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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP917589
Clone id YMU001_000102_G07
Library
Length 332
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000102_G07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CGGACAACTGTCCCTGGGGGACCTAGCGTGGCCTGTAGTACTGTCAACGCTTTGGAGTGG
GATGAGGCATGGTCCAAGAACCCAGATCCTTCATGTCGAGCAGCAATAGGTATACATGAG
GCCTCCTATCAAAAGCCAATTGAAACCCCTGCTGTGGAAAATGTCGGGGCTGGATCCTAT
GGTGAAATGCTGAAATTAGGAGAGGGCATCCCTGCCGTGCCGGTACAGTAATTTTGGGTG
CTGGTTGCTGACAGGCTAGGCTGTCTATGGCCTAAAGCTTTTTTTTTCGAGTGGTCTAAT
TGAAGTATTCTTCACTAACATGATTGGACTAT
■■Homology search results ■■ -
sp_hit_id Q43011
Definition sp|Q43011|ASNS_ORYSJ Asparagine synthetase [glutamine-hydrolyzing] OS=Oryza sativa subsp. japonica
Align length 55
Score (bit) 77.4
E-value 2.0e-14
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917589|Adiantum capillus-veneris mRNA, clone:
YMU001_000102_G07.
         (332 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q43011|ASNS_ORYSJ Asparagine synthetase [glutamine-hydrolyzin...    77   2e-14
sp|P31752|ASNS_ASPOF Asparagine synthetase [glutamine-hydrolyzin...    74   3e-13
sp|P19252|ASNS2_PEA Asparagine synthetase, root [glutamine-hydro...    71   1e-12
sp|P19251|ASNS1_PEA Asparagine synthetase, nodule [glutamine-hyd...    70   3e-12
sp|P49092|ASNS1_LOTJA Asparagine synthetase [glutamine-hydrolyzi...    69   6e-12
sp|O24661|ASNS_TRIVS Asparagine synthetase [glutamine-hydrolyzin...    68   1e-11
sp|P49093|ASNS2_LOTJA Asparagine synthetase [glutamine-hydrolyzi...    67   4e-11
sp|P49091|ASNS_BRAOL Asparagine synthetase [glutamine-hydrolyzin...    65   8e-11
sp|P49078|ASNS_ARATH Asparagine synthetase [glutamine-hydrolyzin...    65   8e-11
sp|P22106|ASNB_ECOLI Asparagine synthetase B [glutamine-hydrolyz...    58   1e-08
sp|P49094|ASNS_MAIZE Asparagine synthetase [glutamine-hydrolyzin...    46   7e-05
sp|Q0VD19|ASM_BOVIN Sphingomyelin phosphodiesterase OS=Bos tauru...    31   2.2  
sp|P17405|ASM_HUMAN Sphingomyelin phosphodiesterase OS=Homo sapi...    30   2.9  
sp|P06487|VGLI_HHV11 Glycoprotein I OS=Human herpesvirus 1 (stra...    29   8.4  
sp|Q7TN88|PK1L2_MOUSE Polycystic kidney disease protein 1-like 2...    29   8.4  
sp|Q1JPJ0|NDOR1_BOVIN NADPH-dependent diflavin oxidoreductase 1 ...    29   8.4  

>sp|Q43011|ASNS_ORYSJ Asparagine synthetase [glutamine-hydrolyzing]
           OS=Oryza sativa subsp. japonica GN=Os06g0265000 PE=2
           SV=3
          Length = 591

 Score = 77.4 bits (189), Expect = 2e-14
 Identities = 35/55 (63%), Positives = 44/55 (80%), Gaps = 1/55 (1%)
 Frame = +1

Query: 1   RTTVPGGPSVACSTVNALEWDEAWSKNPDPSCRAAIGIHEASYQKPIE-TPAVEN 162
           R TVPGGPSVACST  A+EWD AWSKN DPS RAA+G+H+A+Y+  ++ +PA  N
Sbjct: 512 RLTVPGGPSVACSTAKAVEWDAAWSKNLDPSGRAALGVHDAAYEDTLQKSPASAN 566


>sp|P31752|ASNS_ASPOF Asparagine synthetase [glutamine-hydrolyzing]
           OS=Asparagus officinalis PE=2 SV=2
          Length = 590

 Score = 73.6 bits (179), Expect = 3e-13
 Identities = 31/57 (54%), Positives = 40/57 (70%)
 Frame = +1

