BP917573 |
Clone id |
YMU001_000102_E11 |
Library |
YMU01 |
Length |
336 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000102_E11. |
Accession |
BP917573 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL2782Contig1 |
Sequence |
CTGAGGGCTGATGTACGCGGCGGCACGTGGGGGGGGAGGGAAGCGCGCGTGCGAGAGAGA GAGATTTGCACCCCACAACCACGTCCTCACCTGACACAAAACGCCTTCCAAGGGGCAAAA AAAAAAAATCAAACTCCCAAGTCCCTGCTGCTCCCACATGGCACCCTCCTGACTCCTCAA TATCCGACATCCTCAATTATCAGTTTATAGGCGCCAATCATACAGTTTCTCAAACAGTCG CCTCTCTACAGCTGTGTGTAGACACTAAATAAGTCTCCTCCTTTCGCACGCTGAGTGAAG GGTGCAGCGATCAATATGGAAGATGTAGTAATGCAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P23881 |
Definition |
sp|P23881|TCEA3_MOUSE Transcription elongation factor A protein 3 OS=Mus musculus |
Align length |
47 |
Score (bit) |
33.1 |
E-value |
0.44 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B7ZYV0 |
Definition |
tr|B7ZYV0|B7ZYV0_MAIZE Putative uncharacterized protein OS=Zea mays |
Align length |
36 |
Score (bit) |
44.7 |
E-value |
0.002 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917573|Adiantum capillus-veneris mRNA, clone: YMU001_000102_E11. (336 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B7ZYV0|B7ZYV0_MAIZE Putative uncharacterized protein OS=Zea m... 45 0.002 tr|B6SL14|B6SL14_MAIZE ACR4 OS=Zea mays PE=2 SV=1 45 0.002 tr|B4G0N4|B4G0N4_MAIZE Putative uncharacterized protein OS=Zea m... 45 0.002 tr|Q75IY1|Q75IY1_ORYSJ Os03g0413100 protein OS=Oryza sativa subs... 40 0.058 tr|Q75IY0|Q75IY0_ORYSJ Putative ACT domain containing protein, A... 40 0.058 tr|A3AJ25|A3AJ25_ORYSJ Putative uncharacterized protein OS=Oryza... 40 0.058 tr|A2XHY2|A2XHY2_ORYSI Putative uncharacterized protein OS=Oryza... 40 0.058 tr|A7P5V9|A7P5V9_VITVI Chromosome chr4 scaffold_6, whole genome ... 39 0.13 tr|A7P2B7|A7P2B7_VITVI Chromosome chr1 scaffold_5, whole genome ... 39 0.13 tr|A5BD32|A5BD32_VITVI Putative uncharacterized protein OS=Vitis... 39 0.13 tr|A9NND6|A9NND6_PICSI Putative uncharacterized protein OS=Picea... 38 0.22 tr|A7QUU8|A7QUU8_VITVI Chromosome chr1 scaffold_180, whole genom... 38 0.22 tr|A5C2B4|A5C2B4_VITVI Putative uncharacterized protein OS=Vitis... 38 0.22 tr|A5AWQ7|A5AWQ7_VITVI Putative uncharacterized protein (Chromos... 38 0.22 tr|A7P9X8|A7P9X8_VITVI Chromosome chr14 scaffold_9, whole genome... 38 0.29 tr|A7PHK3|A7PHK3_VITVI Chromosome chr17 scaffold_16, whole genom... 37 0.50 tr|A5B662|A5B662_VITVI Putative uncharacterized protein OS=Vitis... 37 0.50 tr|Q9LNA5|Q9LNA5_ARATH F5O11.14 (At1g12420) (Putative uncharacte... 37 0.65 tr|Q9LQB5|Q9LQB5_ARATH F4N2.2 OS=Arabidopsis thaliana PE=4 SV=1 36 0.84 tr|Q8LJW3|Q8LJW3_ARATH ACR4 (At1g69040) OS=Arabidopsis thaliana ... 36 0.84 tr|Q8GWT8|Q8GWT8_ARATH Putative uncharacterized protein At1g6904... 36 0.84 tr|Q7XVN5|Q7XVN5_ORYSJ Os04g0391500 protein OS=Oryza sativa subs... 36 0.84 tr|Q3ECF7|Q3ECF7_ARATH Uncharacterized protein At1g69040.2 OS=Ar... 36 0.84 tr|Q01LC6|Q01LC6_ORYSA OSIGBa0145N07.1 protein OS=Oryza sativa G... 36 0.84 tr|B6SV85|B6SV85_MAIZE ACR4 OS=Zea mays PE=2 SV=1 36 0.84 tr|A7QK86|A7QK86_VITVI Chromosome chr2 scaffold_112, whole genom... 36 0.84 tr|A5ADW0|A5ADW0_VITVI Putative uncharacterized protein OS=Vitis... 36 0.84 tr|A3ATA6|A3ATA6_ORYSJ Putative uncharacterized protein OS=Oryza... 36 0.84 tr|A2XSU7|A2XSU7_ORYSI Putative uncharacterized protein OS=Oryza... 36 0.84 tr|Q9ZPQ8|Q9ZPQ8_ARATH Putative uridylyl transferase OS=Arabidop... 36 1.1
>tr|B7ZYV0|B7ZYV0_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 440
