BP917580
Clone id YMU001_000102_F07
Library
Length 288
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000102_F07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
AGCAGCAAGGGTTTCTGGATGAGAGTTTTCTATCAGCAGTCACTGCACAGATACGACAAG
CACGAGAAGGTGGGGATAAACCAGGTCTGGTTGCTATTCTCCAGAAAGTGCTACAGCTAT
ATGCAGCACAAATGTTGTCAAAAAGAAGCTATGCATTGAAAGATGGGCAAGTAGTTCAGG
CAGAGGAGTTCTTGGAAACAATAATTTCAGCTGATGAGGAGAACTGGGAAGGTTTGATAA
GGAGTGGCCTTGTCTATGGAGGTGGCCAGATTGAGCCAGAAGAGCTGT
■■Homology search results ■■ -
sp_hit_id Q3A245
Definition sp|Q3A245|SECA_PELCD Protein translocase subunit secA OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1)
Align length 70
Score (bit) 30.0
E-value 3.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917580|Adiantum capillus-veneris mRNA, clone:
YMU001_000102_F07.
(288 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q3A245|SECA_PELCD Protein translocase subunit secA OS=Pelobac... 30 3.7
sp|Q5LWE5|GLND_SILPO [Protein-PII] uridylyltransferase OS=Silici... 30 3.7
sp|Q1D1H8|SECA_MYXXD Protein translocase subunit secA OS=Myxococ... 30 4.8
sp|P54371|Y104_SYNY3 Uncharacterized protein slr0104 OS=Synechoc... 29 6.3
sp|Q8C0Q2|ZHX3_MOUSE Zinc fingers and homeoboxes protein 3 OS=Mu... 29 8.2
sp|Q8BHJ5|TBL1R_MOUSE F-box-like/WD repeat-containing protein TB... 29 8.3
sp|Q9BZK7|TBL1R_HUMAN F-box-like/WD repeat-containing protein TB... 29 8.3
sp|Q6GPC6|TB1RB_XENLA F-box-like/WD repeat-containing protein TB... 29 8.3
sp|Q7SZM9|TB1RA_XENLA F-box-like/WD repeat-containing protein TB... 29 8.3

>sp|Q3A245|SECA_PELCD Protein translocase subunit secA OS=Pelobacter
carbinolicus (strain DSM 2380 / Gra Bd 1) GN=secA PE=3
SV=1
Length = 896

Score = 30.0 bits (66), Expect = 3.7
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Frame = +3

Query: 81 PGLVAILQKVLQLYAAQMLSKRS--YALKDGQVVQAEEFLETIISADEENW-EGLIRSGL 251
PG + +L V Q A L KR Y +KDG+V+ +EF ++ W +GL ++
Sbjct: 301 PGNIELLHHVNQALKAHALFKRDVDYVVKDGEVMIVDEFTGRLMPG--RRWSDGLHQAVE 358

Query: 252 VYGGGQIEPE 281
G +IE E
Sbjct: 359 AKEGVKIESE 368


>sp|Q5LWE5|GLND_SILPO [Protein-PII] uridylyltransferase
OS=Silicibacter pomeroyi GN=glnD PE=3 SV=1
Length = 908

Score = 30.0 bits (66), Expect = 3.7
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +3

Query: 75 DKPGLVAILQKVLQLYAAQMLSKRSYALKDGQVVQA 182
D PG+ + + L L A ++ RSY KDG V A
Sbjct: 726 DHPGIFSRMAGALALVGANVVDARSYTTKDGYVTDA 761


>sp|Q1D1H8|SECA_MYXXD Protein translocase subunit secA OS=Myxococcus
xanthus (strain DK 1622) GN=secA PE=3 SV=1
Length = 940

Score = 29.6 bits (65), Expect = 4.8
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +3

Query: 81 PGLVAILQKVLQLYAAQMLSKRS--YALKDGQVVQAEEF 191
PG + +L V Q A L KR Y +KDG+VV +EF
Sbjct: 283 PGEIEMLHHVDQALRAHTLYKRDKDYVVKDGEVVIVDEF 321


>sp|P54371|Y104_SYNY3 Uncharacterized protein slr0104
OS=Synechocystis sp. (strain PCC 6803) GN=slr0104 PE=4
SV=1
Length = 811

Score = 29.3 bits (64), Expect = 6.3
Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Frame = +3

Query: 141 KRSYALKDGQVVQAEEFLETI---ISADEENWEGLIRSGLVYGGGQI 272
K S ++ G+V+ E+F+ +S + NW+GL+R+ + GG I
Sbjct: 345 KNSVIVRAGEVITQEQFVLLDGYGLSQRQVNWQGLLRTAGLVGGALI 391


