BP917600 |
Clone id |
YMU001_000102_H09 |
Library |
YMU01 |
Length |
405 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000102_H09. |
Accession |
BP917600 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL21Contig1 |
Sequence |
CCTGATCATTGCAGCCCCCTCTGCAATCCTTCTTAAAGCTTCACCTAGGTTGCGGCAGGC ACAAACAAAAGGAATACGAAAGTTGTACTTGTTGATGTGGTTCACATCATCCGCTGGGGT AAGGACCTCACTCTCATCAATGTAATCCACACCAATGGCCTCAAGTACCTGCGCTTCCAC AAAATGCCCAATTCTGGCTTTGGCCATCACAGGAATAGTGACAGCATTCTTGATCTCCTT GATCAAACCAGGATCACTCATGCGAGCCACACCACCCTCAGCCCTGATGTCCGCAGGCAC ACGTTCGAGGGCCATTACGGCAGTAGCGCCTGCCTCTTCCGCAATTCGAGCCTGCTCTGC ATTCACAACATCCATAATAACACCTCCTCGGAGCATCTGAGCAAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9AT63 |
Definition |
sp|Q9AT63|PDX1_GINBI Probable pyridoxal biosynthesis protein PDX1 OS=Ginkgo biloba |
Align length |
135 |
Score (bit) |
251.0 |
E-value |
8.0e-67 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TIQ8 |
Definition |
tr|A9TIQ8|A9TIQ8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
135 |
Score (bit) |
246.0 |
E-value |
4.0e-64 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917600|Adiantum capillus-veneris mRNA, clone: YMU001_000102_H09. (405 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TIQ8|A9TIQ8_PHYPA Predicted protein OS=Physcomitrella paten... 246 4e-64 tr|A9S7G3|A9S7G3_PHYPA Predicted protein OS=Physcomitrella paten... 246 5e-64 tr|A9RLD0|A9RLD0_PHYPA Predicted protein OS=Physcomitrella paten... 242 6e-63 tr|A9TWQ5|A9TWQ5_PHYPA Predicted protein OS=Physcomitrella paten... 241 1e-62 tr|Q6QND3|Q6QND3_TOBAC Putative pyridoxine biosynthesis protein ... 241 2e-62 tr|A2QGS0|A2QGS0_ASPNC Contig An03c0120, complete genome OS=Aspe... 238 9e-62 tr|Q45FF1|Q45FF1_LOTJA Pyridoxine biosynthesis protein OS=Lotus ... 238 1e-61 tr|Q45FF0|Q45FF0_SOYBN Pyridoxine biosynthesis protein OS=Glycin... 236 3e-61 tr|B6SJQ3|B6SJQ3_MAIZE Putative uncharacterized protein OS=Zea m... 236 3e-61 tr|B4FRZ2|B4FRZ2_MAIZE Putative uncharacterized protein OS=Zea m... 236 3e-61 tr|B4FQA2|B4FQA2_MAIZE Putative uncharacterized protein OS=Zea m... 236 3e-61 tr|Q45FF2|Q45FF2_MEDTR Pyridoxine biosynthesis protein OS=Medica... 236 4e-61 tr|Q0CDB7|Q0CDB7_ASPTN Pyridoxine biosynthesis protein PDX1 OS=A... 236 6e-61 tr|Q53NW9|Q53NW9_ORYSJ Os11g0708500 protein OS=Oryza sativa subs... 235 1e-60 tr|B7E5L2|B7E5L2_ORYSJ cDNA clone:006-203-B11, full insert seque... 234 2e-60 tr|A2YH94|A2YH94_ORYSI Putative uncharacterized protein OS=Oryza... 234 2e-60 tr|Q2U7S1|Q2U7S1_ASPOR Stationary phase-induced protein OS=Asper... 234 2e-60 tr|B8NEJ0|B8NEJ0_ASPFL Pyridoxine biosynthesis protein OS=Asperg... 234 2e-60 tr|Q4WUD7|Q4WUD7_ASPFU Pyridoxine biosynthesis protein OS=Asperg... 