BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917585|Adiantum capillus-veneris mRNA, clone:
YMU001_000102_G03.
         (456 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9HDB5|NRX3B_HUMAN Neurexin-3-beta OS=Homo sapiens GN=NRXN3 P...    30   3.8  
sp|Q3KQE5|T38BA_XENLA Trimeric intracellular cation channel type...    30   4.9  
sp|O13652|SFI1_SCHPO Protein sfi1 OS=Schizosaccharomyces pombe G...    30   4.9  
sp|Q9AY27|YS1_MAIZE Iron-phytosiderophore transporter yellow str...    30   6.4  
sp|Q5H9K5|ZMAT1_HUMAN Zinc finger matrin-type protein 1 OS=Homo ...    29   8.4  
sp|Q9HFE8|TRA1_SCHPO Transcription-associated protein 1 OS=Schiz...    29   8.4  
sp|Q28FA9|TM38B_XENTR Trimeric intracellular cation channel type...    29   8.4  
sp|Q6GN30|T38BB_XENLA Trimeric intracellular cation channel type...    29   8.4  
sp|Q2LR98|SYY_SYNAS Tyrosyl-tRNA synthetase OS=Syntrophus acidit...    29   8.6  

>sp|Q9HDB5|NRX3B_HUMAN Neurexin-3-beta OS=Homo sapiens GN=NRXN3 PE=1
           SV=4
          Length = 637

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
 Frame = -3

Query: 193 LLANNWPKNDLHISNSTSSCPLSPIQE--HFHQSKHFDV 83
           ++++ W  +++  S+STSS P S  Q   HFH SKH  V
Sbjct: 29  IVSSVWSSSNVASSSSTSSSPGSHSQHEHHFHGSKHHSV 67


>sp|Q3KQE5|T38BA_XENLA Trimeric intracellular cation channel type
           B-A OS=Xenopus laevis GN=tmem38b-A PE=2 SV=1
          Length = 284

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 19/56 (33%), Positives = 26/56 (46%)
 Frame = +2

Query: 59  SGSNHLRSHIKVLALVKVLLYWAQRTAGG*IRDVEIILWPVVGQEKAQGLPSSADV 226
           SG  H  SH K   LV + + WA+   GG I + E ++  V   E  + L  S  V
Sbjct: 127 SGVTHAHSHYKDALLVMITIGWARGAGGGLISNFEQLVRGVWKPESNEFLKMSYPV 182


>sp|O13652|SFI1_SCHPO Protein sfi1 OS=Schizosaccharomyces pombe
           GN=sfi1 PE=2 SV=3
          Length = 840

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 15/60 (25%), Positives = 31/60 (51%)
 Frame = +3

Query: 108 KCSCIGLKGQLEVEFEMWRSFFGQLLAKRKRKDYLVQQMSAQ*KRWMLTHGSTTWHNSIS 287
           K S + +    + E+ + R  F   ++KR+R + L+Q+ +   +  +L H   TW  ++S
Sbjct: 266 KWSALTVNWNRKHEYMLKRRVFTNWMSKRRRNESLIQKANVFFQHSVLAHSFKTWKANLS 325


>sp|Q9AY27|YS1_MAIZE Iron-phytosiderophore transporter yellow stripe
           1 OS=Zea mays GN=YS1 PE=2 SV=1
          Length = 682

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
 Frame = +2

Query: 62  GSNHLRSH-IKVLALVKVLLYWAQRTAGG*IRDVEIILWPVVGQEKAQGLPSSADVSSMK 238
           G+  + SH + +  L+  +L W              ILWP++ ++K +  P++   SSMK
Sbjct: 280 GAGMICSHLVNISTLLGAILSWG-------------ILWPLISKQKGEWYPANIPESSMK 326

Query: 239 AM 244
           ++
Sbjct: 327 SL 328


>sp|Q5H9K5|ZMAT1_HUMAN Zinc finger matrin-type protein 1 OS=Homo
           sapiens GN=ZMAT1 PE=2 SV=1
          Length = 638

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 16/60 (26%), Positives = 30/60 (50%)
 Frame = +3

Query: 171 FGQLLAKRKRKDYLVQQMSAQ*KRWMLTHGSTTWHNSISEPKSYFLRVMKCYGLWLKTSF 350
           F    ++  ++ Y +  + +Q  +W+ TH   T+ +   E + Y ++V K  GL  KT F
Sbjct: 356 FSHEASQTYQRPYHISPVESQLPQWLPTHSKRTYDSFQDELEDY-IKVQKARGLEPKTCF 414