>sp|Q8C0Q2|ZHX3_MOUSE Zinc fingers and homeoboxes protein 3 OS=Mus
musculus GN=Zhx3 PE=2 SV=2
Length = 951

Score = 28.9 bits (63), Expect = 8.2
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = -1

Query: 279 LAQSGHLHRQGHSLSNLPSSPHQLKLLFPRTPLPELLAHLSMHSFFLTTF 130
L Q +H Q H+ LP+S K++ P + +P A + +SF +F
Sbjct: 270 LQQQPPVHAQHHTHQPLPTSKTLPKVMIPLSSIPTYNAAMDSNSFLKNSF 319


>sp|Q8BHJ5|TBL1R_MOUSE F-box-like/WD repeat-containing protein
TBL1XR1 OS=Mus musculus GN=Tbl1xr1 PE=2 SV=1
Length = 514

Score = 28.9 bits (63), Expect = 8.3
Identities = 16/71 (22%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Frame = +3

Query: 3 QQGFLDESFLSAVTAQIRQAREGG---DKPGLVAILQKVLQLYAAQMLSKRSYALKDGQV 173
+ GF +F + + I Q+ G L++I+QK LQ A++ L DG+
Sbjct: 18 ESGFSHSAFTFGIESHISQSNINGALVPPAALISIIQKGLQYVEAEVSINEDGTLFDGRP 77

Query: 174 VQAEEFLETII 206
+++ ++ ++
Sbjct: 78 IESLSLIDAVM 88


>sp|Q9BZK7|TBL1R_HUMAN F-box-like/WD repeat-containing protein
TBL1XR1 OS=Homo sapiens GN=TBL1XR1 PE=1 SV=1
Length = 514

Score = 28.9 bits (63), Expect = 8.3
Identities = 16/71 (22%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Frame = +3

Query: 3 QQGFLDESFLSAVTAQIRQAREGG---DKPGLVAILQKVLQLYAAQMLSKRSYALKDGQV 173
+ GF +F + + I Q+ G L++I+QK LQ A++ L DG+
Sbjct: 18 ESGFSHSAFTFGIESHISQSNINGALVPPAALISIIQKGLQYVEAEVSINEDGTLFDGRP 77

Query: 174 VQAEEFLETII 206
+++ ++ ++
Sbjct: 78 IESLSLIDAVM 88


>sp|Q6GPC6|TB1RB_XENLA F-box-like/WD repeat-containing protein
TBL1XR1-B OS=Xenopus laevis GN=tbl1xr1-B PE=2 SV=1
Length = 522

Score = 28.9 bits (63), Expect = 8.3
Identities = 16/71 (22%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Frame = +3

Query: 3 QQGFLDESFLSAVTAQIRQAREGG---DKPGLVAILQKVLQLYAAQMLSKRSYALKDGQV 173
+ GF +F + + I Q+ G L++I+QK LQ A++ L DG+
Sbjct: 18 ESGFSHSAFTFGIESHISQSNINGALVPPAALISIIQKGLQYVEAEVSINEDGTLFDGRP 77

Query: 174 VQAEEFLETII 206
+++ ++ ++
Sbjct: 78 IESLSLIDAVM 88


>sp|Q7SZM9|TB1RA_XENLA F-box-like/WD repeat-containing protein
TBL1XR1-A OS=Xenopus laevis GN=tbl1xr1-A PE=1 SV=1
Length = 519

Score = 28.9 bits (63), Expect = 8.3
Identities = 16/71 (22%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Frame = +3

Query: 3 QQGFLDESFLSAVTAQIRQAREGG---DKPGLVAILQKVLQLYAAQMLSKRSYALKDGQV 173
+ GF +F + + I Q+ G L++I+QK LQ A++ L DG+
Sbjct: 18 ESGFSHSAFTFGIESHISQSNINGALAPPAALISIIQKGLQYVEAEVSINEDGTLFDGRP 77

