BP917586
Clone id YMU001_000102_G04
Library
Length 457
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000102_G04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CTGTAGGGAACGATGTAATGTGGCAAGTCGGTCCTTAGAGTAACCAAGCGTTTACTGAGG
AAAACTTCACCTTTATCTGTCATCAGTCCATTTGAGGCTCGTTTTCCTTTGACATTATTG
CGCTCCTTGATCAAGTTTTCTAAATTACCATAAACTTGTAAGAGTTTAACAGCAGTTTAT
TCTCCAATTCCTGATACACCTGGAATATTATCTATTTTGCCTCCCATAAGTGCAAGTATA
TCCACAAATTGAGATGGACTTAGATCCCCAAATCTGGCATGAAATTCCTCCAATCCAAAA
GAGACAATCCCTGAAACCGCGGGGTAACAAAACGCAAGAGACGCAAGGAAGGAGAAATAA
GTTGGAAGAAATCCTTATCTGGCGACAGCACTCGAACCTTAGCGTCTGCCTTGATAGCGC
TCACGGCTAGGGTTGCTATCACATCATCAGCCTCAAC
■■Homology search results ■■ -
sp_hit_id Q04957
Definition sp|Q04957|DPO1_BACCA DNA polymerase I OS=Bacillus caldotenax
Align length 99
Score (bit) 78.6
E-value 2.0e-19
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917586|Adiantum capillus-veneris mRNA, clone:
YMU001_000102_G04.
(457 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q04957|DPO1_BACCA DNA polymerase I OS=Bacillus caldotenax GN=... 79 2e-19
sp|P52026|DPO1_BACST DNA polymerase I OS=Bacillus stearothermoph... 76 2e-18
sp|O34996|DPO1_BACSU DNA polymerase I OS=Bacillus subtilis GN=po... 75 5e-18
sp|O52225|DPO1_THEFI DNA polymerase I, thermostable OS=Thermus f... 67 5e-18
sp|P59200|DPO1_STRR6 DNA polymerase I OS=Streptococcus pneumonia... 78 9e-17
sp|P59199|DPO1_STRPN DNA polymerase I OS=Streptococcus pneumonia... 78 9e-17
sp|Q9S1G2|DPO1_RHILE DNA polymerase I OS=Rhizobium leguminosarum... 65 2e-16
sp|P00582|DPO1_ECOLI DNA polymerase I OS=Escherichia coli (strai... 62 2e-16
sp|Q9F173|DPO1_SALTY DNA polymerase I OS=Salmonella typhimurium ... 63 3e-16
sp|P30313|DPO1F_THETH DNA polymerase I, thermostable OS=Thermus ... 62 3e-16
sp|Q55971|DPO1_SYNY3 DNA polymerase I OS=Synechocystis sp. (stra... 57 8e-16
sp|P19821|DPO1_THEAQ DNA polymerase I, thermostable OS=Thermus a... 61 1e-15
sp|O67550|EX53_AQUAE 5'-3' exonuclease OS=Aquifex aeolicus GN=aq... 61 6e-15
sp|O32801|DPO1_LACLM DNA polymerase I OS=Lactococcus lactis subs... 79 7e-15
sp|Q9CDS1|DPO1_LACLA DNA polymerase I OS=Lactococcus lactis subs... 79 1e-14
sp|P43741|DPO1_HAEIN DNA polymerase I OS=Haemophilus influenzae ... 59 2e-14
sp|A8H6V6|XNI_SHEPA Uncharacterized exonuclease xni OS=Shewanell... 58 2e-14
sp|P46835|DPO1_MYCLE DNA polymerase I OS=Mycobacterium leprae GN... 62 6e-14
sp|Q9HT80|DPO1_PSEAE DNA polymerase I OS=Pseudomonas aeruginosa ... 58 6e-14
sp|P74933|DPO1_TREPA DNA polymerase I OS=Treponema pallidum GN=p... 60 8e-14
sp|A0KHE3|XNI_AERHH Uncharacterized exonuclease xni OS=Aeromonas... 56 9e-14
sp|P0A550|DPO1_MYCTU DNA polymerase I OS=Mycobacterium tuberculo... 60 1e-13
sp|P0A551|DPO1_MYCBO DNA polymerase I OS=Mycobacterium bovis GN=... 60 1e-13
sp|P57506|EX53_BUCAI 5'-3' exonuclease OS=Buchnera aphidicola su... 59 1e-13
sp|B0TPG7|XNI_SHEHH Uncharacterized exonuclease xni OS=Shewanell... 60 1e-13
sp|Q89AD1|EX53_BUCBP 5'-3' exonuclease OS=Buchnera aphidicola su... 61 4e-13
sp|Q8K9D0|EX53_BUCAP 5'-3' exonuclease OS=Buchnera aphidicola su... 59 4e-13
sp|A3QGM4|XNI_SHELP Uncharacterized exonuclease xni OS=Shewanell... 52 4e-13
sp|Q47YA8|XNI_COLP3 Uncharacterized exonuclease xni OS=Colwellia... 52 5e-13
sp|O08307|DPO1_CHLAA DNA polymerase I OS=Chloroflexus aurantiacu... 61 7e-13

