized protein
           OS=Mycoplasma agalactiae (strain PG2) GN=MAG7460 PE=4
           SV=1
          Length = 286

 Score = 34.3 bits (77), Expect = 3.8
 Identities = 16/67 (23%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
 Frame = +2

Query: 275 RQPTFHEEKYGFLNSRTK-RFQYTHNNFVETL--SGQVELPVADIVSKTACGNYLVDGRA 445
           ++  F ++++  LN++ +  +++ H N+V+    +G+++  +  I+SK   G YL+    
Sbjct: 216 KKTQFSQDEFLNLNNKERLAYKFVHENYVDIKLSNGKIKSIIGFILSKNRTGQYLIKNNV 275

Query: 446 FVQSTTG 466
           F+Q   G
Sbjct: 276 FIQKKHG 282


>tr|B2HMH4|B2HMH4_MYCMM Non-ribosomal peptide synthetase
            OS=Mycobacterium marinum (strain ATCC BAA-535 / M)
            GN=MMAR_3779 PE=4 SV=1
          Length = 2976

 Score = 33.5 bits (75), Expect = 6.5
 Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
 Frame = +1

Query: 22   QVDGGVKYRAPRMML-HVLAGHFGLHWNVLKLHEESVKGDFFEYAFLEMLYARMILHAGS 198
            + DGGV YRAPR  L  +LA  FG    VL L    +  +FF      +  +R+++   +
Sbjct: 1346 EFDGGVAYRAPRDRLEQLLAALFG---EVLGLSRVGIDDEFFRIGGHSLSASRLVVRIRA 1402

Query: 199  EISI 210
            E+ +
Sbjct: 1403 ELDV 1406


>tr|A3DAL2|A3DAL2_SHEB5 Integrase, catalytic region OS=Shewanella
           baltica (strain OS155 / ATCC BAA-1091) GN=Sbal_4311 PE=4
           SV=1
          Length = 349

 Score = 33.5 bits (75), Expect = 6.5
 Identities = 17/40 (42%), Positives = 25/40 (62%)
 Frame = -1

Query: 167 SISRNAYSKKSPFTDSS*SFNTFQWRPKWPASTCSIILGA 48
           S+SR   S  +PF++S   F T ++RP+WPAS  S +  A
Sbjct: 228 SLSRPRVSNDNPFSESL--FKTLKYRPQWPASGFSCLATA 265


>tr|A3D8F9|A3D8F9_SHEB5 Integrase, catalytic region OS=Shewanella
           baltica (strain OS155 / ATCC BAA-1091) GN=Sbal_3545 PE=4
           SV=1
          Length = 317

 Score = 33.5 bits (75), Expect = 6.5
 Identities = 17/40 (42%), Positives = 25/40 (62%)
 Frame = -1

Query: 167 SISRNAYSKKSPFTDSS*SFNTFQWRPKWPASTCSIILGA 48
           S+SR   S  +PF++S   F T ++RP+WPAS  S +  A
Sbjct: 228 SLSRPRVSNDNPFSESL--FKTLKYRPQWPASGFSCLATA 265


>tr|A3D486|A3D486_SHEB5 Integrase, catalytic region OS=Shewanella
           baltica (strain OS155 / ATCC BAA-1091) GN=Sbal_2047 PE=4
           SV=1
          Length = 272

 Score = 33.5 bits (75), Expect = 6.5
 Identities = 17/40 (42%), Positives = 25/40 (62%)
 Frame = -1

Query: 167 SISRNAYSKKSPFTDSS*SFNTFQWRPKWPASTCSIILGA 48
           S+SR   S  +PF++S   F T ++RP+WPAS  S +  A
Sbjct: 228 SLSRPRVSNDNPFSESL--FKTLKYRPQWPASGFSCLATA 265


>tr|A3CZ73|A3CZ73_SHEB5 Integrase, catalytic region OS=Shewanella
           baltica (strain OS155 / ATCC BAA-1091) GN=Sbal_0252 PE=4
           SV=1
          Length = 349

 Score = 33.5 bits (75), Expect = 6.5
 Identities = 17/40 (42%), Positives = 25/40 (62%)
 Frame = -1

Query: 167 SISRNAYSKKSPFTDSS*SFNTFQWRPKWPASTCSIILGA 48
           S+SR   S  +PF++S   F T ++RP+WPAS  S +  A
Sbjct: 228 SLSRPRVSNDNPFSESL--FKTLKYRPQWPASGFSCLATA 265


>tr|A1RJP9|A1RJP9_SHESW Integrase, catalytic region OS=Shewanella
           sp. (strain W3-18-1) GN=Sputw3181_2066 PE=4 SV=1
          Length = 349

 Score = 33.5 bits (75), Expect = 6.5
 Identities = 17/40 (42%), Positives = 25/40 (62%)
 Frame = -1

Query: 167 SISRNAYSKKSPFTDSS*SFNTFQWRPKWPASTCSIILGA 48
           S+SR   S  +PF++S   F T ++RP+WPAS  S +  A
Sbjct: 228 SLSRPRVSNDNPFSESL--FKTLKYRPQWPASGFSCLATA 265


>tr|A1REJ1|A1REJ1_SHESW Integrase, catalytic region OS=Shewanella
           sp. (strain W3-18-1) GN=Sputw3181_0234 PE=4 SV=1
          Length = 349

 Score = 33.5 bits (75), Expect = 6.5
 Identities = 17/40 (42%), Positives = 25/40 (62%)
 Frame = -1

Query: 167 SISRNAYSKKSPFTDSS*SFNTFQWRPKWPASTCSIILGA 48
           S+SR   S  +PF++S   F T ++RP+WPAS  S +  A
Sbjct: 228 SLSRPRVSNDNPFSESL--FKTLKYRPQWPASGFSCLATA 265


>tr|A3IRB5|A3IRB5_9CHRO Cobalamin biosynthesis protein OS=Cyanothece
           sp. CCY 0110 GN=cobD PE=4 SV=1
          Length = 323

 Score = 33.5 bits (75), Expect = 6.5
 Identities = 23/81 (28%), Positives = 36/81 (44%)
 Frame = +1

Query: 64  LHVLAGHFGLHWNVLKLHEESVKGDFFEYAFLEMLYARMILHAGSEISIFELFPGNAGAP 243
           L V +G  G   N++K H +   G FFE   L   +A   L   +   +  L  G   + 
Sbjct: 65  LIVASGIVGWSINLIKYHLDPFLGIFFEIILLASCFAGRSLRLAALDVLLPLRNGKIDSA 124

Query: 244 RSIATAYHDWEAAHISRGEIW 306
           R+  + Y   + A++S  EIW
Sbjct: 125 RTKLSQYVGRDTANLSPEEIW 145


>tr|A7BKQ2|A7BKQ2_9GAMM Putative uncharacterized protein
           OS=Beggiatoa sp. SS GN=BGS_0671 PE=4 SV=1
          Length = 427

 Score = 33.1 bits (74), Expect = 8.5
 Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
 Frame = -2

Query: 439 SIHQVISTCSLG----HNVSNWQFNLPR*SFHKIVVCVLESLRPRIEKSIFLLVKCGLPP 272
           SIH+V++T +      H   N Q + PR S HK+VV  L SLR  I K++  L    +  
Sbjct: 198 SIHKVVNTLASPRIFIHKAVNKQPS-PRISIHKVVVKTLVSLRIFIHKAVNTLASPRI-S 255

Query: 271 NHDTLLQ*IVAPLHSLGK 218
           NH  ++  + +P  S+ K
Sbjct: 256 NHKVVVNTLASPRISIHK 273