BP917565 |
Clone id |
YMU001_000102_E01 |
Library |
YMU01 |
Length |
361 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000102_E01. |
Accession |
BP917565 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL2430Contig1 |
Sequence |
CAGGTAGATGTCAGTCAAGCAATCTTTAGATTCCCATGACGGGCCTATTCCAAATATAGC CGTATCATAGGCAGCTGTCTTCAAGTCCACTCTTCCACAAAGAGTCGCTTTAAGCGTAAA CATTGCAATATGAGGACCCAGATAGAGCACAAACGTGTGCAAGCCAGATCCTAGTCCAAT TGATGAAGCAATGCCAAGACCAACCCACCAAGAAGCATATCGCAAGTATATTGACACTTC TTTCATGAACTGTTCATGAGGTCCTCGGATAGTGTTGAGCTTTCTCCATCCAAAAAAAGT AAGACAAGCAAGAAATAGCAGAACCTTGTGGGAGGCAATATACAGTATCGTCTCCCCTAT G |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q6NYY9 |
Definition |
sp|Q6NYY9|TMM49_DANRE Transmembrane protein 49 OS=Danio rerio |
Align length |
89 |
Score (bit) |
53.1 |
E-value |
4.0e-07 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q5XF36 |
Definition |
tr|Q5XF36|Q5XF36_ARATH At4g14950 OS=Arabidopsis thaliana |
Align length |
115 |
Score (bit) |
100.0 |
E-value |
5.0e-20 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917565|Adiantum capillus-veneris mRNA, clone: YMU001_000102_E01. (361 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q5XF36|Q5XF36_ARATH At4g14950 OS=Arabidopsis thaliana PE=2 SV=1 100 5e-20 tr|Q3EA26|Q3EA26_ARATH Uncharacterized protein At4g14950.2 OS=Ar... 100 5e-20 tr|Q3EA25|Q3EA25_ARATH Uncharacterized protein At4g14950.3 OS=Ar... 100 5e-20 tr|O23350|O23350_ARATH Putative uncharacterized protein dl3515w ... 100 5e-20 tr|Q93YX1|Q93YX1_ARATH Putative uncharacterized protein At4g1495... 100 6e-20 tr|B8LRU2|B8LRU2_PICSI Putative uncharacterized protein OS=Picea... 99 1e-19 tr|Q8LG86|Q8LG86_ARATH Putative uncharacterized protein OS=Arabi... 96 9e-19 tr|A9RE86|A9RE86_PHYPA Predicted protein OS=Physcomitrella paten... 96 1e-18 tr|Q0WTG8|Q0WTG8_ARATH Putative uncharacterized protein At1g0536... 94 3e-18 tr|B7FLS1|B7FLS1_MEDTR Putative uncharacterized protein OS=Medic... 92 2e-17 tr|A9RR45|A9RR45_PHYPA Predicted protein OS=Physcomitrella paten... 91 4e-17 tr|B6TDW5|B6TDW5_MAIZE Transmembrane protein 49 OS=Zea mays PE=2... 90 5e-17 tr|B4FNY3|B4FNY3_MAIZE Putative uncharacterized protein OS=Zea m... 90 5e-17 tr|Q5ZCF3|Q5ZCF3_ORYSJ cDNA clone:J013000O19, full insert sequen... 89 1e-16 tr|B4FZN0|B4FZN0_MAIZE Putative uncharacterized protein OS=Zea m... 89 1e-16 tr|O23033|O23033_ARATH YUP8H12.2 protein OS=Arabidopsis thaliana... 