>sp|Q04957|DPO1_BACCA DNA polymerase I OS=Bacillus caldotenax
GN=polA PE=1 SV=1
Length = 877

Score = 78.6 bits (192), Expect(2) = 2e-19
Identities = 41/99 (41%), Positives = 60/99 (60%)
Frame = -3

Query: 317 VSGIVSFGLEEFHARFGDLSPSQFVDILALMGGKIDNIPGVSGIGE*TAVKLLQVYGNLE 138
++ I + E ++G L+P Q VD+ LMG K DNIPGV GIGE TAVKLL+ +G +E
Sbjct: 154 ITDIEPYTPEAVREKYG-LTPEQIVDLKGLMGDKSDNIPGVPGIGEKTAVKLLRQFGTVE 212

Query: 137 NLIKERNNVKGKRASNGLMTDKGEVFLSKRLVTLRTDLP 21
N++ + +KG++ L + LSK+L +R D P
Sbjct: 213 NVLASIDEIKGEKLKETLRQHREMALLSKKLAAIRRDAP 251



Score = 37.0 bits (84), Expect(2) = 2e-19
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = -1

Query: 454 EADDVIATLAVSAIKADAKVRVLSPDKDFFQLISP 350
EADD+I TLA A + +V+V+S D+D QL SP
Sbjct: 109 EADDIIGTLAARAEQEGFEVKVISGDRDLTQLASP 143


>sp|P52026|DPO1_BACST DNA polymerase I OS=Bacillus
stearothermophilus GN=polA PE=1 SV=2
Length = 876

Score = 75.9 bits (185), Expect(2) = 2e-18
Identities = 41/99 (41%), Positives = 60/99 (60%)
Frame = -3

Query: 317 VSGIVSFGLEEFHARFGDLSPSQFVDILALMGGKIDNIPGVSGIGE*TAVKLLQVYGNLE 138
++ I S+ E ++G L+P Q VD+ LMG K DNIPGV GIGE TAVKLL+ +G +E
Sbjct: 154 ITDIESYTPETVVEKYG-LTPEQIVDLKGLMGDKSDNIPGVPGIGEKTAVKLLKQFGTVE 212

Query: 137 NLIKERNNVKGKRASNGLMTDKGEVFLSKRLVTLRTDLP 21
N++ + +KG++ L + LSK+L + D P
Sbjct: 213 NVLASIDEIKGEKLKENLRQYRDLALLSKQLAAICRDAP 251



Score = 36.2 bits (82), Expect(2) = 2e-18
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = -1

Query: 454 EADDVIATLAVSAIKADAKVRVLSPDKDFFQLISPSL 344
EADD+I T+A A + V+V+S D+D QL SP +
Sbjct: 109 EADDIIGTMAARAEREGFAVKVISGDRDLTQLASPQV 145


>sp|O34996|DPO1_BACSU DNA polymerase I OS=Bacillus subtilis GN=polA
PE=3 SV=1
Length = 880

Score = 74.7 bits (182), Expect(2) = 5e-18
Identities = 38/107 (35%), Positives = 62/107 (57%)
Frame = -3

Query: 341 SLAFCYPAVSGIVSFGLEEFHARFGDLSPSQFVDILALMGGKIDNIPGVSGIGE*TAVKL 162
++A ++ + + E ++G L+P Q +D+ LMG DNIPGV G+GE TA+KL
Sbjct: 148 TVAITRKGITDVEFYTPEHVKEKYG-LTPEQIIDMKGLMGDSSDNIPGVPGVGEKTAIKL 206

Query: 161 LQVYGNLENLIKERNNVKGKRASNGLMTDKGEVFLSKRLVTLRTDLP 21
L+ + ++E L++ + V GK+ L K + +SK L T+ TD P
Sbjct: 207 LKQFDSVEKLLESIDEVSGKKLKEKLEEFKDQALMSKELATIMTDAP 253



Score = 35.8 bits (81), Expect(2) = 5e-18
Identities = 19/32 (59%), Positives = 22/32 (68%)
Frame = -1

Query: 454 EADDVIATLAVSAIKADAKVRVLSPDKDFFQL 359
EADD+I TLA SA K +V+V S DKD QL
Sbjct: 111 EADDIIGTLAKSAEKDGFEVKVFSGDKDLTQL 142


>sp|O52225|DPO1_THEFI DNA polymerase I, thermostable OS=Thermus
filiformis GN=polA PE=1 SV=1
Length = 833

Score = 67.0 bits (162), Expect(2) = 5e-18
Identities = 35/79 (44%), Positives = 50/79 (63%)
Frame = -3

Query: 257 PSQFVDILALMGGKIDNIPGVSGIGE*TAVKLLQVYGNLENLIKERNNVKGKRASNGLMT 78
P ++VD AL G + DNIPGV+GIGE TA++LL +G++ENL+K + VK +
Sbjct: 175 PERWVDFRALTGDRSDNIPGVAGIGEKTALRLLAEWGSVENLLKNLDRVKPDSLRRKIEA 234

