BP917599 |
Clone id |
YMU001_000102_H08 |
Library |
YMU01 |
Length |
475 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000102_H08. |
Accession |
BP917599 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
GTACCTGCAACCATCAAACTGAGCTACAATAAGAGCAACAACACCTGCCTCGGATAGAAG ATTGTCAAAGAAAACATAATCATCCACACAGCCATCAACATGGCTCTCAACCTGTAAGAC CAGCTCACCTGGGTTCTTACACTCACCACAACTAGACTCAAACTCACCAACTGACACATC TCCATCTCCACCTGGAAGAAACGGCTCCTCAACAACAACAAGAGGTAACCCAACCCGTTG CTCTAACTCTTGATTAACAGATTGCAAGTCCGGATACACAGCTTTAAGAGAACACAATCT TTCTTCCTCACATTCCTCGTCTGAGAAAGACTCCTCTCCATCGGTGCTGGACTCGCCATA GTCACCACTGTATCCCATCTCCTGATCACTTTCCGCATACATAACCTCAAGCTCTACAGG CTCTTCAAGGCTAAAAGAGATATCTTTGGTCGAGCTCCATTGTATGAGATACATA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q6AL81 |
Definition |
sp|Q6AL81|DAPAT_DESPS LL-diaminopimelate aminotransferase OS=Desulfotalea psychrophila |
Align length |
31 |
Score (bit) |
32.3 |
E-value |
1.1 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917599|Adiantum capillus-veneris mRNA, clone: YMU001_000102_H08. (475 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q6AL81|DAPAT_DESPS LL-diaminopimelate aminotransferase OS=Des... 32 1.1 sp|Q8TB68|PRR7_HUMAN Proline-rich protein 7 OS=Homo sapiens GN=P... 25 3.4 sp|O77645|STP2_CANFA Nuclear transition protein 2 OS=Canis famil... 30 5.4 sp|P04929|HRPX_PLALO Histidine-rich glycoprotein OS=Plasmodium l... 30 5.4 sp|Q9VJ79|PDE11_DROME Dual 3',5'-cyclic-AMP and -GMP phosphodies... 25 6.5 sp|Q12649|HMDH_PHYBL 3-hydroxy-3-methylglutaryl-coenzyme A reduc... 25 6.6 sp|O94168|SNF1_CANTR Carbon catabolite-derepressing protein kina... 30 7.1 sp|Q09826|SDS23_SCHPO Protein sds23/moc1 OS=Schizosaccharomyces ... 30 7.1 sp|P49907|SEPP1_BOVIN Selenoprotein P OS=Bos taurus GN=SEPP1 PE=... 25 7.1 sp|O43900|PRIC3_HUMAN Prickle-like protein 3 OS=Homo sapiens GN=... 29 9.3 sp|Q9ZMG6|MIAB_HELPJ (Dimethylallyl)adenosine tRNA methylthiotra... 29 9.4
>sp|Q6AL81|DAPAT_DESPS LL-diaminopimelate aminotransferase OS=Desulfotalea psychrophila GN=dapL PE=3 SV=2 Length = 408
Score = 32.3 bits (72), Expect = 1.1 Identities = 16/31 (51%), Positives = 19/31 (61%) Frame = -2
Query: 99 VDGCVDDYVFFDNLLSEAGVVALIVAQFDGC 7 +DG D + FFD LLS+AGVV A F C Sbjct: 349 IDGKTDSWEFFDMLLSKAGVVCTPGAGFGTC 379
>sp|Q8TB68|PRR7_HUMAN Proline-rich protein 7 OS=Homo sapiens GN=PRR7 PE=2 SV=1 Length = 274
Score = 25.4 bits (54), Expect(2) = 3.4 Identities = 9/19 (47%), Positives = 9/19 (47%) Frame = +3
Query: 75 HNHPHSHQHGSQPVRPAHL 131 H HPH H H P HL Sbjct: 112 HAHPHPHHHALPHPPPTHL 130
Score = 23.5 bits (49), Expect(2) = 3.4 Identities = 8/17 (47%), Positives = 10/17 (58%) Frame = +3
Query: 51 RIEDCQRKHNHPHSHQH 101 R+E H+HPH H H Sbjct: 83 RLEAPAHAHSHPHVHVH 99
>sp|O77645|STP2_CANFA Nuclear transition protein 2 OS=Canis familiaris GN=TNP2 PE=2 SV=1 Length = 129
Score = 30.0 bits (66), Expect = 5.4 Identities = 11/17 (64%), Positives = 12/17 (70%) Frame = +3
Query: 333 PLHRCWTRHSHHCIPSP 383 P H+ TRHSHHC P P Sbjct: 72 PRHQKHTRHSHHCPPRP 88