Score = 44.7 bits (104), Expect = 0.002 Identities = 20/36 (55%), Positives = 26/36 (72%) Frame = -1
Query: 330 YYIFHIDRCTLHSACERRRLI*CLHTAVERRLFEKL 223 YYI HID C ++S ER+R+I CL A+ERR+ E L Sbjct: 296 YYIRHIDGCPVNSEAERKRIIQCLEAAIERRVSEGL 331
>tr|B6SL14|B6SL14_MAIZE ACR4 OS=Zea mays PE=2 SV=1 Length = 458
Score = 44.7 bits (104), Expect = 0.002 Identities = 20/36 (55%), Positives = 26/36 (72%) Frame = -1
Query: 330 YYIFHIDRCTLHSACERRRLI*CLHTAVERRLFEKL 223 YYI HID C ++S ER+R+I CL A+ERR+ E L Sbjct: 314 YYIRHIDGCPVNSEAERKRIIQCLEAAIERRVSEGL 349
>tr|B4G0N4|B4G0N4_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 458
Score = 44.7 bits (104), Expect = 0.002 Identities = 20/36 (55%), Positives = 26/36 (72%) Frame = -1
Query: 330 YYIFHIDRCTLHSACERRRLI*CLHTAVERRLFEKL 223 YYI HID C ++S ER+R+I CL A+ERR+ E L Sbjct: 314 YYIRHIDGCPVNSEAERKRIIQCLEAAIERRVSEGL 349
>tr|Q75IY1|Q75IY1_ORYSJ Os03g0413100 protein OS=Oryza sativa subsp. japonica GN=OsACR7 PE=2 SV=1 Length = 452
Score = 40.0 bits (92), Expect = 0.058 Identities = 19/36 (52%), Positives = 25/36 (69%) Frame = -1
Query: 330 YYIFHIDRCTLHSACERRRLI*CLHTAVERRLFEKL 223 YYI HID ++S ER+R+I CL A+ERR+ E L Sbjct: 307 YYIRHIDGSPVNSEAERQRVIQCLEAAIERRVSEGL 342
>tr|Q75IY0|Q75IY0_ORYSJ Putative ACT domain containing protein, ACR4, with alternative splicing forms (ACT domain containing protein, putative, expressed) OS=Oryza sativa subsp. japonica GN=LOC_Os03g29980 PE=4 SV=1 Length = 374
Score = 40.0 bits (92), Expect = 0.058 Identities = 19/36 (52%), Positives = 25/36 (69%) Frame = -1
Query: 330 YYIFHIDRCTLHSACERRRLI*CLHTAVERRLFEKL 223 YYI HID ++S ER+R+I CL A+ERR+ E L Sbjct: 229 YYIRHIDGSPVNSEAERQRVIQCLEAAIERRVSEGL 264
>tr|A3AJ25|A3AJ25_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_010797 PE=4 SV=1 Length = 455
Score = 40.0 bits (92), Expect = 0.058 Identities = 19/36 (52%), Positives = 25/36 (69%) Frame = -1
Query: 330 YYIFHIDRCTLHSACERRRLI*CLHTAVERRLFEKL 223 YYI HID ++S ER+R+I CL A+ERR+ E L Sbjct: 310 YYIRHIDGSPVNSEAERQRVIQCLEAAIERRVSEGL 345
>tr|A2XHY2|A2XHY2_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_12028 PE=4 SV=1 Length = 455
Score = 40.0 bits (92), Expect = 0.058 Identities = 19/36 (52%), Positives = 25/36 (69%) Frame = -1
Query: 330 YYIFHIDRCTLHSACERRRLI*CLHTAVERRLFEKL 223 YYI HID ++S ER+R+I CL A+ERR+ E L Sbjct: 310 YYIRHIDGSPVNSEAERQRVIQCLEAAIERRVSEGL 345
>tr|A7P5V9|A7P5V9_VITVI Chromosome chr4 scaffold_6, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00032680001 PE=4 SV=1 Length = 481
Score = 38.9 bits (89), Expect = 0.13 Identities = 16/34 (47%), Positives = 24/34 (70%) Frame = -1
Query: 330 YYIFHIDRCTLHSACERRRLI*CLHTAVERRLFE 229 Y+I HID CT++S E+ ++ CL A+ERR+ E Sbjct: 326 YFIRHIDGCTVNSEGEKEHVVKCLEAAIERRVCE 359
>tr|A7P2B7|A7P2B7_VITVI Chromosome chr1 scaffold_5, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00029995001 PE=4 SV=1 Length = 432
Score = 38.9 bits (89), Expect = 0.13 Identities = 19/36 (52%), Positives = 24/36 (66%) Frame = -1
Query: 330 YYIFHIDRCTLHSACERRRLI*CLHTAVERRLFEKL 223 YYI HID + S ER+R+I CL A+ERR+ E L Sbjct: 298 YYIRHIDGSPVKSDAERQRVIQCLEAAIERRVSEGL 333
>tr|A5BD32|A5BD32_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_015490 PE=4 SV=1 Length = 416
Score = 38.9 bits (89), Expect = 0.13 Identities = 19/36 (52%), Positives = 24/36 (66%) Frame = -1
Query: 330 YYIFHIDRCTLHSACERRRLI*CLHTAVERRLFEKL 223 YYI HID + S ER+R+I CL A+ERR+ E L Sbjct: 282 YYIRHIDGSPVKSDAERQRVIQCLEAAIERRVSEGL 317
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