Query: 77 DKGEVFLSKRLVTLRTDLP 21
++ LS L +RTDLP
Sbjct: 235 HLEDLHLSLDLARIRTDLP 253



Score = 43.5 bits (101), Expect(2) = 5e-18
Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 4/50 (8%)
Frame = -1

Query: 454 EADDVIATLAVSAIKADAKVRVLSPDKDFFQLISPSLRLL----RFVTPR 317
EADDV+ TLA A + +VR+L+ D+DFFQL+S + +L VTP+
Sbjct: 116 EADDVLGTLAKKAEREGMEVRILTGDRDFFQLLSEKVSVLLPDGTLVTPK 165


>sp|P59200|DPO1_STRR6 DNA polymerase I OS=Streptococcus pneumoniae
(strain ATCC BAA-255 / R6) GN=polA PE=3 SV=1
Length = 877

Score = 78.2 bits (191), Expect(2) = 9e-17
Identities = 42/99 (42%), Positives = 60/99 (60%), Gaps = 7/99 (7%)
Frame = -3

Query: 296 GLEEFHARFGD-------LSPSQFVDILALMGGKIDNIPGVSGIGE*TAVKLLQVYGNLE 138
G+ EF A D L+P+QF+D+ ALMG K DNIPGV+ +GE T +KLL +G+LE
Sbjct: 158 GVAEFEAFTPDYLMEEMGLTPAQFIDLKALMGDKSDNIPGVTKVGEKTGIKLLLEHGSLE 217

Query: 137 NLIKERNNVKGKRASNGLMTDKGEVFLSKRLVTLRTDLP 21
+ + + +K + L+ DK + FLSK L T+ T P
Sbjct: 218 GIYENIDGMKTSKMKENLINDKEQAFLSKTLATIDTKAP 256



Score = 28.1 bits (61), Expect(2) = 9e-17
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -1

Query: 454 EADDVIATLAVSAIKADAKVRVLSPDKDFFQL 359
EADD+I TL A + + ++S DKD QL
Sbjct: 114 EADDIIGTLDKLAEQDGFDITIVSGDKDLIQL 145


>sp|P59199|DPO1_STRPN DNA polymerase I OS=Streptococcus pneumoniae
GN=polA PE=3 SV=1
Length = 877

Score = 78.2 bits (191), Expect(2) = 9e-17
Identities = 42/99 (42%), Positives = 60/99 (60%), Gaps = 7/99 (7%)
Frame = -3

Query: 296 GLEEFHARFGD-------LSPSQFVDILALMGGKIDNIPGVSGIGE*TAVKLLQVYGNLE 138
G+ EF A D L+P+QF+D+ ALMG K DNIPGV+ +GE T +KLL +G+LE
Sbjct: 158 GVAEFEAFTPDYLMEEMGLTPAQFIDLKALMGDKSDNIPGVTKVGEKTGIKLLLEHGSLE 217

Query: 137 NLIKERNNVKGKRASNGLMTDKGEVFLSKRLVTLRTDLP 21
+ + + +K + L+ DK + FLSK L T+ T P
Sbjct: 218 GIYENIDGMKTSKMKENLINDKEQAFLSKTLATIDTKAP 256



Score = 28.1 bits (61), Expect(2) = 9e-17
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -1

Query: 454 EADDVIATLAVSAIKADAKVRVLSPDKDFFQL 359
EADD+I TL A + + ++S DKD QL
Sbjct: 114 EADDIIGTLDKLAEQDGFDITIVSGDKDLIQL 145


>sp|Q9S1G2|DPO1_RHILE DNA polymerase I OS=Rhizobium leguminosarum
GN=polA PE=3 SV=1
Length = 1016

Score = 65.1 bits (157), Expect(2) = 2e-16
Identities = 31/92 (33%), Positives = 56/92 (60%)
Frame = -3

Query: 296 GLEEFHARFGDLSPSQFVDILALMGGKIDNIPGVSGIGE*TAVKLLQVYGNLENLIKERN 117
G+ + ++G + P + +D+ A+ G +DN+PG+ GIG TA +LL+ YG+L+ L++
Sbjct: 184 GIPDVIEKWG-VPPEKMIDLQAMTGDSVDNVPGIPGIGPKTAAQLLEEYGDLDTLLERAT 242

Query: 116 NVKGKRASNGLMTDKGEVFLSKRLVTLRTDLP 21
+K + ++ + LS+ LV LRTD+P
Sbjct: 243 EIKQVKRRETILANIDMARLSRDLVRLRTDVP 274



Score = 40.4 bits (93), Expect(2) = 2e-16
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = -1

Query: 454 EADDVIATLAVSAIKADAKVRVLSPDKDFFQLISPSLRL 338
EADD+IAT A A A V ++S DKD QL+SP++ +
Sbjct: 136 EADDIIATYARQAEATGADVTIVSSDKDLMQLVSPNVHM 174


>sp|P00582|DPO1_ECOLI DNA polymerase I OS=Escherichia coli (strain
K12) GN=polA PE=1 SV=1
Length = 928