>sp|P04929|HRPX_PLALO Histidine-rich glycoprotein OS=Plasmodium lophurae PE=4 SV=1 Length = 351
Score = 30.0 bits (66), Expect = 5.4 Identities = 12/31 (38%), Positives = 14/31 (45%) Frame = +3
Query: 48 PRIEDCQRKHNHPHSHQHGSQPVRPAHLGSY 140 P E+ H HPH H H P HLG + Sbjct: 88 PHHEEHHHHHPHPHHHHHHHPPHHHHHLGHH 118
>sp|Q9VJ79|PDE11_DROME Dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11 OS=Drosophila melanogaster GN=Pde11 PE=1 SV=4 Length = 1451
Score = 25.4 bits (54), Expect(2) = 6.5 Identities = 9/18 (50%), Positives = 10/18 (55%) Frame = +3
Query: 48 PRIEDCQRKHNHPHSHQH 101 P I + HNH HSH H Sbjct: 1323 PVINNHSHHHNHSHSHNH 1340
Score = 22.3 bits (46), Expect(2) = 6.5 Identities = 8/18 (44%), Positives = 8/18 (44%) Frame = +3
Query: 75 HNHPHSHQHGSQPVRPAH 128 HNH H H H S H Sbjct: 1340 HNHHHHHHHHSHHNHSQH 1357
>sp|Q12649|HMDH_PHYBL 3-hydroxy-3-methylglutaryl-coenzyme A reductase OS=Phycomyces blakesleeanus GN=hmgA PE=3 SV=2 Length = 1176
Score = 25.4 bits (54), Expect(2) = 6.6 Identities = 8/12 (66%), Positives = 9/12 (75%) Frame = +3
Query: 66 QRKHNHPHSHQH 101 +R HNH HSH H Sbjct: 702 KRSHNHHHSHSH 713
Score = 22.3 bits (46), Expect(2) = 6.6 Identities = 7/11 (63%), Positives = 8/11 (72%) Frame = +3
Query: 75 HNHPHSHQHGS 107 H+H HSH H S Sbjct: 709 HSHSHSHNHHS 719
>sp|O94168|SNF1_CANTR Carbon catabolite-derepressing protein kinase OS=Candida tropicalis GN=SNF1 PE=3 SV=1 Length = 619
Score = 29.6 bits (65), Expect = 7.1 Identities = 10/21 (47%), Positives = 12/21 (57%) Frame = +3
Query: 60 DCQRKHNHPHSHQHGSQPVRP 122 D Q H+H H H H QP +P Sbjct: 16 DHQHHHHHHHHHHHSQQPAQP 36
>sp|Q09826|SDS23_SCHPO Protein sds23/moc1 OS=Schizosaccharomyces pombe GN=sds23 PE=1 SV=1 Length = 408
Score = 29.6 bits (65), Expect = 7.1 Identities = 15/51 (29%), Positives = 25/51 (49%) Frame = +3
Query: 264 ASPDTQL*ENTIFLPHIPRLRKTPLHRCWTRHSHHCIPSPDHFPHT*PQAL 416 ++P + E++ F + +L T HR W S C PSP + H P ++ Sbjct: 295 SAPAFNIYESSTFAFTLAKLVATQCHRLWLVQSPSCPPSPKNNAHLSPGSM 345
>sp|P49907|SEPP1_BOVIN Selenoprotein P OS=Bos taurus GN=SEPP1 PE=2 SV=2 Length = 402
Score = 24.6 bits (52), Expect(2) = 7.1 Identities = 6/14 (42%), Positives = 10/14 (71%) Frame = +3
Query: 60 DCQRKHNHPHSHQH 101 + ++H+HPH H H Sbjct: 199 EASQRHHHPHPHSH 212
Score = 23.1 bits (48), Expect(2) = 7.1 Identities = 8/18 (44%), Positives = 8/18 (44%) Frame = +3
Query: 75 HNHPHSHQHGSQPVRPAH 128 H HPH H H P H Sbjct: 212 HPHPHPHPHPHPHPHPHH 229
>sp|O43900|PRIC3_HUMAN Prickle-like protein 3 OS=Homo sapiens GN=PRICKLE3 PE=1 SV=2 Length = 615
Score = 29.3 bits (64), Expect = 9.3 Identities = 11/27 (40%), Positives = 13/27 (48%) Frame = +3
Query: 48 PRIEDCQRKHNHPHSHQHGSQPVRPAH 128 PR +R H+H H H H P R H Sbjct: 505 PRAPSRRRHHHHNHHHHHNRHPSRRRH 531
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B6VML4 |
Definition |
tr|B6VML4|B6VML4_9ENTR Similarities with molybdopterin and thiamine biosynthesis protein OS=Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949 |
Align length |
53 |
Score (bit) |
35.0 |
E-value |
1.9 |
Report |
|