Query: 174 VQAEEFLETII 206
+++ ++ ++
Sbjct: 78 IESLSLIDAVM 88


tr_hit_id A9P2A8
Definition tr|A9P2A8|A9P2A8_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 95
Score (bit) 131.0
E-value 2.0e-29
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917580|Adiantum capillus-veneris mRNA, clone:
YMU001_000102_F07.
(288 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9P2A8|A9P2A8_PICSI Putative uncharacterized protein OS=Picea... 131 2e-29
tr|A9TNR5|A9TNR5_PHYPA Predicted protein OS=Physcomitrella paten... 125 1e-27
tr|Q94AU3|Q94AU3_ARATH Putative uncharacterized protein At2g2138... 115 1e-24
tr|A8MQF3|A8MQF3_ARATH Uncharacterized protein At2g21385.2 OS=Ar... 115 1e-24
tr|B6U2T7|B6U2T7_MAIZE Putative uncharacterized protein OS=Zea m... 112 7e-24
tr|B4F8J2|B4F8J2_MAIZE Putative uncharacterized protein OS=Zea m... 112 7e-24
tr|Q652K7|Q652K7_ORYSJ Os09g0531100 protein OS=Oryza sativa subs... 111 2e-23
tr|A3C0W4|A3C0W4_ORYSJ Putative uncharacterized protein OS=Oryza... 111 2e-23
tr|A2Z3D8|A2Z3D8_ORYSI Putative uncharacterized protein OS=Oryza... 111 2e-23
tr|B8BTY4|B8BTY4_THAPS Predicted protein OS=Thalassiosira pseudo... 44 0.004
tr|B7G3H8|B7G3H8_PHATR Predicted protein OS=Phaeodactylum tricor... 42 0.012
tr|A8JEU3|A8JEU3_CHLRE Predicted protein OS=Chlamydomonas reinha... 42 0.012
tr|Q00YQ5|Q00YQ5_OSTTA Chromosome 11 contig 1, DNA sequence OS=O... 40 0.045
tr|A4S4X6|A4S4X6_OSTLU Predicted protein OS=Ostreococcus lucimar... 39 0.099
tr|B6MD95|B6MD95_BRAFL Putative uncharacterized protein OS=Branc... 37 0.38
tr|B4V8U5|B4V8U5_9ACTO Putative uncharacterized protein OS=Strep... 37 0.49
tr|Q0PE53|Q0PE53_PRUAV NBS-containing resistance-like protein (F... 36 1.1
tr|Q0PE47|Q0PE47_PRUAV NBS-containing resistance-like protein (F... 36 1.1
tr|Q000E3|Q000E3_PRUAV NBS-containing resistance-like protein (F... 36 1.1
tr|B4FHG8|B4FHG8_MAIZE Putative uncharacterized protein OS=Zea m... 29 2.8
tr|Q0PE52|Q0PE52_PRUAV NBS-containing resistance-like protein (F... 34 4.2
tr|Q0GE78|Q0GE78_9ROSA NBS-containing resistance-like protein (F... 34 4.2
tr|Q0GE74|Q0GE74_9ROSA NBS-containing resistance-like protein (F... 34 4.2
tr|Q000G8|Q000G8_PRUAV NBS-containing resistance-like protein (F... 34 4.2
tr|Q000E1|Q000E1_PRUAV NBS-containing resistance-like protein (F... 34 4.2
tr|A6UYV6|A6UYV6_PSEA7 Probable biotin-requiring enzyme OS=Pseud... 33 7.1
tr|A9BVW8|A9BVW8_DELAS Transcriptional regulator, GntR family wi... 33 9.3
tr|Q0PDU0|Q0PDU0_9ROSA NBS-containing resistance-like protein (F... 33 9.3
tr|Q000D8|Q000D8_PRUAV NBS-containing resistance-like protein (F... 33 9.3
tr|Q9I625|Q9I625_PSEAE Probable biotin-requiring enzyme OS=Pseud... 33 9.3

>tr|A9P2A8|A9P2A8_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 342

Score = 131 bits (329), Expect = 2e-29
Identities = 65/95 (68%), Positives = 77/95 (81%)
Frame = +3

Query: 3 QQGFLDESFLSAVTAQIRQAREGGDKPGLVAILQKVLQLYAAQMLSKRSYALKDGQVVQA 182
Q+G LDE FLS V AQ+RQA GDKPGLVAILQKVLQ YA+++LS+RSYA KDGQV++A
Sbjct: 199 QEGQLDEGFLSEVNAQLRQAISDGDKPGLVAILQKVLQFYASKVLSRRSYAFKDGQVIKA 258

Query: 183 EEFLETIISADEENWEGLIRSGLVYGGGQIEPEEL 287
EEFLETII DEE W L+ +GL YGGG+I E+L
Sbjct: 259 EEFLETIIKGDEEGWNELLINGLTYGGGEITLEDL 293


>tr|A9TNR5|A9TNR5_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_148298 PE=4 SV=1
Length = 283