234 2e-60 tr|B0Y3W1|B0Y3W1_ASPFC Pyridoxine biosynthesis protein OS=Asperg... 234 2e-60 tr|A1DF23|A1DF23_NEOFI Pyridoxine biosynthesis protein OS=Neosar... 234 2e-60 tr|A6R037|A6R037_AJECN Pyridoxal biosynthesis lyase pdxS OS=Ajel... 233 4e-60 tr|B6HQD1|B6HQD1_PENCH Pc22g15930 protein OS=Penicillium chrysog... 233 5e-60 tr|A1CAP7|A1CAP7_ASPCL Pyridoxine biosynthesis protein OS=Asperg... 232 6e-60 tr|A8NFX3|A8NFX3_COPC7 Putative uncharacterized protein OS=Copri... 231 1e-59 tr|Q3S861|Q3S861_WHEAT Pyridoxine biosynthesis protein OS=Tritic... 231 1e-59 tr|B8G663|B8G663_9CHLR Pyridoxine biosynthesis protein OS=Chloro... 231 2e-59 tr|B2QH76|B2QH76_9CHLR Pyridoxine biosynthesis protein OS=Chloro... 230 2e-59 tr|A8Q0B9|A8Q0B9_MALGO Putative uncharacterized protein OS=Malas... 229 4e-59 tr|B7E4V8|B7E4V8_ORYSJ cDNA clone:001-007-G11, full insert seque... 229 5e-59
>tr|A9TIQ8|A9TIQ8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_170297 PE=4 SV=1 Length = 315
Score = 246 bits (628), Expect = 4e-64 Identities = 125/135 (92%), Positives = 130/135 (96%) Frame = -1
Query: 405 LAQMLRGGVIMDVVNAEQARIAEEAGATAVMALERVPADIRAEGGVARMSDPGLIKEIKN 226 LAQMLRGGVIMDVV+A QARIAEEAGA AVMALERVPADIRAEGGVARMSDP +IKEIK Sbjct: 35 LAQMLRGGVIMDVVDANQARIAEEAGAVAVMALERVPADIRAEGGVARMSDPAMIKEIKK 94
Query: 225 AVTIPVMAKARIGHFVEAQVLEAIGVDYIDESEVLTPADDVNHINKYNFRIPFVCACRNL 46 AVTIPVMAKARIGHFVEAQ+LEAIGVDYIDESEVLTPADDVNHINK+N+RIPFVC CRNL Sbjct: 95 AVTIPVMAKARIGHFVEAQILEAIGVDYIDESEVLTPADDVNHINKHNYRIPFVCGCRNL 154
Query: 45 GEALRRIAEGAAMIR 1 GEALRRIAEGAAMIR Sbjct: 155 GEALRRIAEGAAMIR 169
>tr|A9S7G3|A9S7G3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_181982 PE=4 SV=1 Length = 314
Score = 246 bits (627), Expect = 5e-64 Identities = 125/135 (92%), Positives = 130/135 (96%) Frame = -1
Query: 405 LAQMLRGGVIMDVVNAEQARIAEEAGATAVMALERVPADIRAEGGVARMSDPGLIKEIKN 226 LAQMLRGGVIMDVV+A QARIAEEAGA AVMALERVPADIRAEGGVARMSDP +IKEIK Sbjct: 34 LAQMLRGGVIMDVVDAAQARIAEEAGAVAVMALERVPADIRAEGGVARMSDPSMIKEIKK 93
Query: 225 AVTIPVMAKARIGHFVEAQVLEAIGVDYIDESEVLTPADDVNHINKYNFRIPFVCACRNL 46 AVTIPVMAKARIGHFVEAQ+LEAIGVDYIDESEVLTPADDVNHINK+N+RIPFVC CRNL Sbjct: 94 AVTIPVMAKARIGHFVEAQILEAIGVDYIDESEVLTPADDVNHINKHNYRIPFVCGCRNL 153
Query: 45 GEALRRIAEGAAMIR 1 GEALRRIAEGAAMIR Sbjct: 154 GEALRRIAEGAAMIR 168
>tr|A9RLD0|A9RLD0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_176118 PE=4 SV=1 Length = 313
Score = 242 bits (618), Expect = 6e-63 Identities = 123/135 (91%), Positives = 129/135 (95%) Frame = -1
Query: 405 LAQMLRGGVIMDVVNAEQARIAEEAGATAVMALERVPADIRAEGGVARMSDPGLIKEIKN 226 LAQMLRGGVIMDVV+ QARIAEEAGA AVMALERVPADIRAEGGVARMSDP +IKEIK Sbjct: 33 LAQMLRGGVIMDVVDVAQARIAEEAGAVAVMALERVPADIRAEGGVARMSDPSMIKEIKK 92