Score = 62.0 bits (149), Expect(2) = 2e-16
Identities = 39/97 (40%), Positives = 53/97 (54%), Gaps = 6/97 (6%)
Frame = -3

Query: 296 GLEEFHARFGDLSPSQFVDILALMGGKIDNIPGVSGIGE*TAVKLLQVYGNLENLIKERN 117
G EE ++G + P +D LALMG DNIPGV G+GE TA LLQ G L+ L E
Sbjct: 161 GPEEVVNKYG-VPPELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPE 219

Query: 116 NVKG------KRASNGLMTDKGEVFLSKRLVTLRTDL 24
+ G K + L +K +LS +L T++TD+
Sbjct: 220 KIAGLSFRGAKTMAAKLEQNKEVAYLSYQLATIKTDV 256



Score = 43.1 bits (100), Expect(2) = 2e-16
Identities = 23/50 (46%), Positives = 31/50 (62%)
Frame = -1

Query: 457 VEADDVIATLAVSAIKADAKVRVLSPDKDFFQLISPSLRLLRFVTPRFQG 308
VEADDVI TLA A KA V + + DKD QL++P++ L+ +T G
Sbjct: 112 VEADDVIGTLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILG 161


>sp|Q9F173|DPO1_SALTY DNA polymerase I OS=Salmonella typhimurium
GN=polA PE=3 SV=2
Length = 928

Score = 62.8 bits (151), Expect(2) = 3e-16
Identities = 38/97 (39%), Positives = 53/97 (54%), Gaps = 6/97 (6%)
Frame = -3

Query: 296 GLEEFHARFGDLSPSQFVDILALMGGKIDNIPGVSGIGE*TAVKLLQVYGNLENLIKERN 117
G +E ++G + P +D LALMG DNIPGV G+GE TA LLQ G L+ L E
Sbjct: 161 GPDEVVNKYG-VPPELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPE 219

Query: 116 NVKG------KRASNGLMTDKGEVFLSKRLVTLRTDL 24
+ G K + L +K +LS +L T++TD+
Sbjct: 220 KIAGLTFRGAKTMAGKLAQNKDVAYLSYKLATIKTDV 256



Score = 41.6 bits (96), Expect(2) = 3e-16
Identities = 22/50 (44%), Positives = 30/50 (60%)
Frame = -1

Query: 457 VEADDVIATLAVSAIKADAKVRVLSPDKDFFQLISPSLRLLRFVTPRFQG 308
VEADDVI TLA A K V + + DKD QL++P++ L+ +T G
Sbjct: 112 VEADDVIGTLAREAEKVGRPVLISTGDKDMAQLVTPNITLINTMTNTILG 161


>sp|P30313|DPO1F_THETH DNA polymerase I, thermostable OS=Thermus
thermophilus GN=polA PE=1 SV=1
Length = 831

Score = 62.4 bits (150), Expect(2) = 3e-16
Identities = 36/81 (44%), Positives = 48/81 (59%)
Frame = -3

Query: 263 LSPSQFVDILALMGGKIDNIPGVSGIGE*TAVKLLQVYGNLENLIKERNNVKGKRASNGL 84
L P Q+VD AL G DNIPGV GIGE TA +L++ +G+LENL + + VK L
Sbjct: 173 LRPEQWVDYRALAGDPSDNIPGVKGIGEKTAQRLIREWGSLENLFQHLDQVKPSLREK-L 231

Query: 83 MTDKGEVFLSKRLVTLRTDLP 21
+ LS++L + TDLP
Sbjct: 232 QAGMEALALSRKLSQVHTDLP 252



Score = 42.0 bits (97), Expect(2) = 3e-16
Identities = 20/40 (50%), Positives = 29/40 (72%)
Frame = -1

Query: 454 EADDVIATLAVSAIKADAKVRVLSPDKDFFQLISPSLRLL 335
EADDV+ATLA A K +VR+L+ D+D +QL+S + +L
Sbjct: 116 EADDVLATLAKRAEKEGYEVRILTADRDLYQLLSERIAIL 155