Score = 125 bits (313), Expect = 1e-27
Identities = 60/93 (64%), Positives = 75/93 (80%)
Frame = +3

Query: 6 QGFLDESFLSAVTAQIRQAREGGDKPGLVAILQKVLQLYAAQMLSKRSYALKDGQVVQAE 185
+ FLDESFLS V+AQ+RQA+E DKPGLVAILQKVLQLYAA +LSKRSYA+KDG V +AE
Sbjct: 140 ENFLDESFLSEVSAQLRQAKEDKDKPGLVAILQKVLQLYAACLLSKRSYAMKDGVVDKAE 199

Query: 186 EFLETIISADEENWEGLIRSGLVYGGGQIEPEE 284
E LE ++ DE+ W L+R+G YGGG++ E+
Sbjct: 200 ELLEKVMDVDEDKWNDLLRNGFTYGGGEVPSED 232


>tr|Q94AU3|Q94AU3_ARATH Putative uncharacterized protein At2g21385
(Putative uncharacterized protein At2g21385/F3K23.12)
(Expressed protein) OS=Arabidopsis thaliana
GN=At2g21385/F3K23.12 PE=2 SV=1
Length = 330

Score = 115 bits (288), Expect = 1e-24
Identities = 59/95 (62%), Positives = 71/95 (74%)
Frame = +3

Query: 3 QQGFLDESFLSAVTAQIRQAREGGDKPGLVAILQKVLQLYAAQMLSKRSYALKDGQVVQA 182
++G LDE FLS V AQ+RQA+E DKPGL+A+LQKVLQLY+A +LSKRSYA K +VV+A
Sbjct: 191 KEGQLDEGFLSEVNAQLRQAKEDKDKPGLLAMLQKVLQLYSATILSKRSYAKKGNEVVKA 250

Query: 183 EEFLETIISADEENWEGLIRSGLVYGGGQIEPEEL 287
E FLET+I A EE W L GL G G I P+EL
Sbjct: 251 EHFLETLIKAPEEQWNKLFVDGLTIGKGDITPDEL 285


>tr|A8MQF3|A8MQF3_ARATH Uncharacterized protein At2g21385.2
OS=Arabidopsis thaliana GN=At2g21385 PE=4 SV=1
Length = 252

Score = 115 bits (288), Expect = 1e-24
Identities = 59/95 (62%), Positives = 71/95 (74%)
Frame = +3

Query: 3 QQGFLDESFLSAVTAQIRQAREGGDKPGLVAILQKVLQLYAAQMLSKRSYALKDGQVVQA 182
++G LDE FLS V AQ+RQA+E DKPGL+A+LQKVLQLY+A +LSKRSYA K +VV+A
Sbjct: 113 KEGQLDEGFLSEVNAQLRQAKEDKDKPGLLAMLQKVLQLYSATILSKRSYAKKGNEVVKA 172

Query: 183 EEFLETIISADEENWEGLIRSGLVYGGGQIEPEEL 287
E FLET+I A EE W L GL G G I P+EL
Sbjct: 173 EHFLETLIKAPEEQWNKLFVDGLTIGKGDITPDEL 207


>tr|B6U2T7|B6U2T7_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 326

Score = 112 bits (281), Expect = 7e-24
Identities = 55/95 (57%), Positives = 70/95 (73%)
Frame = +3

Query: 3 QQGFLDESFLSAVTAQIRQAREGGDKPGLVAILQKVLQLYAAQMLSKRSYALKDGQVVQA 182
Q+G LDE FLS V+AQ+RQA++ GDKPGL A+LQKVLQLYA++ L KRSYA K GQVV
Sbjct: 184 QEGQLDEGFLSEVSAQLRQAKQDGDKPGLQAMLQKVLQLYASKSLQKRSYAYKGGQVVVP 243

Query: 183 EEFLETIISADEENWEGLIRSGLVYGGGQIEPEEL 287
E+FLE +I A E W ++ GL G G + P++L
Sbjct: 244 EKFLECVIQAPENEWNKVLLDGLTVGKGDVSPDDL 278


>tr|B4F8J2|B4F8J2_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 326

Score = 112 bits (281), Expect = 7e-24
Identities = 55/95 (57%), Positives = 70/95 (73%)
Frame = +3

Query: 3 QQGFLDESFLSAVTAQIRQAREGGDKPGLVAILQKVLQLYAAQMLSKRSYALKDGQVVQA 182
Q+G LDE FLS V+AQ+RQA++ GDKPGL A+LQKVLQLYA++ L KRSYA K GQVV
Sbjct: 184 QEGQLDEGFLSEVSAQLRQAKQDGDKPGLQAMLQKVLQLYASKSLQKRSYAYKGGQVVVP 243

