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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP917566
Clone id YMU001_000102_E02
Library
Length 374
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000102_E02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
ATTATACCTACAATCCCCTCTGGAAATAGTCTCCTCGGCGGGAGCTAAAGCATCAATTTT
CCGTGTCACCTCACGGTCCAGCATACGAAGCATTCTTATCTCCTCATCGCGATCTATTTG
CCCCAATATCGTTACCATCCCATCATGGAACGCCTTCCGCTCCAGCTCTTGTCTCTTCAA
CTCCTCTTGCATACCTTTTCTCTTCCGTTCAAGTTCCTTTCGCGTTCGTCTTCCTTTTCA
AAGCATCTCTTCACAGTCCCAATCAAAACGCCTTTTATTCCTGTCATAGGCCGTGATCCA
GTTGGCATAACGCTTCCTTCACCTCCTTTCCGCAGCTCAAGCGCTCTTCCATTTCACCTT
CACTCCAGGACAAT
■■Homology search results ■■ -
sp_hit_id Q86WD7
Definition sp|Q86WD7|SPA9_HUMAN Serpin A9 OS=Homo sapiens
Align length 59
Score (bit) 33.1
E-value 0.44
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917566|Adiantum capillus-veneris mRNA, clone:
YMU001_000102_E02.
         (374 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q86WD7|SPA9_HUMAN Serpin A9 OS=Homo sapiens GN=SERPINA9 PE=2 ...    33   0.44 
sp|Q9Y6R4|M3K4_HUMAN Mitogen-activated protein kinase kinase kin...    33   0.57 
sp|Q9GL27|BRAC_CANFA Brachyury protein OS=Canis familiaris GN=T ...    33   0.57 
sp|Q5F5S8|RL4_NEIG1 50S ribosomal protein L4 OS=Neisseria gonorr...    32   0.98 
sp|A1KRH4|RL4_NEIMF 50S ribosomal protein L4 OS=Neisseria mening...    32   1.3  
sp|P61057|RL4_NEIMB 50S ribosomal protein L4 OS=Neisseria mening...    32   1.3  
sp|P61056|RL4_NEIMA 50S ribosomal protein L4 OS=Neisseria mening...    32   1.3  
sp|A9M3W5|RL4_NEIM0 50S ribosomal protein L4 OS=Neisseria mening...    32   1.3  
sp|Q09854|MOK11_SCHPO Cell wall alpha-1,3-glucan synthase mok11 ...    31   1.7  
sp|Q8R3P2|DTX2_MOUSE Protein deltex-2 OS=Mus musculus GN=Dtx2 PE...    31   2.2  
sp|Q92859|NEO1_HUMAN Neogenin OS=Homo sapiens GN=NEO1 PE=1 SV=2        27   2.7  
sp|P97603|NEO1_RAT Neogenin (Fragment) OS=Rattus norvegicus GN=N...    27   2.7  
sp|Q4ZG55|GREB1_HUMAN Protein GREB1 OS=Homo sapiens GN=GREB1 PE=...    30   2.8  
sp|Q5Y5T5|ZDHC8_MOUSE Probable palmitoyltransferase ZDHHC8 OS=Mu...    30   4.9  
sp|P04052|RPB1_DROME DNA-directed RNA polymerase II subunit RPB1...    30   4.9  
sp|O95153|RIMB1_HUMAN Peripheral-type benzodiazepine receptor-as...    30   4.9  
sp|Q819Y5|DPO3_BACCR DNA polymerase III polC-type OS=Bacillus ce...    29   6.3  
sp|Q2THX0|ZDHC8_PANTR Probable palmitoyltransferase ZDHHC8 OS=Pa...    29   8.3  
sp|Q9ULC8|ZDHC8_HUMAN Probable palmitoyltransferase ZDHHC8 OS=Ho...    29   8.3  
sp|P50450|THBG_SHEEP Thyroxine-binding globulin OS=Ovis aries GN...    29   8.3  
sp|Q6ZQM0|RFFL_MOUSE E3 ubiquitin-protein ligase rififylin OS=Mu...    29   8.3  