tr_hit_id A7QAR5
Definition tr|A7QAR5|A7QAR5_VITVI Chromosome chr5 scaffold_72, whole genome shotgun sequence OS=Vitis vinifera
Align length 102
Score (bit) 101.0
E-value 8.0e-34
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917586|Adiantum capillus-veneris mRNA, clone:
YMU001_000102_G04.
(457 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7QAR5|A7QAR5_VITVI Chromosome chr5 scaffold_72, whole genome... 101 8e-34
tr|B8LLQ0|B8LLQ0_PICSI Putative uncharacterized protein OS=Picea... 99 1e-32
tr|Q9ZIG3|Q9ZIG3_RHOSI DNA polymerase type I OS=Rhodothermus sp.... 105 3e-28
tr|Q9X582|Q9X582_RHOMR DNA polymerase I OS=Rhodothermus marinus ... 105 3e-28
tr|A9SI76|A9SI76_PHYPA Predicted protein (Fragment) OS=Physcomit... 126 6e-28
tr|A5BRP5|A5BRP5_VITVI Putative uncharacterized protein OS=Vitis... 79 6e-27
tr|B4FJZ1|B4FJZ1_MAIZE DNA polymerase I OS=Zea mays PE=2 SV=1 118 1e-25
tr|B6U5W0|B6U5W0_MAIZE DNA polymerase I OS=Zea mays PE=2 SV=1 117 4e-25
tr|Q8H850|Q8H850_ORYSJ Putative uncharacterized protein OJ1626B0... 115 1e-24
tr|Q10PN9|Q10PN9_ORYSJ Os03g0227300 protein OS=Oryza sativa subs... 115 1e-24
tr|Q10PN8|Q10PN8_ORYSJ 5'-3' exonuclease, N-terminal resolvase-l... 115 1e-24
tr|B8AJK9|B8AJK9_ORYSI Putative uncharacterized protein OS=Oryza... 115 1e-24
tr|Q2S226|Q2S226_SALRD DNA polymerase I OS=Salinibacter ruber (s... 89 3e-23
tr|Q3EAL4|Q3EAL4_ARATH Uncharacterized protein At3g52050.1 (At3g... 107 4e-22
tr|A8MQG8|A8MQG8_ARATH Uncharacterized protein At3g52050.3 OS=Ar... 107 4e-22
tr|Q016X6|Q016X6_OSTTA DNA polymerase type I (ISS) OS=Ostreococc... 76 6e-20
tr|A7GTN3|A7GTN3_BACCN DNA polymerase I OS=Bacillus cereus subsp... 79 2e-19
tr|A4AMM5|A4AMM5_9FLAO DNA polymerase I OS=Flavobacteriales bact... 71 8e-19
tr|A4BY69|A4BY69_9FLAO DNA polymerase I OS=Polaribacter irgensii... 74 1e-18
tr|A9DPB4|A9DPB4_9FLAO DNA polymerase I OS=Kordia algicida OT-1 ... 75 1e-18
tr|B6VAJ0|B6VAJ0_9DEIN PolI OS=Thermus sp. NMX2.A1 GN=polI PE=4 ... 73 1e-18
tr|A5FJH6|A5FJH6_FLAJ1 DNA polymerase I OS=Flavobacterium johnso... 74 2e-18
tr|Q1VTJ2|Q1VTJ2_9FLAO DNA polymerase I OS=Psychroflexus torquis... 72 2e-18
tr|Q5KWC1|Q5KWC1_GEOKA DNA polymerase I OS=Geobacillus kaustophi... 79 2e-18
tr|Q6X9S1|Q6X9S1_BACCL DNA polymerase I OS=Bacillus caldolyticus... 79 2e-18
tr|B7YAF2|B7YAF2_9BACI DNA polymerase I OS=Geobacillus sp. Y412M... 79 2e-18
tr|A4UU11|A4UU11_BACCL DNA polymerase I OS=Bacillus caldolyticus... 79 2e-18
tr|A2TF40|A2TF40_9BACI DNA polymerase I OS=Bacillus sp. G(2006) ... 79 2e-18
tr|Q8EPE5|Q8EPE5_OCEIH DNA polymerase I OS=Oceanobacillus iheyen... 76 2e-18
tr|Q281W0|Q281W0_9BACI DNA polymerase I OS=Geobacillus sp. MKK-2... 78 2e-18

>tr|A7QAR5|A7QAR5_VITVI Chromosome chr5 scaffold_72, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00034655001
PE=4 SV=1
Length = 394

Score = 101 bits (252), Expect(2) = 8e-34
Identities = 49/102 (48%), Positives = 71/102 (69%)
Frame = -3

Query: 308 IVSFGLEEFHARFGDLSPSQFVDILALMGGKIDNIPGVSGIGE*TAVKLLQVYGNLENLI 129
+ SFG+E+F R+G+L PSQFVD+++L+G K DNIPGV GIG AV+L+ +G LENL+
Sbjct: 243 MTSFGMEDFAKRYGNLEPSQFVDVISLVGDKSDNIPGVEGIGNVHAVQLITKFGTLENLL 302

Query: 128 KERNNVKGKRASNGLMTDKGEVFLSKRLVTLRTDLPHYIVPY 3
+ + V+ +R L++ + LSK L LR DLP Y+VP+
Sbjct: 303 QCVDQVQEERIRKALISGADQAVLSKNLALLRCDLPFYMVPF 344



Score = 65.5 bits (158), Expect(2) = 8e-34
Identities = 33/47 (70%), Positives = 40/47 (85%)
Frame = -1

Query: 457 VEADDVIATLAVSAIKADAKVRVLSPDKDFFQLISPSLRLLRFVTPR 317
VEADDVI TL+V ++ A KVRV+SPDKDFFQ++SPSLRLLR + PR
Sbjct: 194 VEADDVIGTLSVRSVDAGYKVRVVSPDKDFFQILSPSLRLLR-IAPR 239


