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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP917596
Clone id YMU001_000102_H05
Library
Length 184
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000102_H05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GACATACCGTTTTCTAATACCTTCACACCAAAAGCATCACAGTAAGACTTGGATGATGTC
CATAACATCAATCCCCACATTCTACAACAATGTAGATGCTGTGCTGCCTTTGAGCACACT
TTTGTAGTAATGTAGTTGCTTTGTTGCCTATAATCCCCACAGATTGTAGTGGTGTATATG
CTCT
■■Homology search results ■■ -
sp_hit_id Q86ZK8
Definition sp|Q86ZK8|SEC24_PODAN Protein transport protein SEC24 OS=Podospora anserina
Align length 42
Score (bit) 30.0
E-value 3.7
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917596|Adiantum capillus-veneris mRNA, clone:
YMU001_000102_H05.
         (184 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q86ZK8|SEC24_PODAN Protein transport protein SEC24 OS=Podospo...    30   3.7  

>sp|Q86ZK8|SEC24_PODAN Protein transport protein SEC24 OS=Podospora
           anserina GN=SEC24 PE=3 SV=1
          Length = 946

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = +1

Query: 4   IPFSNTFTPKASQ*DLDD-VHNINPHILQQCRCCAAFEHTFV 126
           +PFS    P A+  DLDD V  +   ++ +CR C ++ + FV
Sbjct: 240 LPFSLVIQPYAALHDLDDPVPVVQDQVISRCRRCRSYINPFV 281
tr_hit_id A7VFB2
Definition tr|A7VFB2|A7VFB2_9CLOT Putative uncharacterized protein OS=Clostridium sp. L2-50
Align length 46
Score (bit) 33.1
E-value 7.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917596|Adiantum capillus-veneris mRNA, clone:
YMU001_000102_H05.
         (184 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7VFB2|A7VFB2_9CLOT Putative uncharacterized protein OS=Clost...    33   7.2  

>tr|A7VFB2|A7VFB2_9CLOT Putative uncharacterized protein
           OS=Clostridium sp. L2-50 GN=CLOL250_01609 PE=3 SV=1
          Length = 331

 Score = 33.1 bits (74), Expect = 7.2
 Identities = 18/46 (39%), Positives = 22/46 (47%)
 Frame = -3

Query: 152 YRQQSNYITTKVCSKAAQHLHCCRMWGLMLWTSSKSYCDAFGVKVL 15
           Y  +S Y  T+ C   A+ L     W L LW S   YC A G+ VL
Sbjct: 122 YEYRSMY-KTRSCKPKAEVLAAATGWHLYLWYSMNRYCGACGMPVL 166