Query: 1   RTTVPGGPSVACSTVNALEWDEAWSKNPDPSCRAAIGIHEASYQKPIETPAVENVGA 171
           R TVPGGPS+ACST  A+EWD  WS N DPS RAA+G+H+++Y  P+ +      GA
Sbjct: 512 RFTVPGGPSIACSTAKAIEWDARWSNNLDPSGRAALGVHDSAYDPPLPSSISAGKGA 568


>sp|P19252|ASNS2_PEA Asparagine synthetase, root
           [glutamine-hydrolyzing] OS=Pisum sativum GN=AS2 PE=2
           SV=3
          Length = 583

 Score = 71.2 bits (173), Expect = 1e-12
 Identities = 29/44 (65%), Positives = 37/44 (84%)
 Frame = +1

Query: 1   RTTVPGGPSVACSTVNALEWDEAWSKNPDPSCRAAIGIHEASYQ 132
           R TVPGGP+VACST  A+EWD AWS N DPS RAA+G+H+++Y+
Sbjct: 512 RLTVPGGPTVACSTAKAVEWDAAWSNNLDPSGRAALGVHDSAYE 555


>sp|P19251|ASNS1_PEA Asparagine synthetase, nodule
           [glutamine-hydrolyzing] OS=Pisum sativum GN=AS1 PE=2
           SV=3
          Length = 586

 Score = 70.1 bits (170), Expect = 3e-12
 Identities = 30/47 (63%), Positives = 37/47 (78%)
 Frame = +1

Query: 1   RTTVPGGPSVACSTVNALEWDEAWSKNPDPSCRAAIGIHEASYQKPI 141
           R TVPGGPSVACST  A+EWD +WS N DPS RAA+G+H ++Y+  I
Sbjct: 513 RLTVPGGPSVACSTEKAIEWDASWSNNLDPSGRAALGVHVSAYEHQI 559


>sp|P49092|ASNS1_LOTJA Asparagine synthetase [glutamine-hydrolyzing]
           1 OS=Lotus japonicus GN=AS1 PE=2 SV=2
          Length = 586

 Score = 69.3 bits (168), Expect = 6e-12
 Identities = 35/70 (50%), Positives = 44/70 (62%), Gaps = 9/70 (12%)
 Frame = +1

Query: 1   RTTVPGGPSVACSTVNALEWDEAWSKNPDPSCRAAIGIHEASY---------QKPIETPA 153
           R TVPGGP+VACST  A+EWD AWS N DPS RAA+G+H ++Y          KP+E   
Sbjct: 512 RLTVPGGPTVACSTAKAVEWDAAWSNNLDPSGRAALGVHLSAYDDKQNNLINNKPVEFEK 571

Query: 154 VENVGAGSYG 183
           +  + A S G
Sbjct: 572 LIPMEAPSLG 581


>sp|O24661|ASNS_TRIVS Asparagine synthetase [glutamine-hydrolyzing]
           OS=Triphysaria versicolor GN=AS PE=2 SV=3
          Length = 586

 Score = 68.2 bits (165), Expect = 1e-11
 Identities = 28/47 (59%), Positives = 36/47 (76%)
 Frame = +1

Query: 1   RTTVPGGPSVACSTVNALEWDEAWSKNPDPSCRAAIGIHEASYQKPI 141
           + TVPGGPSVACST  A+ WD +WSKN DPS RAA G+H+ +Y+  +
Sbjct: 512 KLTVPGGPSVACSTATAVAWDASWSKNLDPSGRAATGVHDLAYENHV 558


>sp|P49093|ASNS2_LOTJA Asparagine synthetase [glutamine-hydrolyzing]
           2 OS=Lotus japonicus GN=AS2 PE=2 SV=2
          Length = 586

 Score = 66.6 bits (161), Expect = 4e-11
 Identities = 28/55 (50%), Positives = 38/55 (69%)
 Frame = +1

Query: 1   RTTVPGGPSVACSTVNALEWDEAWSKNPDPSCRAAIGIHEASYQKPIETPAVENV 165
           R +VPGG S+ACST  A+EWD AWS N DPS RAA+G+H+++Y   +     + V
Sbjct: 512 RLSVPGGASIACSTEKAIEWDAAWSNNLDPSGRAALGVHDSAYDDQLNKSVSKGV 566


>sp|P49091|ASNS_BRAOL Asparagine synthetase [glutamine-hydrolyzing]
           OS=Brassica oleracea PE=2 SV=2
          Length = 586