86 9e-16 tr|A7NWK6|A7NWK6_VITVI Chromosome chr5 scaffold_2, whole genome ... 81 3e-14 tr|A3BLC5|A3BLC5_ORYSJ Putative uncharacterized protein OS=Oryza... 81 3e-14 tr|A2YMU5|A2YMU5_ORYSI Putative uncharacterized protein OS=Oryza... 81 3e-14 tr|B8AAE2|B8AAE2_ORYSI Putative uncharacterized protein OS=Oryza... 77 4e-13 tr|A2ZYE7|A2ZYE7_ORYSJ Putative uncharacterized protein OS=Oryza... 77 4e-13 tr|A8XMQ2|A8XMQ2_CAEBR Putative uncharacterized protein OS=Caeno... 57 6e-07 tr|Q9XWU8|Q9XWU8_CAEEL Protein Y37D8A.22, partially confirmed by... 54 5e-06 tr|Q4T8X8|Q4T8X8_TETNG Chromosome undetermined SCAF7707, whole g... 51 3e-05 tr|Q5BYP8|Q5BYP8_SCHJA SJCHGC03300 protein (Fragment) OS=Schisto... 51 3e-05 tr|B3S1K5|B3S1K5_TRIAD Putative uncharacterized protein OS=Trich... 51 3e-05 tr|B3M4B8|B3M4B8_DROAN GF25286 OS=Drosophila ananassae GN=GF2528... 51 3e-05 tr|B7PTG6|B7PTG6_IXOSC Vacuole membrane protein, putative OS=Ixo... 50 6e-05 tr|B4N4L0|B4N4L0_DROWI GK10493 OS=Drosophila willistoni GN=GK104... 50 7e-05 tr|B4IZB2|B4IZB2_DROGR GH15080 OS=Drosophila grimshawi GN=GH1508... 49 1e-04
>tr|Q5XF36|Q5XF36_ARATH At4g14950 OS=Arabidopsis thaliana PE=2 SV=1 Length = 416
Score = 100 bits (248), Expect = 5e-20 Identities = 53/115 (46%), Positives = 66/115 (57%), Gaps = 1/115 (0%) Frame = -2
Query: 360 IGETILYIASHKV-LLFLACLTFFGWRKLNTIRGPHEQFMKEVSIYLRYASWWVXXXXXX 184 I +I Y+ +H + + L L T+ GPH + ++EV Y+RY WW+ Sbjct: 50 IKRSISYLLAHGGWFILITTLLVVSGGLLVTVDGPHGKHVEEVLEYVRYGLWWIALGVAS 109
Query: 183 XXXXXXXLHTFVLYLGPHIAMFTLKATLCGRVDLKTAAYDTAIFGIGPSWESKDC 19 LHTFVLYLGPHIA+FTLKATLCGRVDLK+A YDT PSW K C Sbjct: 110 SIGLGSGLHTFVLYLGPHIALFTLKATLCGRVDLKSAPYDTIQLKRVPSWLDKSC 164
>tr|Q3EA26|Q3EA26_ARATH Uncharacterized protein At4g14950.2 OS=Arabidopsis thaliana GN=At4g14950 PE=4 SV=1 Length = 355
Score = 100 bits (248), Expect = 5e-20 Identities = 53/115 (46%), Positives = 66/115 (57%), Gaps = 1/115 (0%) Frame = -2
Query: 360 IGETILYIASHKV-LLFLACLTFFGWRKLNTIRGPHEQFMKEVSIYLRYASWWVXXXXXX 184 I +I Y+ +H + + L L T+ GPH + ++EV Y+RY WW+ Sbjct: 40 IKRSISYLLAHGGWFILITTLLVVSGGLLVTVDGPHGKHVEEVLEYVRYGLWWIALGVAS 99
Query: 183 XXXXXXXLHTFVLYLGPHIAMFTLKATLCGRVDLKTAAYDTAIFGIGPSWESKDC 19 LHTFVLYLGPHIA+FTLKATLCGRVDLK+A YDT PSW K C Sbjct: 100 SIGLGSGLHTFVLYLGPHIALFTLKATLCGRVDLKSAPYDTIQLKRVPSWLDKSC 154
>tr|Q3EA25|Q3EA25_ARATH Uncharacterized protein At4g14950.3 OS=Arabidopsis thaliana GN=At4g14950 PE=4 SV=1 Length = 406
