BP917593 |
Clone id |
YMU001_000102_G12 |
Library |
YMU01 |
Length |
213 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000102_G12. |
Accession |
BP917593 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
ATGTAGCCTTTGCGCCGGACACTGCCCCGTGTGTGGTCCTCATTTTCCATCCACTGGCGC TGCCCTAGCCGTCATTCCGCCTCCCTCTCCCTTCGCATATCCCACCCTGGCTCCTTCTTG CCAACATTCTTGTCTCCACGTAGCTGTTGCTACAAGCCGCCATCACCGAGCCCCTTAAAA AAAATCCCCAAAAATTTTGTCTTTCCCCCTCCC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9HCM7 |
Definition |
sp|Q9HCM7|AUT2L_HUMAN AUTS2-like protein OS=Homo sapiens |
Align length |
22 |
Score (bit) |
25.0 |
E-value |
5.3 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q19182 |
Definition |
tr|Q19182|Q19182_CAEEL Protein F07H5.8, partially confirmed by transcript evidence OS=Caenorhabditis elegans |
Align length |
51 |
Score (bit) |
37.0 |
E-value |
0.49 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917593|Adiantum capillus-veneris mRNA, clone: YMU001_000102_G12. (199 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q19182|Q19182_CAEEL Protein F07H5.8, partially confirmed by t... 37 0.49 tr|B8GAP1|B8GAP1_9CHLR Putative uncharacterized protein OS=Chlor... 35 2.4 tr|A3BX14|A3BX14_ORYSJ Putative uncharacterized protein OS=Oryza... 35 2.4 tr|B5DHB8|B5DHB8_DROPS GA25280 OS=Drosophila pseudoobscura pseud... 34 3.2 tr|B4GKJ3|B4GKJ3_DROPE GL26098 OS=Drosophila persimilis GN=GL260... 34 3.2 tr|B4GKI5|B4GKI5_DROPE GL26091 OS=Drosophila persimilis GN=GL260... 34 3.2 tr|Q84P66|Q84P66_ORYSJ TF-like protein (Fragment) OS=Oryza sativ... 34 4.1 tr|Q652W3|Q652W3_ORYSJ Putative TF-like protein OS=Oryza sativa ... 34 4.1 tr|Q0DD61|Q0DD61_ORYSJ Os06g0252300 protein (Fragment) OS=Oryza ... 34 4.1 tr|B8B0A0|B8B0A0_ORYSI Putative uncharacterized protein OS=Oryza... 34 4.1 tr|A3BAB5|A3BAB5_ORYSJ Putative uncharacterized protein OS=Oryza... 34 4.1 tr|Q16990|Q16990_ACRDO Mini-collagen OS=Acropora donei PE=4 SV=1 33 5.4 tr|A7UVD1|A7UVD1_ANOGA AGAP012236-PA (Fragment) OS=Anopheles gam... 33 5.4 tr|A8WU59|A8WU59_CAEBR CBR-EHS-1 protein OS=Caenorhabditis brigg... 33 9.2 tr|A0BR77|A0BR77_PARTE Chromosome undetermined scaffold_122, who... 33 9.2
>tr|Q19182|Q19182_CAEEL Protein F07H5.8, partially confirmed by transcript evidence OS=Caenorhabditis elegans GN=F07H5.8 PE=2 SV=2 Length = 872
Score = 37.0 bits (84), Expect = 0.49 Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 3/51 (5%) Frame = +2
Query: 11 CAGHC-PVCGPHFPSTGAALAVI--PPPSPFAYPTLAPSCQHSCLHVAVAT 154 CA C P C P S L V+ PPP+P P P+CQ SC+ T Sbjct: 650 CAPQCQPACDPQCISFTLKLPVMTTPPPTPSCQPQCQPACQPSCMETYTFT 700
>tr|B8GAP1|B8GAP1_9CHLR Putative uncharacterized protein OS=Chloroflexus aggregans DSM 9485 GN=Cagg_1729 PE=4 SV=1 Length = 437
Score = 34.7 bits (78), Expect = 2.4 Identities = 19/46 (41%), Positives = 21/46 (45%) Frame = +2
Query: 38 PHFPSTGAALAVIPPPSPFAYPTLAPSCQHSCLHVAVATSRHHRAP 175 PH GA L PPPSP PT A C S H A R ++P Sbjct: 125 PHRHRRGAVLHPPPPPSPARRPTAALRCPRSPHHRPTAAPRRTQSP 170