 Score = 65.5 bits (158), Expect = 8e-11
 Identities = 28/43 (65%), Positives = 34/43 (79%)
 Frame = +1

Query: 1   RTTVPGGPSVACSTVNALEWDEAWSKNPDPSCRAAIGIHEASY 129
           R TVPGG +VACST  A+EWD +WS N DPS RAAIG+H ++Y
Sbjct: 513 RLTVPGGATVACSTAKAVEWDASWSNNMDPSGRAAIGVHLSAY 555


>sp|P49078|ASNS_ARATH Asparagine synthetase [glutamine-hydrolyzing]
           OS=Arabidopsis thaliana GN=ASN1 PE=2 SV=2
          Length = 584

 Score = 65.5 bits (158), Expect = 8e-11
 Identities = 28/43 (65%), Positives = 34/43 (79%)
 Frame = +1

Query: 1   RTTVPGGPSVACSTVNALEWDEAWSKNPDPSCRAAIGIHEASY 129
           R TVPGG +VACST  A+EWD +WS N DPS RAAIG+H ++Y
Sbjct: 512 RLTVPGGATVACSTAKAVEWDASWSNNMDPSGRAAIGVHLSAY 554


>sp|P22106|ASNB_ECOLI Asparagine synthetase B
           [glutamine-hydrolyzing] OS=Escherichia coli (strain K12)
           GN=asnB PE=1 SV=3
          Length = 554

 Score = 58.2 bits (139), Expect = 1e-08
 Identities = 25/41 (60%), Positives = 34/41 (82%)
 Frame = +1

Query: 10  VPGGPSVACSTVNALEWDEAWSKNPDPSCRAAIGIHEASYQ 132
           VPGGPSVACS+  A+EWDEA+ K  DPS R A+G+H+++Y+
Sbjct: 515 VPGGPSVACSSAKAIEWDEAFKKMDDPSGR-AVGVHQSAYK 554
tr_hit_id A9PGC8
Definition tr|A9PGC8|A9PGC8_POPTR Putative uncharacterized protein OS=Populus trichocarpa
Align length 51
Score (bit) 82.4
E-value 1.0e-14
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917589|Adiantum capillus-veneris mRNA, clone:
YMU001_000102_G07.
         (332 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9PGC8|A9PGC8_POPTR Putative uncharacterized protein OS=Popul...    82   1e-14
tr|B3KYI2|B3KYI2_PHAVU Class II asparagine synthetase OS=Phaseol...    80   7e-14
tr|A5AXY1|A5AXY1_VITVI Putative uncharacterized protein OS=Vitis...    80   7e-14
tr|A7R283|A7R283_VITVI Chromosome undetermined scaffold_408, who...    79   1e-13
tr|Q0DD19|Q0DD19_ORYSJ Os06g0265000 protein OS=Oryza sativa subs...    77   3e-13
tr|B8B0C7|B8B0C7_ORYSI Putative uncharacterized protein OS=Oryza...    77   3e-13
tr|A3BAH2|A3BAH2_ORYSJ Putative uncharacterized protein OS=Oryza...    77   3e-13
tr|B8LLN0|B8LLN0_PICSI Putative uncharacterized protein OS=Picea...    77   4e-13
tr|B4FFJ0|B4FFJ0_MAIZE Asparagine synthetase OS=Zea mays GN=AsnS...    76   1e-12
tr|Q14SM9|Q14SM9_SOYBN Asparagine synthetase, type III OS=Glycin...    74   3e-12
tr|Q9ZST6|Q9ZST6_ARATH Asparagine synthetase OS=Arabidopsis thal...    73   6e-12
tr|Q9SP19|Q9SP19_HELAN Asparagine synthetase OS=Helianthus annuu...    73   6e-12
tr|Q9LV77|Q9LV77_ARATH Asparagine synthetase (AT5g65010/MXK3_25)...    73   6e-12
tr|Q8LJT6|Q8LJT6_STRHE Asparagine synthetase OS=Striga hermonthi...    73   6e-12
tr|Q9MB61|Q9MB61_ASTSI Asparagine synthetase OS=Astragalus sinic...    72   1e-11
tr|Q6HA26|Q6HA26_PINSY Putative asparagine synthetase OS=Pinus s...    72   1e-11
tr|A7NYD2|A7NYD2_VITVI Chromosome chr6 scaffold_3, whole genome ...    72   1e-11
tr|O65329|O65329_ELAUM Asparagine synthetase OS=Elaeagnus umbell...    72   1e-11
tr|Q4AC05|Q4AC05_BRACM 117M18_15 OS=Brassica campestris GN=117M1...    71   2e-11
tr|B6SKQ9|B6SKQ9_MAIZE Asparagine synthetase OS=Zea mays PE=2 SV=1     71   2e-11
tr|B5U8J7|B5U8J7_MAIZE Asparagine synthetase OS=Zea mays GN=AsnS...    71   2e-11
tr|B4FDN7|B4FDN7_MAIZE Putative uncharacterized protein OS=Zea m...    71   2e-11
tr|B3TLZ2|B3TLZ2_ELAGV Asparagine synthetase OS=Elaeis guineensi...    71   2e-11
tr|Q9ZST7|Q9ZST7_ARATH Asparagine synthetase OS=Arabidopsis thal...    71   3e-11
tr|Q9LFU1|Q9LFU1_ARATH Asparagine synthetase ASN3 OS=Arabidopsis...    71   3e-11
tr|Q9LEA1|Q9LEA1_ARATH Asparagine synthetase (ASN3)(Fragment) (F...    71   3e-11
tr|B7U9R8|B7U9R8_CARAS AT5G10240-like protein (Fragment) OS=Card...    71   3e-11
tr|A9TWP8|A9TWP8_PHYPA Predicted protein OS=Physcomitrella paten...    71   3e-11
tr|Q42792|Q42792_SOYBN Asparagine synthetase OS=Glycine max PE=2...    70   4e-11
tr|Q38IA6|Q38IA6_SOYBN Asparagine synthetase OS=Glycine max PE=2...    70   4e-11