>tr|B8LLQ0|B8LLQ0_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 400

Score = 98.6 bits (244), Expect(2) = 1e-32
Identities = 49/104 (47%), Positives = 68/104 (65%)
Frame = -3

Query: 314 SGIVSFGLEEFHARFGDLSPSQFVDILALMGGKIDNIPGVSGIGE*TAVKLLQVYGNLEN 135
S I SFG+E+F ++GDL PSQ VD++AL G D IPGV GIG+ A+KL+ +G+LEN
Sbjct: 287 SRIASFGVEQFAEKYGDLKPSQIVDVMALAGDNADFIPGVHGIGDMNALKLIIKFGSLEN 346

Query: 134 LIKERNNVKGKRASNGLMTDKGEVFLSKRLVTLRTDLPHYIVPY 3
L+ + V L+ D G+ LSK L TLR +LP+ +VP+
Sbjct: 347 LLANLDRVPDGAIRKALLFDDGQALLSKELATLRCNLPYCMVPF 390



Score = 64.3 bits (155), Expect(2) = 1e-32
Identities = 31/42 (73%), Positives = 36/42 (85%)
Frame = -1

Query: 457 VEADDVIATLAVSAIKADAKVRVLSPDKDFFQLISPSLRLLR 332
VEADDVI TLAV+ + A KVRV+SPDKDFFQ++ PSLRLLR
Sbjct: 240 VEADDVIGTLAVNGVAAGLKVRVVSPDKDFFQILCPSLRLLR 281


>tr|Q9ZIG3|Q9ZIG3_RHOSI DNA polymerase type I OS=Rhodothermus sp.
(strain ITI 518) GN=polA PE=3 SV=1
Length = 924

Score = 105 bits (261), Expect(2) = 3e-28
Identities = 52/91 (57%), Positives = 66/91 (72%)
Frame = -3

Query: 293 LEEFHARFGDLSPSQFVDILALMGGKIDNIPGVSGIGE*TAVKLLQVYGNLENLIKERNN 114
+E F +G L P QF+D+LALMG DN+PGV GIGE TAV+L+Q YG++ENL+
Sbjct: 165 IETFRETYG-LEPHQFIDVLALMGDPSDNVPGVPGIGEKTAVQLIQQYGSVENLLAHAEE 223

Query: 113 VKGKRASNGLMTDKGEVFLSKRLVTLRTDLP 21
VKGKRA GL+ + E LSKRLVT+RTD+P
Sbjct: 224 VKGKRAREGLLNHREEALLSKRLVTIRTDVP 254



Score = 43.5 bits (101), Expect(2) = 3e-28
Identities = 22/42 (52%), Positives = 28/42 (66%)
Frame = -1

Query: 457 VEADDVIATLAVSAIKADAKVRVLSPDKDFFQLISPSLRLLR 332
VEADDVI TLA A V ++SPDKDF QL+SP + + +
Sbjct: 111 VEADDVIGTLARRAEAHGIDVVIVSPDKDFLQLLSPRISIYK 152


>tr|Q9X582|Q9X582_RHOMR DNA polymerase I OS=Rhodothermus marinus
GN=polA PE=3 SV=1
Length = 924

Score = 105 bits (261), Expect(2) = 3e-28
Identities = 52/91 (57%), Positives = 66/91 (72%)
Frame = -3

Query: 293 LEEFHARFGDLSPSQFVDILALMGGKIDNIPGVSGIGE*TAVKLLQVYGNLENLIKERNN 114
+E F +G L P QF+D+LALMG DN+PGV GIGE TAV+L+Q YG++ENL+
Sbjct: 165 IETFRETYG-LEPHQFIDVLALMGDPSDNVPGVPGIGEKTAVQLIQQYGSVENLLAHAEE 223

Query: 113 VKGKRASNGLMTDKGEVFLSKRLVTLRTDLP 21
VKGKRA GL+ + E LSKRLVT+RTD+P
Sbjct: 224 VKGKRAREGLLNHREEALLSKRLVTIRTDVP 254



Score = 43.1 bits (100), Expect(2) = 3e-28
Identities = 22/42 (52%), Positives = 28/42 (66%)
Frame = -1

Query: 457 VEADDVIATLAVSAIKADAKVRVLSPDKDFFQLISPSLRLLR 332
VEADDVI TLA A V ++SPDKDF QL+SP + + +
Sbjct: 111 VEADDVIGTLARRAEAHGIDVVIVSPDKDFLQLLSPHVSIYK 152


>tr|A9SI76|A9SI76_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_44265 PE=4 SV=1
Length = 310

Score = 126 bits (316), Expect = 6e-28
Identities = 57/107 (53%), Positives = 83/107 (77%)
Frame = -3

Query: 323 PAVSGIVSFGLEEFHARFGDLSPSQFVDILALMGGKIDNIPGVSGIGE*TAVKLLQVYGN 144
P SGIV FG++EF RFGD+ P Q++++LALMG K+DNIPG+ G+GE TA+KL++ YG
Sbjct: 155 PRGSGIVPFGVKEFQKRFGDIQPWQYLEVLALMGDKVDNIPGLPGVGEVTALKLVKEYGT 214