Score = 100 bits (248), Expect = 5e-20 Identities = 53/115 (46%), Positives = 66/115 (57%), Gaps = 1/115 (0%) Frame = -2
Query: 360 IGETILYIASHKV-LLFLACLTFFGWRKLNTIRGPHEQFMKEVSIYLRYASWWVXXXXXX 184 I +I Y+ +H + + L L T+ GPH + ++EV Y+RY WW+ Sbjct: 40 IKRSISYLLAHGGWFILITTLLVVSGGLLVTVDGPHGKHVEEVLEYVRYGLWWIALGVAS 99
Query: 183 XXXXXXXLHTFVLYLGPHIAMFTLKATLCGRVDLKTAAYDTAIFGIGPSWESKDC 19 LHTFVLYLGPHIA+FTLKATLCGRVDLK+A YDT PSW K C Sbjct: 100 SIGLGSGLHTFVLYLGPHIALFTLKATLCGRVDLKSAPYDTIQLKRVPSWLDKSC 154
>tr|O23350|O23350_ARATH Putative uncharacterized protein dl3515w (Putative uncharacterized protein AT4g14950) (Fragment) OS=Arabidopsis thaliana GN=dl3515w PE=4 SV=2 Length = 797
Score = 100 bits (248), Expect = 5e-20 Identities = 53/115 (46%), Positives = 66/115 (57%), Gaps = 1/115 (0%) Frame = -2
Query: 360 IGETILYIASHKV-LLFLACLTFFGWRKLNTIRGPHEQFMKEVSIYLRYASWWVXXXXXX 184 I +I Y+ +H + + L L T+ GPH + ++EV Y+RY WW+ Sbjct: 33 IKRSISYLLAHGGWFILITTLLVVSGGLLVTVDGPHGKHVEEVLEYVRYGLWWIALGVAS 92
Query: 183 XXXXXXXLHTFVLYLGPHIAMFTLKATLCGRVDLKTAAYDTAIFGIGPSWESKDC 19 LHTFVLYLGPHIA+FTLKATLCGRVDLK+A YDT PSW K C Sbjct: 93 SIGLGSGLHTFVLYLGPHIALFTLKATLCGRVDLKSAPYDTIQLKRVPSWLDKSC 147
>tr|Q93YX1|Q93YX1_ARATH Putative uncharacterized protein At4g14950 OS=Arabidopsis thaliana GN=At4g14950 PE=2 SV=1 Length = 416
Score = 99.8 bits (247), Expect = 6e-20 Identities = 53/115 (46%), Positives = 66/115 (57%), Gaps = 1/115 (0%) Frame = -2
Query: 360 IGETILYIASHKV-LLFLACLTFFGWRKLNTIRGPHEQFMKEVSIYLRYASWWVXXXXXX 184 I +I Y+ +H + + L L T+ GPH + ++EV Y+RY WW+ Sbjct: 50 IKRSISYLLAHGGWFILITTLLVVSGGLLVTVDGPHGKHVEEVLGYVRYGLWWIALGVAS 109
Query: 183 XXXXXXXLHTFVLYLGPHIAMFTLKATLCGRVDLKTAAYDTAIFGIGPSWESKDC 19 LHTFVLYLGPHIA+FTLKATLCGRVDLK+A YDT PSW K C Sbjct: 110 SIGLGSGLHTFVLYLGPHIALFTLKATLCGRVDLKSAPYDTIQLKRVPSWLDKSC 164
>tr|B8LRU2|B8LRU2_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 449
Score = 98.6 bits (244), Expect = 1e-19 Identities = 52/115 (45%), Positives = 64/115 (55%), Gaps = 1/115 (0%) Frame = -2
Query: 360 IGETILYIASHKVLLFLACLTFFGWRK-LNTIRGPHEQFMKEVSIYLRYASWWVXXXXXX 184 I ++ +Y +H L L L L T+ GPHE+ + E+ Y R+ WWV Sbjct: 59 IKQSAIYAMTHGWLFLLTTLLSLSIGVILLTVNGPHEKHVDELVHYFRFGLWWVGLGVAS 118
Query: 183 XXXXXXXLHTFVLYLGPHIAMFTLKATLCGRVDLKTAAYDTAIFGIGPSWESKDC 19 LHTFVLYLGPHIA+FTL+AT CGRVDLK+A YDT PSW K C Sbjct: 119 SIGLGSGLHTFVLYLGPHIAIFTLRATQCGRVDLKSAPYDTIQLNRAPSWIDKSC 173