>sp|Q86WD7|SPA9_HUMAN Serpin A9 OS=Homo sapiens GN=SERPINA9 PE=2
           SV=3
          Length = 417

 Score = 33.1 bits (74), Expect = 0.44
 Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
 Frame = +3

Query: 114 LFAPISLPSHHGTPSA---PALVSSTPLAYLFSSVQVPFAFVFLFKASLHSPNQNAFYS 281
           L API   S    PSA   P+   STP + ++S +   FAF    +  L +P+QN F+S
Sbjct: 14  LCAPIYCVSPANAPSAYPRPSSTKSTPASQVYS-LNTDFAFRLYRRLVLETPSQNIFFS 71


>sp|Q9Y6R4|M3K4_HUMAN Mitogen-activated protein kinase kinase kinase 4
            OS=Homo sapiens GN=MAP3K4 PE=1 SV=1
          Length = 1607

 Score = 32.7 bits (73), Expect = 0.57
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = +3

Query: 69   PHGPAYEAFLSPHRDLFAPISLPSHHGTPSAPALVSSTP 185
            PH P    +L+ HR+   P+ +P  H  P  P L+  TP
Sbjct: 1133 PHSPVTGLYLAIHRNSPRPMKVPRCHSDPPNPHLIIPTP 1171


>sp|Q9GL27|BRAC_CANFA Brachyury protein OS=Canis familiaris GN=T
           PE=2 SV=1
          Length = 435

 Score = 32.7 bits (73), Expect = 0.57
 Identities = 21/69 (30%), Positives = 29/69 (42%)
 Frame = +3

Query: 99  SPHRDLFAPISLPSHHGTPSAPALVSSTPLAYLFSSVQVPFAFVFLFKASLHSPNQNAFY 278
           +PH     P+SLPS HG    PAL +  P  Y       P  +     +  +S N +A  
Sbjct: 259 TPHPQFGGPLSLPSTHGCERYPALRNHRPSPY-------PSPYAHRNNSPTYSDNPSACL 311

Query: 279 SCHRP*SSW 305
           S  +   SW
Sbjct: 312 SMLQSHDSW 320


>sp|Q5F5S8|RL4_NEIG1 50S ribosomal protein L4 OS=Neisseria
           gonorrhoeae (strain ATCC 700825 / FA 1090) GN=rplD PE=3
           SV=1
          Length = 206

 Score = 32.0 bits (71), Expect = 0.98
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = -3

Query: 171 QELERKAFHDGMVTILGQIDRDEEIRMLRMLDREVTR 61
           Q++ RK +  GM TIL Q+ RDE + ++  L  E  +
Sbjct: 99  QKVNRKMYRAGMATILSQLARDERLFVIEALTAETPK 135


>sp|A1KRH4|RL4_NEIMF 50S ribosomal protein L4 OS=Neisseria
           meningitidis serogroup C / serotype 2a (strain ATCC
           700532 / FAM18) GN=rplD PE=3 SV=1
          Length = 206

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -3

Query: 171 QELERKAFHDGMVTILGQIDRDEEIRMLRMLDREVTR 61
           Q++ RK +  GM TIL Q+ RDE +  +  L  E  +
Sbjct: 99  QKVNRKMYRAGMATILSQLTRDERLFAIEALTAETPK 135


>sp|P61057|RL4_NEIMB 50S ribosomal protein L4 OS=Neisseria
           meningitidis serogroup B GN=rplD PE=3 SV=1
          Length = 206

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -3

Query: 171 QELERKAFHDGMVTILGQIDRDEEIRMLRMLDREVTR 61
           Q++ RK +  GM TIL Q+ RDE +  +  L  E  +
Sbjct: 99  QKVNRKMYRAGMATILSQLTRDERLFAIEALTAETPK 135


>sp|P61056|RL4_NEIMA 50S ribosomal protein L4 OS=Neisseria
           meningitidis serogroup A GN=rplD PE=3 SV=1
          Length = 206