Query: 143 LENLIKERNNVKGKRASNGLMTDKGEVFLSKRLVTLRTDLPHYIVPY 3
+ENL++ R+ VK KR LM D G + +SK+L++LR DLP++++PY
Sbjct: 215 VENLLENRDKVKLKRPRESLMADDGGILMSKKLLSLRLDLPNHMLPY 261



Score = 64.7 bits (156), Expect = 2e-09
Identities = 38/77 (49%), Positives = 45/77 (58%)
Frame = -1

Query: 457 VEADDVIATLAVSAIKADAKVRVLSPDKDFFQLISPSLRLLRFVTPRFQGLSLLDWRNFM 278
VEADD IA AV A+ A V + SPDKDFFQ+ISP LRLLRFV PR G+ + F
Sbjct: 111 VEADDAIAAFAVRAVDAGMHVSIASPDKDFFQIISPRLRLLRFV-PRGSGIVPFGVKEFQ 169

Query: 277 PDLGI*VHLNLWIYLHL 227
G + W YL +
Sbjct: 170 KRFG---DIQPWQYLEV 183


>tr|A5BRP5|A5BRP5_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_010447 PE=4 SV=1
Length = 734

Score = 78.6 bits (192), Expect(2) = 6e-27
Identities = 49/151 (32%), Positives = 71/151 (47%), Gaps = 49/151 (32%)
Frame = -3

Query: 308 IVSFGLEEFHARFGDLSPSQFVDILALMGGKIDNIPG----------------------- 198
+ SFG+E+F R+G+L PSQFVD+++L+G K DNIPG
Sbjct: 534 MTSFGMEDFAKRYGNLEPSQFVDVISLVGDKSDNIPGSFVLIMVKDPIENIPIEKLVSDI 593

Query: 197 --------------------------VSGIGE*TAVKLLQVYGNLENLIKERNNVKGKRA 96
V GIG AV+L+ +G LENL++ + V+ +R
Sbjct: 594 VVFFFLYCKSEQSDPRILRIVLLGNGVEGIGNVHAVQLITKFGTLENLLQCVDQVQEERI 653

Query: 95 SNGLMTDKGEVFLSKRLVTLRTDLPHYIVPY 3
L++ + LSK L LR DLP Y+VP+
Sbjct: 654 RKALISGADQAVLSKNLALLRCDLPFYMVPF 684



Score = 65.5 bits (158), Expect(2) = 6e-27
Identities = 33/47 (70%), Positives = 40/47 (85%)
Frame = -1

Query: 457 VEADDVIATLAVSAIKADAKVRVLSPDKDFFQLISPSLRLLRFVTPR 317
VEADDVI TL+V ++ A KVRV+SPDKDFFQ++SPSLRLLR + PR
Sbjct: 485 VEADDVIGTLSVRSVDAGYKVRVVSPDKDFFQILSPSLRLLR-IAPR 530


>tr|B4FJZ1|B4FJZ1_MAIZE DNA polymerase I OS=Zea mays PE=2 SV=1
Length = 422

Score = 118 bits (296), Expect = 1e-25
Identities = 56/107 (52%), Positives = 77/107 (71%)
Frame = -3

Query: 323 PAVSGIVSFGLEEFHARFGDLSPSQFVDILALMGGKIDNIPGVSGIGE*TAVKLLQVYGN 144
P SG+VSFG+E+F R+G L PSQFVD++AL G K DNIPGV GIG+ AVKL+ +G+
Sbjct: 267 PRGSGMVSFGVEDFVKRYGPLKPSQFVDVVALSGDKADNIPGVEGIGDINAVKLISKFGS 326

Query: 143 LENLIKERNNVKGKRASNGLMTDKGEVFLSKRLVTLRTDLPHYIVPY 3
L+NL+K + V+ +R L++ + L K L TLR+DLPHY+VP+
Sbjct: 327 LDNLLKSVDEVEDERIKQALISHSEQAILCKNLATLRSDLPHYMVPF 373



Score = 69.7 bits (169), Expect = 7e-11
Identities = 35/64 (54%), Positives = 47/64 (73%)
Frame = -1

Query: 457 VEADDVIATLAVSAIKADAKVRVLSPDKDFFQLISPSLRLLRFVTPRFQGLSLLDWRNFM 278
VEADDVI TLA++++ A KVR++SPDKDFFQ++SPSLRLLR + PR G+ +F+
Sbjct: 223 VEADDVIGTLAINSVSAGYKVRIVSPDKDFFQILSPSLRLLR-IAPRGSGMVSFGVEDFV 281

Query: 277 PDLG 266
G
Sbjct: 282 KRYG 285


>tr|B6U5W0|B6U5W0_MAIZE DNA polymerase I OS=Zea mays PE=2 SV=1
Length = 422

Score = 117 bits (292), Expect = 4e-25
Identities = 56/107 (52%), Positives = 77/107 (71%)
Frame = -3