>tr|Q8LG86|Q8LG86_ARATH Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1 Length = 416
Score = 95.9 bits (237), Expect = 9e-19 Identities = 49/109 (44%), Positives = 63/109 (57%), Gaps = 1/109 (0%) Frame = -2
Query: 342 YIASHKVLLFLACLTFFGWRKLN-TIRGPHEQFMKEVSIYLRYASWWVXXXXXXXXXXXX 166 Y+ ++ L L C F + L T+ GPH + ++E+S Y R+ WW+ Sbjct: 55 YLLANVGWLILFCSIFVAFAALLVTLDGPHVKHVEELSEYTRFGLWWIFLGVASSIGLGS 114
Query: 165 XLHTFVLYLGPHIAMFTLKATLCGRVDLKTAAYDTAIFGIGPSWESKDC 19 LHTFVLYLGPHIA+FT+KA CGRVDLK+A YDT PSW K C Sbjct: 115 GLHTFVLYLGPHIALFTIKAMQCGRVDLKSAVYDTIQLKRSPSWLDKPC 163
>tr|A9RE86|A9RE86_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_112472 PE=4 SV=1 Length = 417
Score = 95.5 bits (236), Expect = 1e-18 Identities = 42/84 (50%), Positives = 53/84 (63%) Frame = -2
Query: 270 IRGPHEQFMKEVSIYLRYASWWVXXXXXXXXXXXXXLHTFVLYLGPHIAMFTLKATLCGR 91 I GPHE +++E Y R+A WW+ LHTFVLYLGPHIAMF ++A+ CGR Sbjct: 72 IDGPHEYYLREAIAYFRFAVWWIGLGVASSIGLGSGLHTFVLYLGPHIAMFAMRASQCGR 131
Query: 90 VDLKTAAYDTAIFGIGPSWESKDC 19 VDLK YDT +G SW+ K+C Sbjct: 132 VDLKAMQYDTPQWGFPSSWQHKEC 155
>tr|Q0WTG8|Q0WTG8_ARATH Putative uncharacterized protein At1g05360 (Fragment) OS=Arabidopsis thaliana GN=At1g05360 PE=2 SV=1 Length = 372
Score = 94.0 bits (232), Expect = 3e-18 Identities = 48/109 (44%), Positives = 62/109 (56%), Gaps = 1/109 (0%) Frame = -2
Query: 342 YIASHKVLLFLACLTFFGWRKLN-TIRGPHEQFMKEVSIYLRYASWWVXXXXXXXXXXXX 166 Y+ ++ L L C F + L T+ GPH + ++E+S Y R+ WW+ Sbjct: 11 YLLANVGWLILFCSIFVAFAALLVTLDGPHVKHVEELSEYTRFGLWWIFLGVASSIGLGS 70
Query: 165 XLHTFVLYLGPHIAMFTLKATLCGRVDLKTAAYDTAIFGIGPSWESKDC 19 LHTFVLYLGPHIA+FT+K CGRVDLK+A YDT PSW K C Sbjct: 71 GLHTFVLYLGPHIALFTIKVMQCGRVDLKSAIYDTIQLKRSPSWLDKPC 119
>tr|B7FLS1|B7FLS1_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 417
Score = 91.7 bits (226), Expect = 2e-17 Identities = 51/116 (43%), Positives = 67/116 (57%), Gaps = 2/116 (1%) Frame = -2
Query: 360 IGETILYIASHK--VLLFLACLTFFGWRKLNTIRGPHEQFMKEVSIYLRYASWWVXXXXX 187 I +T+LY+ + ++LF + G L T+ HE+ ++E Y R+ WWV Sbjct: 53 IKKTMLYLLAKGGWLMLFSVAVGTLGV-VLMTLGCLHEKHLEEFLEYFRFGLWWVALGVA 111
Query: 186 XXXXXXXXLHTFVLYLGPHIAMFTLKATLCGRVDLKTAAYDTAIFGIGPSWESKDC 19 LHTFVLYLGPHIA+FT+KA CGRVDLK+A YDT GPSW K+C Sbjct: 112 SSIGLGSGLHTFVLYLGPHIALFTIKAMQCGRVDLKSAPYDTIQLNRGPSWLDKNC 167
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