>sp|Q9HFE8|TRA1_SCHPO Transcription-associated protein 1
            OS=Schizosaccharomyces pombe GN=tra1 PE=2 SV=1
          Length = 3699

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = +3

Query: 123  GLKGQLEVEFEMWRSFFGQLLAKRKRKDYLVQQMS 227
            GLK  +  +   WRS+F +LL+K  +K YL Q  S
Sbjct: 3264 GLKSYI-FKLRKWRSYFERLLSKVPKKQYLEQYSS 3297


>sp|Q28FA9|TM38B_XENTR Trimeric intracellular cation channel type B
           OS=Xenopus tropicalis GN=tmem38b PE=2 SV=1
          Length = 284

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 19/56 (33%), Positives = 26/56 (46%)
 Frame = +2

Query: 59  SGSNHLRSHIKVLALVKVLLYWAQRTAGG*IRDVEIILWPVVGQEKAQGLPSSADV 226
           SG  H  SH K   LV + + WA+   GG I + E ++  V   E  + L  S  V
Sbjct: 127 SGVAHAHSHYKDAMLVMITIGWARGAGGGLISNFEQLVRGVWKPESNEFLKMSYPV 182


>sp|Q6GN30|T38BB_XENLA Trimeric intracellular cation channel type
           B-B OS=Xenopus laevis GN=tmem38b-B PE=2 SV=1
          Length = 284

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 19/56 (33%), Positives = 26/56 (46%)
 Frame = +2

Query: 59  SGSNHLRSHIKVLALVKVLLYWAQRTAGG*IRDVEIILWPVVGQEKAQGLPSSADV 226
           SG  H  SH K   LV + + WA+   GG I + E ++  V   E  + L  S  V
Sbjct: 127 SGITHAHSHYKDAWLVMITIGWARGAGGGLISNFEQLVRGVWKPESNEFLKMSYPV 182


>sp|Q2LR98|SYY_SYNAS Tyrosyl-tRNA synthetase OS=Syntrophus
           aciditrophicus (strain SB) GN=tyrS PE=3 SV=1
          Length = 428

 Score = 29.3 bits (64), Expect = 8.6
 Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
 Frame = -1

Query: 267 LSTHGSTSIAFIELTSAELGSPCAFSWPTTGQRMISTSRIQPPAVL----*AQYKSTFTK 100
           L  HG TSIA +   +A +G P   S  T  +++++  +I+  A       A+Y S   K
Sbjct: 60  LQRHGHTSIALVGGGTALIGDP---SGKTEMRQILTREKIELNATCMRRQFARYLSFEDK 116

Query: 99  ASTLMCDLKWFEPLPKIADLA*VKLHFPAQQVL 1
            + ++ +  W   L  I+ L  +  HF   ++L
Sbjct: 117 KAMMINNADWLTKLNYISFLRDIGRHFSVNKML 149

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917585|Adiantum capillus-veneris mRNA, clone:
YMU001_000102_G03.
         (456 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q0WNB7|Q0WNB7_ARATH Putative uncharacterized protein At3g5048...    33   5.4  
tr|A2EG76|A2EG76_TRIVA Helicase, putative OS=Trichomonas vaginal...    33   9.3  

>tr|Q0WNB7|Q0WNB7_ARATH Putative uncharacterized protein At3g50480
           OS=Arabidopsis thaliana GN=At3g50480 PE=2 SV=1
          Length = 200

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 17/61 (27%), Positives = 30/61 (49%)
 Frame = +2

Query: 83  HIKVLALVKVLLYWAQRTAGG*IRDVEIILWPVVGQEKAQGLPSSADVSSMKAMDVDPWV 262
           +IK L  +++ L W  R       ++++  W  + + KA  +    D+  MKA+ VD W 
Sbjct: 105 YIKKLESIELELVWVAR-------EIQVHQWTDIKEMKAIQVHQWTDIKEMKAIQVDQWT 157

Query: 263 D 265
           D
Sbjct: 158 D 158


>tr|A2EG76|A2EG76_TRIVA Helicase, putative OS=Trichomonas vaginalis
           G3 GN=TVAG_352740 PE=4 SV=1
          Length = 292

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 9/64 (14%)
 Frame = +3

Query: 18  GNEALLMPNLLSL---------GVVQTI*DHTSKCLLW*KCSCIGLKGQLEVEFEMWRSF 170
           G + LLM +LL L          V+Q +    + C  W  CS + LK Q+  + E W SF
Sbjct: 158 GKKVLLMGDLLQLPPVVPDYGESVLQRL---ITSCYWWKDCSFVSLKKQMRTKNEKWSSF 214

Query: 171 FGQL 182
             ++
Sbjct: 215 LSEV 218