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -3

Query: 171 QELERKAFHDGMVTILGQIDRDEEIRMLRMLDREVTR 61
           Q++ RK +  GM TIL Q+ RDE +  +  L  E  +
Sbjct: 99  QKVNRKMYRAGMATILSQLTRDERLFAIEALTAETPK 135


>sp|A9M3W5|RL4_NEIM0 50S ribosomal protein L4 OS=Neisseria
           meningitidis serogroup C (strain 053442) GN=rplD PE=3
           SV=1
          Length = 206

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -3

Query: 171 QELERKAFHDGMVTILGQIDRDEEIRMLRMLDREVTR 61
           Q++ RK +  GM TIL Q+ RDE +  +  L  E  +
Sbjct: 99  QKVNRKMYRAGMATILSQLTRDERLFAIEALTAETPK 135


>sp|Q09854|MOK11_SCHPO Cell wall alpha-1,3-glucan synthase mok11
            OS=Schizosaccharomyces pombe GN=mok11 PE=2 SV=2
          Length = 2397

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 18/44 (40%), Positives = 24/44 (54%)
 Frame = +3

Query: 231  FLFKASLHSPNQNAFYSCHRP*SSWHNASFTSFPQLKRSSISPS 362
            FL + S  S  +N FY  H P  S+ + S T  PQ +R  I+PS
Sbjct: 1019 FLSRVSPSSLEENVFYIQHPPPKSYLSWSVTFDPQRRRYYINPS 1062


>sp|Q8R3P2|DTX2_MOUSE Protein deltex-2 OS=Mus musculus GN=Dtx2 PE=1
           SV=2
          Length = 619

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 8/46 (17%)
 Frame = +3

Query: 78  PAYEAFLSPHR--------DLFAPISLPSHHGTPSAPALVSSTPLA 191
           PAY A  +PHR          FAP + PS  G  SAP L ++ P A
Sbjct: 222 PAYPAPQAPHRTTTVSGAHQAFAPYNKPSLSGARSAPRLNTTNPWA 267
tr_hit_id B6QB06
Definition tr|B6QB06|B6QB06_PENMA CCR4-NOT core complex subunit Not4, putative OS=Penicillium marneffei ATCC 18224
Align length 50
Score (bit) 36.6
E-value 0.64
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917566|Adiantum capillus-veneris mRNA, clone:
YMU001_000102_E02.
         (374 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B6QB06|B6QB06_PENMA CCR4-NOT core complex subunit Not4, putat...    37   0.64 
tr|Q5VTT9|Q5VTT9_HUMAN Mitogen-activated protein kinase kinase k...    35   1.4  
tr|A8MVL6|A8MVL6_HUMAN Putative uncharacterized protein MAP3K4 O...    35   1.4  
tr|A6H8W0|A6H8W0_HUMAN Mitogen-activated protein kinase kinase k...    35   1.4  
tr|Q2BNT0|Q2BNT0_9GAMM Putative uncharacterized protein OS=Neptu...    33   9.2  
tr|B7ZLD3|B7ZLD3_HUMAN MAP3K4 protein OS=Homo sapiens GN=MAP3K4 ...    33   9.2  
tr|B6HX39|B6HX39_PENCH Pc24g02660 protein OS=Penicillium chrysog...    33   9.2  

>tr|B6QB06|B6QB06_PENMA CCR4-NOT core complex subunit Not4, putative
           OS=Penicillium marneffei ATCC 18224 GN=PMAA_064610 PE=4
           SV=1
          Length = 1489

 Score = 36.6 bits (83), Expect = 0.64
 Identities = 24/50 (48%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
 Frame = +3

Query: 69  PHGPAYEAFLSPHRDLFAP---ISLPSHHGTPSAPALVSSTPLAYLFSSV 209
           PHG    AF S  +DL +P   ISLPS HG P  PA    TPL     SV
Sbjct: 832 PHGHPPAAFFSDKKDLESPEFSISLPS-HGPPGLPASRRGTPLQKSLDSV 880