>tr|A3BX14|A3BX14_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_027586 PE=4 SV=1 Length = 1391
Score = 34.7 bits (78), Expect = 2.4 Identities = 16/40 (40%), Positives = 17/40 (42%) Frame = -2
Query: 174 GAR*WRLVATATWRQECWQEGARVGYAKGEGGGMTARAAP 55 GAR WR TA WR CW A + G AR P Sbjct: 218 GARPWRTTRTARWRAGCWAPAAPTPPRRARGTACRARRRP 257
>tr|B5DHB8|B5DHB8_DROPS GA25280 OS=Drosophila pseudoobscura pseudoobscura GN=GA25280 PE=4 SV=1 Length = 74
Score = 34.3 bits (77), Expect = 3.2 Identities = 14/30 (46%), Positives = 15/30 (50%) Frame = +2
Query: 2 CSLCAGHCPVCGPHFPSTGAALAVIPPPSP 91 C C CP CGPH P GA V P+P Sbjct: 14 CGPCGTTCPCCGPHSPPCGAPSPVPCSPAP 43
>tr|B4GKJ3|B4GKJ3_DROPE GL26098 OS=Drosophila persimilis GN=GL26098 PE=4 SV=1 Length = 187
Score = 34.3 bits (77), Expect = 3.2 Identities = 14/30 (46%), Positives = 15/30 (50%) Frame = +2
Query: 2 CSLCAGHCPVCGPHFPSTGAALAVIPPPSP 91 C C CP CGPH P GA V P+P Sbjct: 127 CGPCGTTCPCCGPHSPPCGAPSPVPCSPAP 156
>tr|B4GKI5|B4GKI5_DROPE GL26091 OS=Drosophila persimilis GN=GL26091 PE=4 SV=1 Length = 71
Score = 34.3 bits (77), Expect = 3.2 Identities = 14/30 (46%), Positives = 15/30 (50%) Frame = +2
Query: 2 CSLCAGHCPVCGPHFPSTGAALAVIPPPSP 91 C C CP CGPH P GA V P+P Sbjct: 11 CGPCGTTCPCCGPHSPPCGAPSPVPCSPAP 40
>tr|Q84P66|Q84P66_ORYSJ TF-like protein (Fragment) OS=Oryza sativa subsp. japonica PE=2 SV=1 Length = 1017
Score = 33.9 bits (76), Expect = 4.1 Identities = 20/47 (42%), Positives = 22/47 (46%), Gaps = 4/47 (8%) Frame = +2
Query: 8 LC-AGHCPVCGPHF---PSTGAALAVIPPPSPFAYPTLAPSCQHSCL 136 LC +GHCP C + IPPP P PT PSC H CL Sbjct: 463 LCHSGHCPPCLETIFNDLTCACGRTSIPPPLPCGTPT--PSCPHQCL 507
>tr|Q652W3|Q652W3_ORYSJ Putative TF-like protein OS=Oryza sativa subsp. japonica GN=P0046H10.13 PE=4 SV=1 Length = 1117
Score = 33.9 bits (76), Expect = 4.1 Identities = 20/47 (42%), Positives = 22/47 (46%), Gaps = 4/47 (8%) Frame = +2
Query: 8 LC-AGHCPVCGPHF---PSTGAALAVIPPPSPFAYPTLAPSCQHSCL 136 LC +GHCP C + IPPP P PT PSC H CL Sbjct: 548 LCHSGHCPPCLETIFNDLTCACGRTSIPPPLPCGTPT--PSCPHQCL 592
>tr|Q0DD61|Q0DD61_ORYSJ Os06g0252300 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os06g0252300 PE=4 SV=1 Length = 1016
Score = 33.9 bits (76), Expect = 4.1 Identities = 20/47 (42%), Positives = 22/47 (46%), Gaps = 4/47 (8%) Frame = +2
Query: 8 LC-AGHCPVCGPHF---PSTGAALAVIPPPSPFAYPTLAPSCQHSCL 136 LC +GHCP C + IPPP P PT PSC H CL Sbjct: 463 LCHSGHCPPCLETIFNDLTCACGRTSIPPPLPCGTPT--PSCPHQCL 507
>tr|B8B0A0|B8B0A0_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_22395 PE=4 SV=1 Length = 756
Score = 33.9 bits (76), Expect = 4.1 Identities = 20/47 (42%), Positives = 22/47 (46%), Gaps = 4/47 (8%) Frame = +2
Query: 8 LC-AGHCPVCGPHF---PSTGAALAVIPPPSPFAYPTLAPSCQHSCL 136 LC +GHCP C + IPPP P PT PSC H CL Sbjct: 187 LCHSGHCPPCLETIFNDLTCACGRTSIPPPLPCGTPT--PSCPHQCL 231
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