Query: 323 PAVSGIVSFGLEEFHARFGDLSPSQFVDILALMGGKIDNIPGVSGIGE*TAVKLLQVYGN 144
P SG+VSFG+E+F R+G L PSQFVD++AL G K DNIPGV GIG+ AVKL+ +G+
Sbjct: 267 PRGSGMVSFGVEDFVKRYGPLKPSQFVDVVALSGYKADNIPGVEGIGDINAVKLISKFGS 326

Query: 143 LENLIKERNNVKGKRASNGLMTDKGEVFLSKRLVTLRTDLPHYIVPY 3
L+NL+K + V+ +R L++ + L K L TLR+DLPHY+VP+
Sbjct: 327 LDNLLKSVDEVEDERIKQALISYSEQAILCKNLATLRSDLPHYMVPF 373



Score = 69.7 bits (169), Expect = 7e-11
Identities = 35/64 (54%), Positives = 47/64 (73%)
Frame = -1

Query: 457 VEADDVIATLAVSAIKADAKVRVLSPDKDFFQLISPSLRLLRFVTPRFQGLSLLDWRNFM 278
VEADDVI TLA++++ A KVR++SPDKDFFQ++SPSLRLLR + PR G+ +F+
Sbjct: 223 VEADDVIGTLAINSVSAGYKVRIVSPDKDFFQILSPSLRLLR-IAPRGSGMVSFGVEDFV 281

Query: 277 PDLG 266
G
Sbjct: 282 KRYG 285


>tr|Q8H850|Q8H850_ORYSJ Putative uncharacterized protein OJ1626B05.7
(Putative uncharacterized protein) OS=Oryza sativa
subsp. japonica GN=OJ1626B05.7 PE=4 SV=1
Length = 443

Score = 115 bits (287), Expect = 1e-24
Identities = 56/107 (52%), Positives = 76/107 (71%)
Frame = -3

Query: 323 PAVSGIVSFGLEEFHARFGDLSPSQFVDILALMGGKIDNIPGVSGIGE*TAVKLLQVYGN 144
P SG+VSFG+E+F R+G L PSQFVD++AL G K DNIPGV GIG+ AVKL+ +G+
Sbjct: 288 PRGSGMVSFGVEDFVKRYGALKPSQFVDVVALSGDKADNIPGVEGIGDINAVKLITKFGS 347

Query: 143 LENLIKERNNVKGKRASNGLMTDKGEVFLSKRLVTLRTDLPHYIVPY 3
LENL+K + V+ +R L++ + L K L TLR+DLP Y+VP+
Sbjct: 348 LENLLKSVDEVEEERIKQALISQSEQAMLCKSLATLRSDLPSYMVPF 394



Score = 71.2 bits (173), Expect = 2e-11
Identities = 37/64 (57%), Positives = 47/64 (73%)
Frame = -1

Query: 457 VEADDVIATLAVSAIKADAKVRVLSPDKDFFQLISPSLRLLRFVTPRFQGLSLLDWRNFM 278
VEADDVI TLAVS++ A KVR++SPDKDFFQ++SPSLRLLR + PR G+ +F+
Sbjct: 244 VEADDVIGTLAVSSVSAGYKVRIVSPDKDFFQILSPSLRLLR-IAPRGSGMVSFGVEDFV 302

Query: 277 PDLG 266
G
Sbjct: 303 KRYG 306


>tr|Q10PN9|Q10PN9_ORYSJ Os03g0227300 protein OS=Oryza sativa subsp.
japonica GN=Os03g0227300 PE=2 SV=1
Length = 421

Score = 115 bits (287), Expect = 1e-24
Identities = 56/107 (52%), Positives = 76/107 (71%)
Frame = -3

Query: 323 PAVSGIVSFGLEEFHARFGDLSPSQFVDILALMGGKIDNIPGVSGIGE*TAVKLLQVYGN 144
P SG+VSFG+E+F R+G L PSQFVD++AL G K DNIPGV GIG+ AVKL+ +G+
Sbjct: 266 PRGSGMVSFGVEDFVKRYGALKPSQFVDVVALSGDKADNIPGVEGIGDINAVKLITKFGS 325

Query: 143 LENLIKERNNVKGKRASNGLMTDKGEVFLSKRLVTLRTDLPHYIVPY 3
LENL+K + V+ +R L++ + L K L TLR+DLP Y+VP+
Sbjct: 326 LENLLKSVDEVEEERIKQALISQSEQAMLCKSLATLRSDLPSYMVPF 372



Score = 71.2 bits (173), Expect = 2e-11
Identities = 37/64 (57%), Positives = 47/64 (73%)
Frame = -1

Query: 457 VEADDVIATLAVSAIKADAKVRVLSPDKDFFQLISPSLRLLRFVTPRFQGLSLLDWRNFM 278
VEADDVI TLAVS++ A KVR++SPDKDFFQ++SPSLRLLR + PR G+ +F+
Sbjct: 222 VEADDVIGTLAVSSVSAGYKVRIVSPDKDFFQILSPSLRLLR-IAPRGSGMVSFGVEDFV 280

Query: 277 PDLG 266
G
Sbjct: 281 KRYG 284