>tr|A9PGC8|A9PGC8_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 584

 Score = 82.4 bits (202), Expect = 1e-14
 Identities = 35/51 (68%), Positives = 44/51 (86%)
 Frame = +1

Query: 1   RTTVPGGPSVACSTVNALEWDEAWSKNPDPSCRAAIGIHEASYQKPIETPA 153
           R+TVPGGPSVACST  A+EWD AWSKN DPS RAA+G+HEA+Y++ ++T A
Sbjct: 512 RSTVPGGPSVACSTAKAVEWDAAWSKNLDPSGRAALGVHEAAYEETVDTKA 562


>tr|B3KYI2|B3KYI2_PHAVU Class II asparagine synthetase OS=Phaseolus
           vulgaris GN=as3 PE=2 SV=1
          Length = 570

 Score = 79.7 bits (195), Expect = 7e-14
 Identities = 34/49 (69%), Positives = 41/49 (83%)
 Frame = +1

Query: 1   RTTVPGGPSVACSTVNALEWDEAWSKNPDPSCRAAIGIHEASYQKPIET 147
           R TVPGGPSVACST  A+EWD +WSKN DPS RAA+G+HEASY+  ++T
Sbjct: 512 RATVPGGPSVACSTAKAVEWDASWSKNLDPSGRAALGVHEASYEDVVDT 560


>tr|A5AXY1|A5AXY1_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_034450 PE=4 SV=1
          Length = 636

 Score = 79.7 bits (195), Expect = 7e-14
 Identities = 32/48 (66%), Positives = 41/48 (85%)
 Frame = +1

Query: 1   RTTVPGGPSVACSTVNALEWDEAWSKNPDPSCRAAIGIHEASYQKPIE 144
           R+TVPGGPSVACST  A+EWD AW KNPDPS RAA+G+HE +Y++ ++
Sbjct: 563 RSTVPGGPSVACSTAKAVEWDXAWXKNPDPSGRAALGVHECAYEEAVD 610


>tr|A7R283|A7R283_VITVI Chromosome undetermined scaffold_408, whole
           genome shotgun sequence OS=Vitis vinifera
           GN=GSVIVT00012864001 PE=4 SV=1
          Length = 369

 Score = 79.0 bits (193), Expect = 1e-13
 Identities = 32/48 (66%), Positives = 41/48 (85%)
 Frame = +1

Query: 1   RTTVPGGPSVACSTVNALEWDEAWSKNPDPSCRAAIGIHEASYQKPIE 144
           R+TVPGGPSVACST  A+EWD AW KNPDPS RAA+G+HE +Y++ ++
Sbjct: 296 RSTVPGGPSVACSTAKAVEWDVAWLKNPDPSGRAALGVHECAYEEAVD 343