Query: 225 AVTIPVMAKARIGHFVEAQVLEAIGVDYIDESEVLTPADDVNHINKYNFRIPFVCACRNL 46 AVTIPVMAKARIGHFVEAQ+LEAIGVDYIDESEVLTPADDV+HINK+N+RIPFVC CRNL Sbjct: 93 AVTIPVMAKARIGHFVEAQILEAIGVDYIDESEVLTPADDVHHINKHNYRIPFVCGCRNL 152
Query: 45 GEALRRIAEGAAMIR 1 GEALRRIAEGAAMIR Sbjct: 153 GEALRRIAEGAAMIR 167
>tr|A9TWQ5|A9TWQ5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_226199 PE=4 SV=1 Length = 315
Score = 241 bits (616), Expect = 1e-62 Identities = 125/136 (91%), Positives = 130/136 (95%), Gaps = 1/136 (0%) Frame = -1
Query: 405 LAQMLRGGVIMDVVNAEQARIAEEAGATAVMALERVPADIRAEGGVARMSDPGLIKEIKN 226 LAQMLRGGVIMDVV+A QARIAEEAGA AVMALERVPADIRAEGGVARMSDP +IKEIK Sbjct: 34 LAQMLRGGVIMDVVDANQARIAEEAGAVAVMALERVPADIRAEGGVARMSDPSMIKEIKK 93
Query: 225 AVTIPVMAKARI-GHFVEAQVLEAIGVDYIDESEVLTPADDVNHINKYNFRIPFVCACRN 49 AVTIPVMAKARI GHFVEAQ+LEAIGVDYIDESEVLTPADDVNHINK+N+RIPFVC CRN Sbjct: 94 AVTIPVMAKARIAGHFVEAQILEAIGVDYIDESEVLTPADDVNHINKHNYRIPFVCGCRN 153
Query: 48 LGEALRRIAEGAAMIR 1 LGEALRRIAEGAAMIR Sbjct: 154 LGEALRRIAEGAAMIR 169
>tr|Q6QND3|Q6QND3_TOBAC Putative pyridoxine biosynthesis protein isoform B (Putative pyridoxine biosynthesis protein isoform A) OS=Nicotiana tabacum GN=Pdx1-B PE=4 SV=1 Length = 309
Score = 241 bits (614), Expect = 2e-62 Identities = 123/135 (91%), Positives = 128/135 (94%) Frame = -1
Query: 405 LAQMLRGGVIMDVVNAEQARIAEEAGATAVMALERVPADIRAEGGVARMSDPGLIKEIKN 226 LAQMLRGGVIMDVVNAEQARIAEEAGA AVMALERVPADIRA+GGVARMSDP LIKEIK Sbjct: 30 LAQMLRGGVIMDVVNAEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKEIKQ 89
Query: 225 AVTIPVMAKARIGHFVEAQVLEAIGVDYIDESEVLTPADDVNHINKYNFRIPFVCACRNL 46 AVTIPVMAKARIGHFVEAQ+LEAIG+DY+DESEVLT ADD NHINK+NFRIPFVC CRNL Sbjct: 90 AVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTLADDENHINKHNFRIPFVCGCRNL 149
Query: 45 GEALRRIAEGAAMIR 1 GEALRRI EGAAMIR Sbjct: 150 GEALRRIREGAAMIR 164
>tr|A2QGS0|A2QGS0_ASPNC Contig An03c0120, complete genome OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=An03g04280 PE=4 SV=1 Length = 309
Score = 238 bits (608), Expect = 9e-62 Identities = 119/135 (88%), Positives = 128/135 (94%) Frame = -1
Query: 405 LAQMLRGGVIMDVVNAEQARIAEEAGATAVMALERVPADIRAEGGVARMSDPGLIKEIKN 226 LAQML+GGVIMDVVNAEQARIAEEAGA AVMALERVPADIRA GGVARMSDPG+IKEI+ Sbjct: 22 LAQMLKGGVIMDVVNAEQARIAEEAGAAAVMALERVPADIRATGGVARMSDPGMIKEIQK 81
Query: 225 AVTIPVMAKARIGHFVEAQVLEAIGVDYIDESEVLTPADDVNHINKYNFRIPFVCACRNL 46 AVTIPVMAKARIGHFVE Q+LEAIGVDYIDESEVLTPADDV H+ K+NF++PFVC CRNL Sbjct: 82 AVTIPVMAKARIGHFVECQILEAIGVDYIDESEVLTPADDVYHVTKHNFKVPFVCGCRNL 141
Query: 45 GEALRRIAEGAAMIR 1 GEALRRI+EGAAMIR Sbjct: 142 GEALRRISEGAAMIR 156
>tr|Q45FF1|Q45FF1_LOTJA Pyridoxine biosynthesis protein OS=Lotus japonicus PE=2 SV=1 Length = 310