Query: 183 EEFLETIISADEENWEGLIRSGLVYGGGQIEPEEL 287
E+FLE +I A E W ++ GL G G + P++L
Sbjct: 244 EKFLECVIQAPENEWNKVLLDGLTVGKGDVSPDDL 278


>tr|Q652K7|Q652K7_ORYSJ Os09g0531100 protein OS=Oryza sativa subsp.
japonica GN=OJ1254_E07.7 PE=4 SV=1
Length = 329

Score = 111 bits (278), Expect = 2e-23
Identities = 54/94 (57%), Positives = 67/94 (71%)
Frame = +3

Query: 3 QQGFLDESFLSAVTAQIRQAREGGDKPGLVAILQKVLQLYAAQMLSKRSYALKDGQVVQA 182
++G LDE FLS V AQ+RQA++ GDKPGL A+LQKVLQLYA+ L KRSYA K G+V+
Sbjct: 187 KEGQLDEGFLSEVNAQLRQAKQDGDKPGLQAMLQKVLQLYASNFLQKRSYAYKGGEVIVP 246

Query: 183 EEFLETIISADEENWEGLIRSGLVYGGGQIEPEE 284
E FLE++I A E W L+ GL G G + PEE
Sbjct: 247 ESFLESVIKAPENEWNKLLLDGLTVGKGNVSPEE 280


>tr|A3C0W4|A3C0W4_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_028936 PE=4 SV=1
Length = 296

Score = 111 bits (278), Expect = 2e-23
Identities = 54/94 (57%), Positives = 67/94 (71%)
Frame = +3

Query: 3 QQGFLDESFLSAVTAQIRQAREGGDKPGLVAILQKVLQLYAAQMLSKRSYALKDGQVVQA 182
++G LDE FLS V AQ+RQA++ GDKPGL A+LQKVLQLYA+ L KRSYA K G+V+
Sbjct: 154 KEGQLDEGFLSEVNAQLRQAKQDGDKPGLQAMLQKVLQLYASNFLQKRSYAYKGGEVIVP 213

Query: 183 EEFLETIISADEENWEGLIRSGLVYGGGQIEPEE 284
E FLE++I A E W L+ GL G G + PEE
Sbjct: 214 ESFLESVIKAPENEWNKLLLDGLTVGKGNVSPEE 247


>tr|A2Z3D8|A2Z3D8_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_32141 PE=4 SV=1
Length = 287

Score = 111 bits (278), Expect = 2e-23
Identities = 54/94 (57%), Positives = 67/94 (71%)
Frame = +3

Query: 3 QQGFLDESFLSAVTAQIRQAREGGDKPGLVAILQKVLQLYAAQMLSKRSYALKDGQVVQA 182
++G LDE FLS V AQ+RQA++ GDKPGL A+LQKVLQLYA+ L KRSYA K G+V+
Sbjct: 154 KEGQLDEGFLSEVNAQLRQAKQDGDKPGLQAMLQKVLQLYASNFLQKRSYAYKGGEVIVP 213

Query: 183 EEFLETIISADEENWEGLIRSGLVYGGGQIEPEE 284
E FLE++I A E W L+ GL G G + PEE
Sbjct: 214 ESFLESVIKAPENEWNKLLLDGLTVGKGNVSPEE 247


>tr|B8BTY4|B8BTY4_THAPS Predicted protein OS=Thalassiosira
pseudonana CCMP1335 GN=THAPSDRAFT_2291 PE=4 SV=1
Length = 341

Score = 43.9 bits (102), Expect = 0.004
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 26/119 (21%)
Frame = +3

Query: 9 GFLDESFLSAVTAQIRQAREGGDKPGLVAILQKVLQLYAAQMLSKRSYALK--------- 161
G L+E FLS V A + +A + G G+V I+Q VLQ+YA ++S+ + L+
Sbjct: 185 GDLNEGFLSTVDAWMNKAHQDG-MDGMVTIMQNVLQIYAGLVISRARFQLQANVGAAISG 243

Query: 162 ----------------DGQV-VQAEEFLETIISADEENWEGLIRSGLVYGGGQIEPEEL 287
D V A + LE ++ AD + W+ IR G+ Q ++L
Sbjct: 244 EDQSAADAVAAAASEGDSPVNTAASDLLEQLLRADTDAWDYEIRKGVNGEDSQCTKDQL 302