>tr|Q0DD19|Q0DD19_ORYSJ Os06g0265000 protein OS=Oryza sativa subsp.
           japonica GN=Os06g0265000 PE=2 SV=1
          Length = 591

 Score = 77.4 bits (189), Expect = 3e-13
 Identities = 35/55 (63%), Positives = 44/55 (80%), Gaps = 1/55 (1%)
 Frame = +1

Query: 1   RTTVPGGPSVACSTVNALEWDEAWSKNPDPSCRAAIGIHEASYQKPIE-TPAVEN 162
           R TVPGGPSVACST  A+EWD AWSKN DPS RAA+G+H+A+Y+  ++ +PA  N
Sbjct: 512 RLTVPGGPSVACSTAKAVEWDAAWSKNLDPSGRAALGVHDAAYEDTLQKSPASAN 566


>tr|B8B0C7|B8B0C7_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_22459 PE=4 SV=1
          Length = 591

 Score = 77.4 bits (189), Expect = 3e-13
 Identities = 35/55 (63%), Positives = 44/55 (80%), Gaps = 1/55 (1%)
 Frame = +1

Query: 1   RTTVPGGPSVACSTVNALEWDEAWSKNPDPSCRAAIGIHEASYQKPIE-TPAVEN 162
           R TVPGGPSVACST  A+EWD AWSKN DPS RAA+G+H+A+Y+  ++ +PA  N
Sbjct: 512 RLTVPGGPSVACSTAKAVEWDAAWSKNLDPSGRAALGVHDAAYEDTLQKSPASAN 566


>tr|A3BAH2|A3BAH2_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_020044 PE=4 SV=1
          Length = 530

 Score = 77.4 bits (189), Expect = 3e-13
 Identities = 35/55 (63%), Positives = 44/55 (80%), Gaps = 1/55 (1%)
 Frame = +1

Query: 1   RTTVPGGPSVACSTVNALEWDEAWSKNPDPSCRAAIGIHEASYQKPIE-TPAVEN 162
           R TVPGGPSVACST  A+EWD AWSKN DPS RAA+G+H+A+Y+  ++ +PA  N
Sbjct: 451 RLTVPGGPSVACSTAKAVEWDAAWSKNLDPSGRAALGVHDAAYEDTLQKSPASAN 505


>tr|B8LLN0|B8LLN0_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 590

 Score = 77.0 bits (188), Expect = 4e-13
 Identities = 37/62 (59%), Positives = 43/62 (69%)
 Frame = +1

Query: 1   RTTVPGGPSVACSTVNALEWDEAWSKNPDPSCRAAIGIHEASYQKPIETPAVENVGAGSY 180
           R TVPGGPSVACST  ALEWD AWS+NPDPS RAA+G+H  SY+        EN  A + 
Sbjct: 512 RLTVPGGPSVACSTAKALEWDAAWSRNPDPSGRAALGVHVDSYK--------ENTDASNN 563

Query: 181 GE 186
           G+
Sbjct: 564 GD 565


>tr|B4FFJ0|B4FFJ0_MAIZE Asparagine synthetase OS=Zea mays GN=AsnS1
           PE=2 SV=1
          Length = 591

 Score = 75.9 bits (185), Expect = 1e-12
 Identities = 34/52 (65%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
 Frame = +1

Query: 1   RTTVPGGPSVACSTVNALEWDEAWSKNPDPSCRAAIGIHEASYQKPI-ETPA 153
           R+TVPGGPSVACST  A+EWD +WSKN DPS RAA+G+H+A+Y+    +TPA
Sbjct: 512 RSTVPGGPSVACSTAKAVEWDASWSKNLDPSGRAALGVHDAAYEDTAGKTPA 563


>tr|Q14SM9|Q14SM9_SOYBN Asparagine synthetase, type III OS=Glycine
           max GN=sas3 PE=2 SV=1
          Length = 569

 Score = 74.3 bits (181), Expect = 3e-12
 Identities = 32/43 (74%), Positives = 37/43 (86%)
 Frame = +1

Query: 1   RTTVPGGPSVACSTVNALEWDEAWSKNPDPSCRAAIGIHEASY 129
           + TVPGGPSVACST  A+EWD AWSKN DPS RAA+GIH+A+Y
Sbjct: 512 KATVPGGPSVACSTAKAVEWDAAWSKNLDPSGRAALGIHDAAY 554