Score = 238 bits (606), Expect = 1e-61 Identities = 121/135 (89%), Positives = 128/135 (94%) Frame = -1
Query: 405 LAQMLRGGVIMDVVNAEQARIAEEAGATAVMALERVPADIRAEGGVARMSDPGLIKEIKN 226 LAQMLRGGVIMDVVNA+QARIAEEAGA AVMALERVPADIRA+GGVARMSDP LIKEIK Sbjct: 30 LAQMLRGGVIMDVVNAQQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKEIKQ 89
Query: 225 AVTIPVMAKARIGHFVEAQVLEAIGVDYIDESEVLTPADDVNHINKYNFRIPFVCACRNL 46 AVTIPVMAKARIGHFVEAQ+LEAIGVDY+DESEVLT AD+ NHINK+NFRIPFVC CRNL Sbjct: 90 AVTIPVMAKARIGHFVEAQILEAIGVDYVDESEVLTLADEDNHINKHNFRIPFVCGCRNL 149
Query: 45 GEALRRIAEGAAMIR 1 GEALRR+ EGAAMIR Sbjct: 150 GEALRRVREGAAMIR 164
>tr|Q45FF0|Q45FF0_SOYBN Pyridoxine biosynthesis protein OS=Glycine max PE=2 SV=1 Length = 311
Score = 236 bits (603), Expect = 3e-61 Identities = 120/135 (88%), Positives = 127/135 (94%) Frame = -1
Query: 405 LAQMLRGGVIMDVVNAEQARIAEEAGATAVMALERVPADIRAEGGVARMSDPGLIKEIKN 226 LAQMLRGGVIMDVV+AEQARIAEEAGA AVMALERVPADIRA+GGVARMSDP LI +IK Sbjct: 31 LAQMLRGGVIMDVVDAEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLINDIKR 90
Query: 225 AVTIPVMAKARIGHFVEAQVLEAIGVDYIDESEVLTPADDVNHINKYNFRIPFVCACRNL 46 AVTIPVMAKARIGHFVEAQ+LEAIG+DY+DESEVLT ADD NHINK+NFRIPFVC CRNL Sbjct: 91 AVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTLADDANHINKHNFRIPFVCGCRNL 150
Query: 45 GEALRRIAEGAAMIR 1 GEALRRI EGAAMIR Sbjct: 151 GEALRRIREGAAMIR 165
>tr|B6SJQ3|B6SJQ3_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 317
Score = 236 bits (603), Expect = 3e-61 Identities = 116/135 (85%), Positives = 128/135 (94%) Frame = -1
Query: 405 LAQMLRGGVIMDVVNAEQARIAEEAGATAVMALERVPADIRAEGGVARMSDPGLIKEIKN 226 LAQMLRGGVIMDVV EQAR+AEEAGA AVMALERVPADIRA+GGVARMSDPGLI++IK Sbjct: 37 LAQMLRGGVIMDVVTPEQARLAEEAGACAVMALERVPADIRAQGGVARMSDPGLIRDIKR 96
Query: 225 AVTIPVMAKARIGHFVEAQVLEAIGVDYIDESEVLTPADDVNHINKYNFRIPFVCACRNL 46 AVTIPVMAKARIGHFVEAQ+LEA+GVDY+DESEVLTPADD +HINK+NFR+PFVC CR+L Sbjct: 97 AVTIPVMAKARIGHFVEAQILEAVGVDYVDESEVLTPADDAHHINKHNFRVPFVCGCRDL 156
Query: 45 GEALRRIAEGAAMIR 1 GEALRR+ EGAAMIR Sbjct: 157 GEALRRVREGAAMIR 171
>tr|B4FRZ2|B4FRZ2_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 317
Score = 236 bits (603), Expect = 3e-61 Identities = 116/135 (85%), Positives = 128/135 (94%) Frame = -1
Query: 405 LAQMLRGGVIMDVVNAEQARIAEEAGATAVMALERVPADIRAEGGVARMSDPGLIKEIKN 226 LAQMLRGGVIMDVV EQAR+AEEAGA AVMALERVPADIRA+GGVARMSDPGLI++IK Sbjct: 37 LAQMLRGGVIMDVVTPEQARLAEEAGACAVMALERVPADIRAQGGVARMSDPGLIRDIKR 96
Query: 225 AVTIPVMAKARIGHFVEAQVLEAIGVDYIDESEVLTPADDVNHINKYNFRIPFVCACRNL 46 AVTIPVMAKARIGHFVEAQ+LEA+GVDY+DESEVLTPADD +HINK+NFR+PFVC CR+L Sbjct: 97 AVTIPVMAKARIGHFVEAQILEAVGVDYVDESEVLTPADDAHHINKHNFRVPFVCGCRDL 156
Query: 45 GEALRRIAEGAAMIR 1 GEALRR+ EGAAMIR Sbjct: 157 GEALRRVREGAAMIR 171
|