>tr|Q5VTT9|Q5VTT9_HUMAN Mitogen-activated protein kinase kinase kinase
            4 OS=Homo sapiens GN=MAP3K4 PE=2 SV=1
          Length = 1498

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = +3

Query: 69   PHGPAYEAFLSPHRDLFAPISLPSHHGTPSAPALVSSTPLAYLFSSV 209
            PH P    +L+ HR+   P+ +P  H  P  P L+  TP  +  SSV
Sbjct: 1133 PHSPVTGLYLAIHRNSPRPMKVPRCHSDPPNPHLIIPTPEGFRGSSV 1179


>tr|A8MVL6|A8MVL6_HUMAN Putative uncharacterized protein MAP3K4
            OS=Homo sapiens GN=MAP3K4 PE=4 SV=1
          Length = 1558

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = +3

Query: 69   PHGPAYEAFLSPHRDLFAPISLPSHHGTPSAPALVSSTPLAYLFSSV 209
            PH P    +L+ HR+   P+ +P  H  P  P L+  TP  +  SSV
Sbjct: 1133 PHSPVTGLYLAIHRNSPRPMKVPRCHSDPPNPHLIIPTPEGFRGSSV 1179


>tr|A6H8W0|A6H8W0_HUMAN Mitogen-activated protein kinase kinase kinase
            4 OS=Homo sapiens GN=MAP3K4 PE=2 SV=1
          Length = 1558

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = +3

Query: 69   PHGPAYEAFLSPHRDLFAPISLPSHHGTPSAPALVSSTPLAYLFSSV 209
            PH P    +L+ HR+   P+ +P  H  P  P L+  TP  +  SSV
Sbjct: 1133 PHSPVTGLYLAIHRNSPRPMKVPRCHSDPPNPHLIIPTPEGFRGSSV 1179


>tr|Q2BNT0|Q2BNT0_9GAMM Putative uncharacterized protein
           OS=Neptuniibacter caesariensis GN=MED92_10314 PE=4 SV=1
          Length = 264

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 23/89 (25%), Positives = 38/89 (42%)
 Frame = +3

Query: 108 RDLFAPISLPSHHGTPSAPALVSSTPLAYLFSSVQVPFAFVFLFKASLHSPNQNAFYSCH 287
           +D F  ++L  HHG P+            L    + P+   +    S  +P   A Y+ +
Sbjct: 80  KDDFRCLALMQHHGAPTR-----------LLDFTKSPYVASYFALQSCTTPA--AVYAVN 126

Query: 288 RP*SSWHNASFTSFPQLKRSSISPSLQDN 374
            P + WH A+    PQ+ R +I P   D+
Sbjct: 127 TP-ALWHEATPPGLPQMTRDAIDPRNSDS 154


>tr|B7ZLD3|B7ZLD3_HUMAN MAP3K4 protein OS=Homo sapiens GN=MAP3K4 PE=2
            SV=1
          Length = 1607

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = +3

Query: 69   PHGPAYEAFLSPHRDLFAPISLPSHHGTPSAPALVSSTP 185
            PH P    +L+ HR+   P+ +P  H  P  P L+  TP
Sbjct: 1133 PHSPVTGLYLAIHRNSPRPMKVPRCHSDPPNPHLIIPTP 1171


>tr|B6HX39|B6HX39_PENCH Pc24g02660 protein OS=Penicillium
           chrysogenum Wisconsin 54-1255 GN=Pc24g02660 PE=4 SV=1
          Length = 320

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 16/41 (39%), Positives = 25/41 (60%)
 Frame = +3

Query: 156 SAPALVSSTPLAYLFSSVQVPFAFVFLFKASLHSPNQNAFY 278
           SAPAL  + PLA +  S ++P   V +FK++ H P+  + Y
Sbjct: 62  SAPALQDNVPLALIRESGKLPTPTVSVFKSTSHIPSSTSDY 102